RNA–Protein interactions for RNA: ENST00000254181.8

USP29-201, Transcript of ubiquitin specific peptidase 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP29, Length 3,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-201ENST00000254181 RHBDL2Q9NX52 303 aa8.62□□□□□ -1.03
USP29-201ENST00000254181 ATF5Q9Y2D1 282 aaPredicted RBP8.62□□□□□ -1.03
USP29-201ENST00000254181 CLTAP09496 248 aa8.62□□□□□ -1.03
USP29-201ENST00000254181 SDSP20132 328 aa8.62□□□□□ -1.03
USP29-201ENST00000254181 IRAK1P51617 712 aa8.62□□□□□ -1.03
USP29-201ENST00000254181 SLC5A9Q2M3M2 681 aa8.62□□□□□ -1.03
USP29-201ENST00000254181 CERKQ8TCT0 537 aa8.62□□□□□ -1.03
USP29-201ENST00000254181 RIN2Q8WYP3 895 aaPredicted RBP8.62□□□□□ -1.03
USP29-201ENST00000254181 RUNDC1Q96C34 613 aa8.62□□□□□ -1.03
USP29-201ENST00000254181 INTUQ9ULD6 942 aa8.62□□□□□ -1.03
USP29-201ENST00000254181 SLC45A1Q9Y2W3 748 aa8.62□□□□□ -1.03
USP29-201ENST00000254181 RAD54L2Q9Y4B4 1467 aa8.61□□□□□ -1.03
USP29-201ENST00000254181 GOLGA6L10A0A0M3HER8 536 aa8.61□□□□□ -1.03
USP29-201ENST00000254181 BOLA2-SMG1P6H3BVE0 249 aa8.61□□□□□ -1.03
USP29-201ENST00000254181 GJB2P29033 226 aa8.61□□□□□ -1.03
USP29-201ENST00000254181 IQCB1Q15051 598 aa8.61□□□□□ -1.03
USP29-201ENST00000254181 Q4G0T1 1027 aa8.61□□□□□ -1.03
USP29-201ENST00000254181 RELL1Q8IUW5 271 aa8.61□□□□□ -1.03
USP29-201ENST00000254181 LMNTD2Q8IXW0 634 aa8.61□□□□□ -1.03
USP29-201ENST00000254181 EPAS1Q99814 870 aa8.61□□□□□ -1.03
USP29-201ENST00000254181 PPP1R12CQ9BZL4 782 aa8.61□□□□□ -1.03
USP29-201ENST00000254181 SCAND2PQ9GZW5 306 aaPredicted RBP8.61□□□□□ -1.03
USP29-201ENST00000254181 PER1O15534 1290 aaPredicted RBP8.61□□□□□ -1.03
USP29-201ENST00000254181 MCM3P25205 808 aa8.61□□□□□ -1.03
USP29-201ENST00000254181 RASSF7Q02833 373 aa8.61□□□□□ -1.03
USP29-201ENST00000254181 TRPC6Q9Y210 931 aa8.61□□□□□ -1.03
USP29-201ENST00000254181 KDM5BQ9UGL1 1544 aa8.61□□□□□ -1.03
USP29-201ENST00000254181 TLDC2A0PJX2 215 aa8.6□□□□□ -1.03
USP29-201ENST00000254181 PABPN1LA6NDY0 278 aaKnown RBP8.6□□□□□ -1.03
USP29-201ENST00000254181 FERP16591 822 aa8.6□□□□□ -1.03
USP29-201ENST00000254181 MPP3Q13368 585 aa8.6□□□□□ -1.03
USP29-201ENST00000254181 CCDC57Q2TAC2 916 aa8.6□□□□□ -1.03
USP29-201ENST00000254181 KBTBD12Q3ZCT8 623 aa8.6□□□□□ -1.03
USP29-201ENST00000254181 TCERG1LQ5VWI1 586 aa8.6□□□□□ -1.03
USP29-201ENST00000254181 PRPF40BQ6NWY9 871 aaKnown RBP8.6□□□□□ -1.03
USP29-201ENST00000254181 HDGFL2Q7Z4V5 671 aaPredicted RBP8.6□□□□□ -1.03
USP29-201ENST00000254181 C16orf71Q8IYS4 520 aaPredicted RBP8.6□□□□□ -1.03
USP29-201ENST00000254181 NEK9Q8TD19 979 aa8.6□□□□□ -1.03
USP29-201ENST00000254181 HOOK2Q96ED9 719 aa8.6□□□□□ -1.03
USP29-201ENST00000254181 SEC62Q99442 399 aaKnown RBP8.6□□□□□ -1.03
USP29-201ENST00000254181 FUCA2Q9BTY2 467 aa8.6□□□□□ -1.03
USP29-201ENST00000254181 THRAP3Q9Y2W1 955 aaKnown RBP8.6□□□□□ -1.03
USP29-201ENST00000254181 ABCA5Q8WWZ7 1642 aa8.6□□□□□ -1.03
USP29-201ENST00000254181 ANKRD30BQ9BXX2 1392 aa8.6□□□□□ -1.03
USP29-201ENST00000254181 RPRD2Q5VT52 1461 aaKnown RBP8.6□□□□□ -1.03
USP29-201ENST00000254181 AHCYL1O43865 530 aa8.6□□□□□ -1.03
USP29-201ENST00000254181 MTA2O94776 668 aa8.6□□□□□ -1.03
USP29-201ENST00000254181 PARP1P09874 1014 aaKnown RBP8.6□□□□□ -1.03
USP29-201ENST00000254181 ERCC5P28715 1186 aaPredicted RBP8.6□□□□□ -1.03
USP29-201ENST00000254181 SMTNP53814 917 aa8.6□□□□□ -1.03
USP29-201ENST00000254181 PDCLQ13371 301 aa8.6□□□□□ -1.03
USP29-201ENST00000254181 CCDC93Q567U6 631 aa8.6□□□□□ -1.03
USP29-201ENST00000254181 HIBCHQ6NVY1 386 aaPredicted RBP8.6□□□□□ -1.03
USP29-201ENST00000254181 SRGAP1Q7Z6B7 1085 aa8.6□□□□□ -1.03
USP29-201ENST00000254181 NDUFAF2Q8N183 169 aa8.6□□□□□ -1.03
USP29-201ENST00000254181 EHD4Q9H223 541 aa8.6□□□□□ -1.03
USP29-201ENST00000254181 MRGBPQ9NV56 204 aa8.6□□□□□ -1.03
USP29-201ENST00000254181 HAUS2Q9NVX0 235 aa8.6□□□□□ -1.03
USP29-201ENST00000254181 MYO1AQ9UBC5 1043 aa8.6□□□□□ -1.03
USP29-201ENST00000254181 EVLQ9UI08 416 aaPredicted RBP8.6□□□□□ -1.03
USP29-201ENST00000254181 PAIP2BQ9ULR5 123 aaKnown RBP8.6□□□□□ -1.03
USP29-201ENST00000254181 PCDHGA4Q9Y5G9 962 aa8.6□□□□□ -1.03
USP29-201ENST00000254181 N6AMT1Q9Y5N5 214 aa8.6□□□□□ -1.03
USP29-201ENST00000254181 A0A087WWV3 80 aa8.6□□□□□ -1.03
USP29-201ENST00000254181 BIN1O00499 593 aa8.6□□□□□ -1.03
USP29-201ENST00000254181 PRC1O43663 620 aa8.6□□□□□ -1.03
USP29-201ENST00000254181 LGR5O75473 907 aa8.6□□□□□ -1.03
USP29-201ENST00000254181 CTCFP49711 727 aaPredicted RBP8.6□□□□□ -1.03
USP29-201ENST00000254181 IFFO1Q0D2I5 559 aa8.6□□□□□ -1.03
USP29-201ENST00000254181 TBC1D10BQ4KMP7 808 aaPredicted RBP8.6□□□□□ -1.03
USP29-201ENST00000254181 CYB5D1Q6P9G0 228 aa8.6□□□□□ -1.03
USP29-201ENST00000254181 SAPCD2Q86UD0 394 aa8.6□□□□□ -1.03
USP29-201ENST00000254181 RBM12BQ8IXT5 1001 aaKnown RBP8.6□□□□□ -1.03
USP29-201ENST00000254181 ABTB1Q969K4 478 aaPredicted RBP8.6□□□□□ -1.03
USP29-201ENST00000254181 XPO4Q9C0E2 1151 aaKnown RBP8.6□□□□□ -1.03
USP29-201ENST00000254181 IMPACTQ9P2X3 320 aa8.6□□□□□ -1.03
USP29-201ENST00000254181 TBC1D2BQ9UPU7 963 aa8.6□□□□□ -1.03
USP29-201ENST00000254181 PTPRKQ15262 1439 aa8.6□□□□□ -1.03
USP29-201ENST00000254181 LUC7L3O95232 432 aaKnown RBP8.59□□□□□ -1.03
USP29-201ENST00000254181 ATXN8OSP0DMR3 200 aa8.59□□□□□ -1.03
USP29-201ENST00000254181 LMOD1P29536 600 aaPredicted RBP8.59□□□□□ -1.03
USP29-201ENST00000254181 ADD2P35612 726 aa8.59□□□□□ -1.03
USP29-201ENST00000254181 TRPC1P48995 793 aa8.59□□□□□ -1.03
USP29-201ENST00000254181 RASA3Q14644 834 aa8.59□□□□□ -1.03
USP29-201ENST00000254181 SOGA3Q5TF21 947 aa8.59□□□□□ -1.03
USP29-201ENST00000254181 SNX32Q86XE0 403 aa8.59□□□□□ -1.03
USP29-201ENST00000254181 CCDC13Q8IYE1 715 aa8.59□□□□□ -1.03
USP29-201ENST00000254181 UBXN6Q9BZV1 441 aa8.59□□□□□ -1.03
USP29-201ENST00000254181 CLSTN2Q9H4D0 955 aa8.59□□□□□ -1.03
USP29-201ENST00000254181 OPA1O60313 960 aa8.59□□□□□ -1.03
USP29-201ENST00000254181 ZNF202O95125 648 aa8.59□□□□□ -1.03
USP29-201ENST00000254181 MYCLP1P12525 358 aaPredicted RBP8.59□□□□□ -1.03
USP29-201ENST00000254181 ZNF132P52740 706 aa8.59□□□□□ -1.03
USP29-201ENST00000254181 ROR2Q01974 943 aaKnown RBP8.59□□□□□ -1.03
USP29-201ENST00000254181 SFSWAPQ12872 951 aaKnown RBP8.59□□□□□ -1.03
USP29-201ENST00000254181 BEND6Q5SZJ8 279 aaPredicted RBP8.59□□□□□ -1.03
USP29-201ENST00000254181 CWF19L1Q69YN2 538 aaKnown RBP8.59□□□□□ -1.03
USP29-201ENST00000254181 ZBTB40Q9NUA8 1239 aa8.59□□□□□ -1.03
USP29-201ENST00000254181 INSRP06213 1382 aa8.59□□□□□ -1.03
USP29-201ENST00000254181 PRSS47A8MTI9 375 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms