RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 TRPC3Q13507 836 aa14.71□□□□□ -0.05
PCDHGA3-201ENST00000253812 C8orf58Q8NAV2 365 aa14.71□□□□□ -0.05
PCDHGA3-201ENST00000253812 TBX22Q9Y458 520 aa14.71□□□□□ -0.05
PCDHGA3-201ENST00000253812 MSH6P52701 1360 aa14.71□□□□□ -0.05
PCDHGA3-201ENST00000253812 TRIM75PA6NK02 468 aa14.71□□□□□ -0.05
PCDHGA3-201ENST00000253812 CCDC65Q8IXS2 484 aa14.71□□□□□ -0.05
PCDHGA3-201ENST00000253812 SAAL1Q96ER3 474 aa14.71□□□□□ -0.05
PCDHGA3-201ENST00000253812 PHACTR3Q96KR7 559 aa14.71□□□□□ -0.05
PCDHGA3-201ENST00000253812 TCEANC2Q96MN5 208 aa14.71□□□□□ -0.05
PCDHGA3-201ENST00000253812 MKNK2Q9HBH9 465 aa14.71□□□□□ -0.05
PCDHGA3-201ENST00000253812 ABCF2Q9UG63 623 aa14.71□□□□□ -0.05
PCDHGA3-201ENST00000253812 PPP1R9AQ9ULJ8 1098 aa14.71□□□□□ -0.05
PCDHGA3-201ENST00000253812 NPATQ14207 1427 aa14.71□□□□□ -0.05
PCDHGA3-201ENST00000253812 PRR16Q569H4 304 aa14.71□□□□□ -0.06
PCDHGA3-201ENST00000253812 LRRC59Q96AG4 307 aaKnown RBP14.71□□□□□ -0.06
PCDHGA3-201ENST00000253812 TMEM63CQ9P1W3 806 aa14.71□□□□□ -0.06
PCDHGA3-201ENST00000253812 ASIC1P78348 528 aa14.7□□□□□ -0.06
PCDHGA3-201ENST00000253812 METTL24Q5JXM2 366 aa14.7□□□□□ -0.06
PCDHGA3-201ENST00000253812 TSHZ3Q63HK5 1081 aa14.7□□□□□ -0.06
PCDHGA3-201ENST00000253812 SYCP3Q8IZU3 236 aa14.7□□□□□ -0.06
PCDHGA3-201ENST00000253812 SECISBP2LQ93073 1101 aaKnown RBP14.7□□□□□ -0.06
PCDHGA3-201ENST00000253812 TSKSQ9UJT2 592 aa14.7□□□□□ -0.06
PCDHGA3-201ENST00000253812 MAP3K2Q9Y2U5 619 aa14.7□□□□□ -0.06
PCDHGA3-201ENST00000253812 UHRF1BP1Q6BDS2 1440 aa14.7□□□□□ -0.06
PCDHGA3-201ENST00000253812 NDC80O14777 642 aa14.7□□□□□ -0.06
PCDHGA3-201ENST00000253812 E2F5Q15329 346 aa14.7□□□□□ -0.06
PCDHGA3-201ENST00000253812 RABGGTAQ92696 567 aa14.7□□□□□ -0.06
PCDHGA3-201ENST00000253812 HOMER3Q9NSC5 361 aa14.7□□□□□ -0.06
PCDHGA3-201ENST00000253812 ZBTB43O43298 467 aa14.7□□□□□ -0.06
PCDHGA3-201ENST00000253812 TERF2Q15554 542 aa14.7□□□□□ -0.06
PCDHGA3-201ENST00000253812 ATP5J2-PTCD1G3V325 749 aa14.7□□□□□ -0.06
PCDHGA3-201ENST00000253812 APBA1Q02410 837 aa14.7□□□□□ -0.06
PCDHGA3-201ENST00000253812 INF2Q27J81 1249 aa14.7□□□□□ -0.06
PCDHGA3-201ENST00000253812 CFAP221Q4G0U5 840 aa14.7□□□□□ -0.06
PCDHGA3-201ENST00000253812 SEL1L2Q5TEA6 688 aa14.7□□□□□ -0.06
PCDHGA3-201ENST00000253812 HHATQ5VTY9 493 aa14.7□□□□□ -0.06
PCDHGA3-201ENST00000253812 ATP10AO60312 1499 aa14.7□□□□□ -0.06
PCDHGA3-201ENST00000253812 USP37Q86T82 979 aa14.69□□□□□ -0.06
PCDHGA3-201ENST00000253812 USP26Q9BXU7 913 aa14.69□□□□□ -0.06
PCDHGA3-201ENST00000253812 PDE11AQ9HCR9 933 aa14.69□□□□□ -0.06
PCDHGA3-201ENST00000253812 DDX41Q9UJV9 622 aaKnown RBP14.69□□□□□ -0.06
PCDHGA3-201ENST00000253812 PSMD6Q15008 389 aa14.69□□□□□ -0.06
PCDHGA3-201ENST00000253812 MTHFSDQ2M296 383 aaKnown RBP14.69□□□□□ -0.06
PCDHGA3-201ENST00000253812 NOX5Q96PH1 765 aa14.69□□□□□ -0.06
PCDHGA3-201ENST00000253812 C19orf44Q9H6X5 657 aa14.69□□□□□ -0.06
PCDHGA3-201ENST00000253812 TBCAO75347 108 aaKnown RBP14.69□□□□□ -0.06
PCDHGA3-201ENST00000253812 IGHMBP2P38935 993 aaKnown RBP14.69□□□□□ -0.06
PCDHGA3-201ENST00000253812 SLMAPQ14BN4 828 aa14.69□□□□□ -0.06
PCDHGA3-201ENST00000253812 ANKRD44Q8N8A2 993 aa14.69□□□□□ -0.06
PCDHGA3-201ENST00000253812 TTC36A6NLP5 189 aa14.69□□□□□ -0.06
PCDHGA3-201ENST00000253812 GPTP24298 496 aa14.69□□□□□ -0.06
PCDHGA3-201ENST00000253812 PPP4R3AQ6IN85 833 aa14.69□□□□□ -0.06
PCDHGA3-201ENST00000253812 CSRNP2Q9H175 543 aa14.69□□□□□ -0.06
PCDHGA3-201ENST00000253812 ABCC1P33527 1531 aa14.68□□□□□ -0.06
PCDHGA3-201ENST00000253812 MAST1Q9Y2H9 1570 aa14.68□□□□□ -0.06
PCDHGA3-201ENST00000253812 SLC39A6Q13433 755 aa14.68□□□□□ -0.06
PCDHGA3-201ENST00000253812 Q6ZUG5 572 aa14.68□□□□□ -0.06
PCDHGA3-201ENST00000253812 FAM204AQ9H8W3 233 aa14.68□□□□□ -0.06
PCDHGA3-201ENST00000253812 BIRC2Q13490 618 aa14.68□□□□□ -0.06
PCDHGA3-201ENST00000253812 RHPN1Q8TCX5 695 aa14.68□□□□□ -0.06
PCDHGA3-201ENST00000253812 SAR1BQ9Y6B6 198 aa14.68□□□□□ -0.06
PCDHGA3-201ENST00000253812 COL17A1Q9UMD9 1497 aaPredicted RBP14.68□□□□□ -0.06
PCDHGA3-201ENST00000253812 HMGB2P26583 209 aaKnown RBP14.68□□□□□ -0.06
PCDHGA3-201ENST00000253812 TMTC2Q8N394 836 aa14.68□□□□□ -0.06
PCDHGA3-201ENST00000253812 IQUBQ8NA54 791 aa14.68□□□□□ -0.06
PCDHGA3-201ENST00000253812 CHUKO15111 745 aa14.68□□□□□ -0.06
PCDHGA3-201ENST00000253812 TBC1D8BQ0IIM8 1120 aa14.68□□□□□ -0.06
PCDHGA3-201ENST00000253812 KLHDC4Q8TBB5 520 aa14.68□□□□□ -0.06
PCDHGA3-201ENST00000253812 SCOCQ9UIL1 159 aa14.68□□□□□ -0.06
PCDHGA3-201ENST00000253812 A0A1B0GVL5 298 aa14.67□□□□□ -0.06
PCDHGA3-201ENST00000253812 PPP1R2P41236 205 aa14.67□□□□□ -0.06
PCDHGA3-201ENST00000253812 POLE2P56282 527 aa14.67□□□□□ -0.06
PCDHGA3-201ENST00000253812 JARID2Q92833 1246 aaPredicted RBP14.67□□□□□ -0.06
PCDHGA3-201ENST00000253812 EPSTI1Q96J88 318 aa14.67□□□□□ -0.06
PCDHGA3-201ENST00000253812 GDAP1L1Q96MZ0 367 aa14.67□□□□□ -0.06
PCDHGA3-201ENST00000253812 TSC22D3Q99576 134 aa14.67□□□□□ -0.06
PCDHGA3-201ENST00000253812 MEIS3Q99687 375 aa14.67□□□□□ -0.06
PCDHGA3-201ENST00000253812 XAB2Q9HCS7 855 aaKnown RBP14.67□□□□□ -0.06
PCDHGA3-201ENST00000253812 TRMT112Q9UI30 125 aaKnown RBP14.67□□□□□ -0.06
PCDHGA3-201ENST00000253812 TNNQ9UQP3 1299 aa14.67□□□□□ -0.06
PCDHGA3-201ENST00000253812 CEP104O60308 925 aa14.67□□□□□ -0.06
PCDHGA3-201ENST00000253812 ATP1A2P50993 1020 aa14.67□□□□□ -0.06
PCDHGA3-201ENST00000253812 HAND2P61296 217 aa14.67□□□□□ -0.06
PCDHGA3-201ENST00000253812 VWA3BQ502W6 1294 aa14.67□□□□□ -0.06
PCDHGA3-201ENST00000253812 ABTB1Q969K4 478 aaPredicted RBP14.67□□□□□ -0.06
PCDHGA3-201ENST00000253812 EYA1Q99502 592 aa14.67□□□□□ -0.06
PCDHGA3-201ENST00000253812 MRFAP1Q9Y605 127 aa14.67□□□□□ -0.06
PCDHGA3-201ENST00000253812 MAP3K19Q56UN5 1328 aa14.67□□□□□ -0.06
PCDHGA3-201ENST00000253812 FLT4P35916 1363 aa14.67□□□□□ -0.06
PCDHGA3-201ENST00000253812 TROVE2P10155 538 aaKnown RBP eCLIP14.67□□□□□ -0.06
PCDHGA3-201ENST00000253812 KRT24Q2M2I5 525 aa14.67□□□□□ -0.06
PCDHGA3-201ENST00000253812 UBE3BQ7Z3V4 1068 aa14.67□□□□□ -0.06
PCDHGA3-201ENST00000253812 TSPYL6Q8N831 410 aa14.67□□□□□ -0.06
PCDHGA3-201ENST00000253812 TACC3Q9Y6A5 838 aa14.67□□□□□ -0.06
PCDHGA3-201ENST00000253812 RGS16O15492 202 aaPredicted RBP14.66□□□□□ -0.06
PCDHGA3-201ENST00000253812 GCP02774 474 aa14.66□□□□□ -0.06
PCDHGA3-201ENST00000253812 KRT9P35527 623 aa14.66□□□□□ -0.06
PCDHGA3-201ENST00000253812 PPP1R42Q7Z4L9 355 aa14.66□□□□□ -0.06
PCDHGA3-201ENST00000253812 MLKLQ8NB16 471 aa14.66□□□□□ -0.06
PCDHGA3-201ENST00000253812 RGS22Q8NE09 1264 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms