RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 C17orf53Q8N3J3 647 aaPredicted RBP20.99■□□□□ 0.95
SMARCC1-201ENST00000254480 JAK2O60674 1132 aa20.98■□□□□ 0.95
SMARCC1-201ENST00000254480 MYL5Q02045 173 aa20.98■□□□□ 0.95
SMARCC1-201ENST00000254480 ZBTB16Q05516 673 aa20.98■□□□□ 0.95
SMARCC1-201ENST00000254480 TBC1D8BQ0IIM8 1120 aa20.98■□□□□ 0.95
SMARCC1-201ENST00000254480 DIS3L2Q8IYB7 885 aaKnown RBP20.98■□□□□ 0.95
SMARCC1-201ENST00000254480 RASA3Q14644 834 aa20.98■□□□□ 0.95
SMARCC1-201ENST00000254480 BAG1Q99933 345 aaPredicted RBP20.98■□□□□ 0.95
SMARCC1-201ENST00000254480 KCNH3Q9ULD8 1083 aa20.98■□□□□ 0.95
SMARCC1-201ENST00000254480 TRIM35Q9UPQ4 493 aa20.98■□□□□ 0.95
SMARCC1-201ENST00000254480 PRPHP41219 470 aa20.98■□□□□ 0.95
SMARCC1-201ENST00000254480 ZNF532Q9HCE3 1301 aa20.98■□□□□ 0.95
SMARCC1-201ENST00000254480 NDC80O14777 642 aa20.98■□□□□ 0.95
SMARCC1-201ENST00000254480 DEXIO95424 95 aa20.98■□□□□ 0.95
SMARCC1-201ENST00000254480 MRPL12P52815 198 aaKnown RBP20.98■□□□□ 0.95
SMARCC1-201ENST00000254480 C6orf163Q5TEZ5 329 aa20.98■□□□□ 0.95
SMARCC1-201ENST00000254480 KCNQ3O43525 872 aa20.98■□□□□ 0.95
SMARCC1-201ENST00000254480 LARGE2Q8N3Y3 721 aa20.98■□□□□ 0.95
SMARCC1-201ENST00000254480 UBLCP1Q8WVY7 318 aaPredicted RBP20.97■□□□□ 0.95
SMARCC1-201ENST00000254480 ANGEL1Q9UNK9 670 aaKnown RBP20.97■□□□□ 0.95
SMARCC1-201ENST00000254480 BICRAQ9NZM4 1560 aa20.97■□□□□ 0.95
SMARCC1-201ENST00000254480 APPBP2Q92624 585 aa20.97■□□□□ 0.95
SMARCC1-201ENST00000254480 RAD50Q92878 1312 aa20.97■□□□□ 0.95
SMARCC1-201ENST00000254480 B4DLN1 442 aa20.97■□□□□ 0.95
SMARCC1-201ENST00000254480 EPB41P11171 864 aaKnown RBP20.97■□□□□ 0.95
SMARCC1-201ENST00000254480 IGSF22Q8N9C0 903 aa20.97■□□□□ 0.95
SMARCC1-201ENST00000254480 CCDC77Q9BR77 488 aa20.97■□□□□ 0.95
SMARCC1-201ENST00000254480 AKR1B15C9JRZ8 316 aaPredicted RBP20.97■□□□□ 0.95
SMARCC1-201ENST00000254480 FAM160A1Q05DH4 1040 aa20.97■□□□□ 0.95
SMARCC1-201ENST00000254480 BEND3Q5T5X7 828 aa20.97■□□□□ 0.95
SMARCC1-201ENST00000254480 ZNF496Q96IT1 587 aaPredicted RBP20.97■□□□□ 0.95
SMARCC1-201ENST00000254480 PSMB7Q99436 277 aa20.97■□□□□ 0.95
SMARCC1-201ENST00000254480 RBSNQ9H1K0 784 aa20.97■□□□□ 0.95
SMARCC1-201ENST00000254480 NELFCDQ8IXH7 590 aa20.97■□□□□ 0.95
SMARCC1-201ENST00000254480 PSMC4P43686 418 aa20.96■□□□□ 0.95
SMARCC1-201ENST00000254480 BLZF1Q9H2G9 400 aa20.96■□□□□ 0.95
SMARCC1-201ENST00000254480 TMOD4Q9NZQ9 345 aa20.96■□□□□ 0.95
SMARCC1-201ENST00000254480 GADD45BO75293 160 aaPredicted RBP20.96■□□□□ 0.95
SMARCC1-201ENST00000254480 SPATA5Q8NB90 893 aa20.96■□□□□ 0.95
SMARCC1-201ENST00000254480 MAK16Q9BXY0 300 aaKnown RBP20.96■□□□□ 0.95
SMARCC1-201ENST00000254480 ATP2A1O14983 1001 aa20.95■□□□□ 0.94
SMARCC1-201ENST00000254480 NSMFQ6X4W1 530 aa20.95■□□□□ 0.94
SMARCC1-201ENST00000254480 PPP1R21Q6ZMI0 780 aa20.95■□□□□ 0.94
SMARCC1-201ENST00000254480 PLEKHA4Q9H4M7 779 aa20.95■□□□□ 0.94
SMARCC1-201ENST00000254480 STK32BQ9NY57 414 aa20.95■□□□□ 0.94
SMARCC1-201ENST00000254480 TEX14Q8IWB6 1497 aa20.95■□□□□ 0.94
SMARCC1-201ENST00000254480 CFBP00751 764 aa20.95■□□□□ 0.94
SMARCC1-201ENST00000254480 CAPN2P17655 700 aa20.95■□□□□ 0.94
SMARCC1-201ENST00000254480 MNAT1P51948 309 aa20.95■□□□□ 0.94
SMARCC1-201ENST00000254480 PPM1EQ8WY54 764 aa20.95■□□□□ 0.94
SMARCC1-201ENST00000254480 INTS4Q96HW7 963 aaKnown RBP20.95■□□□□ 0.94
SMARCC1-201ENST00000254480 CDC37L1Q7L3B6 337 aa20.95■□□□□ 0.94
SMARCC1-201ENST00000254480 CCDC87Q9NVE4 849 aa20.95■□□□□ 0.94
SMARCC1-201ENST00000254480 TRPM2O94759 1503 aa20.95■□□□□ 0.94
SMARCC1-201ENST00000254480 HSPA4P34932 840 aa20.95■□□□□ 0.94
SMARCC1-201ENST00000254480 ZFYVE9O95405 1425 aa20.95■□□□□ 0.94
SMARCC1-201ENST00000254480 SLC1A4P43007 532 aa20.95■□□□□ 0.94
SMARCC1-201ENST00000254480 ARHGEF10LQ9HCE6 1279 aa20.95■□□□□ 0.94
SMARCC1-201ENST00000254480 VPS54Q9P1Q0 977 aa20.95■□□□□ 0.94
SMARCC1-201ENST00000254480 AGTPBP1Q9UPW5 1226 aa20.95■□□□□ 0.94
SMARCC1-201ENST00000254480 ITSN2Q9NZM3 1697 aa20.95■□□□□ 0.94
SMARCC1-201ENST00000254480 RPL13P26373 211 aaKnown RBP20.94■□□□□ 0.94
SMARCC1-201ENST00000254480 NUP160Q12769 1436 aa20.94■□□□□ 0.94
SMARCC1-201ENST00000254480 TTC38Q5R3I4 469 aa20.94■□□□□ 0.94
SMARCC1-201ENST00000254480 SREK1Q8WXA9 508 aaKnown RBP20.94■□□□□ 0.94
SMARCC1-201ENST00000254480 SPOPO43791 374 aa20.94■□□□□ 0.94
SMARCC1-201ENST00000254480 TRIM31Q9BZY9 425 aa20.94■□□□□ 0.94
SMARCC1-201ENST00000254480 TXNDC16Q9P2K2 825 aa20.94■□□□□ 0.94
SMARCC1-201ENST00000254480 NOD1Q9Y239 953 aa20.94■□□□□ 0.94
SMARCC1-201ENST00000254480 SF3A3Q12874 501 aaKnown RBP eCLIP20.94■□□□□ 0.942e-6■■■■□ 20.8
SMARCC1-201ENST00000254480 GCKRQ14397 625 aa20.94■□□□□ 0.94
SMARCC1-201ENST00000254480 WDR44Q5JSH3 913 aa20.94■□□□□ 0.94
SMARCC1-201ENST00000254480 CSGALNACT2Q8N6G5 542 aa20.94■□□□□ 0.94
SMARCC1-201ENST00000254480 GTF3C6Q969F1 213 aa20.94■□□□□ 0.94
SMARCC1-201ENST00000254480 LRRC45Q96CN5 670 aa20.94■□□□□ 0.94
SMARCC1-201ENST00000254480 PARP10Q53GL7 1025 aa20.94■□□□□ 0.94
SMARCC1-201ENST00000254480 OPA1O60313 960 aa20.93■□□□□ 0.94
SMARCC1-201ENST00000254480 RILPL1Q5EBL4 403 aa20.93■□□□□ 0.94
SMARCC1-201ENST00000254480 TMEM87BQ96K49 555 aa20.93■□□□□ 0.94
SMARCC1-201ENST00000254480 RABEP2Q9H5N1 569 aa20.93■□□□□ 0.94
SMARCC1-201ENST00000254480 TRMT44Q8IYL2 757 aaKnown RBP20.93■□□□□ 0.94
SMARCC1-201ENST00000254480 SNX29Q8TEQ0 813 aa20.93■□□□□ 0.94
SMARCC1-201ENST00000254480 UHRF1BP1Q6BDS2 1440 aa20.93■□□□□ 0.94
SMARCC1-201ENST00000254480 PPP2R5DQ14738 602 aa20.93■□□□□ 0.94
SMARCC1-201ENST00000254480 NOP56O00567 594 aaKnown RBP20.93■□□□□ 0.94
SMARCC1-201ENST00000254480 HGSO14964 777 aaPredicted RBP20.93■□□□□ 0.94
SMARCC1-201ENST00000254480 TNFAIP3P21580 790 aa20.93■□□□□ 0.94
SMARCC1-201ENST00000254480 RAB3IL1Q8TBN0 382 aa20.93■□□□□ 0.94
SMARCC1-201ENST00000254480 RNF34Q969K3 372 aa20.93■□□□□ 0.94
SMARCC1-201ENST00000254480 FAM169AQ9Y6X4 670 aa20.93■□□□□ 0.94
SMARCC1-201ENST00000254480 UTP14CQ5TAP6 766 aaKnown RBP20.93■□□□□ 0.94
SMARCC1-201ENST00000254480 PLCD1P51178 756 aa20.92■□□□□ 0.94
SMARCC1-201ENST00000254480 NSRP1Q9H0G5 558 aaKnown RBP20.92■□□□□ 0.94
SMARCC1-201ENST00000254480 TAB2Q9NYJ8 693 aa20.92■□□□□ 0.94
SMARCC1-201ENST00000254480 H0YIN7 160 aa20.92■□□□□ 0.94
SMARCC1-201ENST00000254480 RDH13Q8NBN7 331 aa20.92■□□□□ 0.94
SMARCC1-201ENST00000254480 ARHGEF35A5YM69 484 aa20.92■□□□□ 0.94
SMARCC1-201ENST00000254480 KIFC2Q96AC6 838 aa20.92■□□□□ 0.94
SMARCC1-201ENST00000254480 PER1O15534 1290 aaPredicted RBP20.92■□□□□ 0.94
SMARCC1-201ENST00000254480 LPIN2Q92539 896 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms