RNA–Protein interactions for RNA: ENST00000251654.8

PCCB-201, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCCB, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-201ENST00000251654 PTPDC1A2A3K4 754 aa20.3■□□□□ 0.84
PCCB-201ENST00000251654 VPS37CA5D8V6 355 aaPredicted RBP20.3■□□□□ 0.84
PCCB-201ENST00000251654 LDHCP07864 332 aa20.3■□□□□ 0.84
PCCB-201ENST00000251654 CDC37L1Q7L3B6 337 aa20.3■□□□□ 0.84
PCCB-201ENST00000251654 SH3RF3Q8TEJ3 882 aaPredicted RBP20.3■□□□□ 0.84
PCCB-201ENST00000251654 GAKO14976 1311 aa20.29■□□□□ 0.84
PCCB-201ENST00000251654 LIFRP42702 1097 aa20.29■□□□□ 0.84
PCCB-201ENST00000251654 EVX2Q03828 476 aa20.29■□□□□ 0.84
PCCB-201ENST00000251654 SBK1Q52WX2 424 aa20.29■□□□□ 0.84
PCCB-201ENST00000251654 RRP12Q5JTH9 1297 aaKnown RBP20.29■□□□□ 0.84
PCCB-201ENST00000251654 APOA5Q6Q788 366 aa20.29■□□□□ 0.84
PCCB-201ENST00000251654 CCDC125Q86Z20 511 aa20.29■□□□□ 0.84
PCCB-201ENST00000251654 STK11IPQ8N1F8 1099 aa20.29■□□□□ 0.84
PCCB-201ENST00000251654 DDX11Q96FC9 970 aa20.29■□□□□ 0.84
PCCB-201ENST00000251654 FAM163AQ96GL9 167 aaPredicted RBP20.29■□□□□ 0.84
PCCB-201ENST00000251654 MTA3Q9BTC8 594 aa20.29■□□□□ 0.84
PCCB-201ENST00000251654 ARPP21Q9UBL0 812 aaPredicted RBP20.29■□□□□ 0.84
PCCB-201ENST00000251654 SCN9AQ15858 1988 aa20.28■□□□□ 0.84
PCCB-201ENST00000251654 BAG3O95817 575 aa20.28■□□□□ 0.84
PCCB-201ENST00000251654 PCP11498 1178 aaKnown RBP20.28■□□□□ 0.84
PCCB-201ENST00000251654 HMGN5P82970 282 aaKnown RBP20.28■□□□□ 0.84
PCCB-201ENST00000251654 DOK7Q18PE1 504 aa20.28■□□□□ 0.84
PCCB-201ENST00000251654 TMEM67Q5HYA8 995 aa20.28■□□□□ 0.84
PCCB-201ENST00000251654 CHMP4CQ96CF2 233 aa20.28■□□□□ 0.84
PCCB-201ENST00000251654 EYA3Q99504 573 aa20.28■□□□□ 0.84
PCCB-201ENST00000251654 TOMM22Q9NS69 142 aa20.28■□□□□ 0.84
PCCB-201ENST00000251654 FOCADQ5VW36 1801 aa20.28■□□□□ 0.84
PCCB-201ENST00000251654 GPR75-ASB3A0A0A6YYF3 556 aa20.27■□□□□ 0.84
PCCB-201ENST00000251654 GSE1Q14687 1217 aa20.27■□□□□ 0.84
PCCB-201ENST00000251654 SKOR2Q2VWA4 1001 aaPredicted RBP20.27■□□□□ 0.84
PCCB-201ENST00000251654 CERS5Q8N5B7 392 aa20.27■□□□□ 0.84
PCCB-201ENST00000251654 SUGT1Q9Y2Z0 365 aa20.27■□□□□ 0.84
PCCB-201ENST00000251654 IFIT3O14879 490 aaKnown RBP20.27■□□□□ 0.84
PCCB-201ENST00000251654 FOXD4L6Q3SYB3 417 aaPredicted RBP20.27■□□□□ 0.84
PCCB-201ENST00000251654 FOXD4L3Q6VB84 417 aaPredicted RBP20.27■□□□□ 0.84
PCCB-201ENST00000251654 CERS3Q8IU89 383 aa20.27■□□□□ 0.84
PCCB-201ENST00000251654 ESR2Q92731 530 aa20.27■□□□□ 0.84
PCCB-201ENST00000251654 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.27■□□□□ 0.84
PCCB-201ENST00000251654 DHX16O60231 1041 aaKnown RBP20.26■□□□□ 0.83
PCCB-201ENST00000251654 BTDP43251 543 aa20.26■□□□□ 0.83
PCCB-201ENST00000251654 RAB11FIP4Q86YS3 637 aa20.26■□□□□ 0.83
PCCB-201ENST00000251654 NOL10Q9BSC4 688 aaKnown RBP20.26■□□□□ 0.83
PCCB-201ENST00000251654 ATP6V1DQ9Y5K8 247 aa20.26■□□□□ 0.83
PCCB-201ENST00000251654 PRPF40AO75400 957 aaKnown RBP20.25■□□□□ 0.83
PCCB-201ENST00000251654 CYP2D6P10635 497 aa20.25■□□□□ 0.83
PCCB-201ENST00000251654 FDPSP14324 419 aaKnown RBP20.25■□□□□ 0.83
PCCB-201ENST00000251654 ZKSCAN3Q9BRR0 538 aa20.25■□□□□ 0.83
PCCB-201ENST00000251654 MCM9Q9NXL9 1143 aa20.25■□□□□ 0.83
PCCB-201ENST00000251654 NID2Q14112 1375 aa20.25■□□□□ 0.83
PCCB-201ENST00000251654 ADAMTSL1Q8N6G6 1762 aa20.25■□□□□ 0.83
PCCB-201ENST00000251654 ORC4O43929 436 aa20.25■□□□□ 0.83
PCCB-201ENST00000251654 SART3Q15020 963 aaKnown RBP20.25■□□□□ 0.83
PCCB-201ENST00000251654 KLHL40Q2TBA0 621 aa20.25■□□□□ 0.83
PCCB-201ENST00000251654 PODNQ7Z5L7 613 aa20.25■□□□□ 0.83
PCCB-201ENST00000251654 SLF2Q8IX21 1173 aa20.25■□□□□ 0.83
PCCB-201ENST00000251654 FAM184AQ8NB25 1140 aa20.25■□□□□ 0.83
PCCB-201ENST00000251654 ZNF219Q9P2Y4 722 aaPredicted RBP20.25■□□□□ 0.83
PCCB-201ENST00000251654 ROBO3Q96MS0 1386 aa20.24■□□□□ 0.83
PCCB-201ENST00000251654 PRDM1O75626 825 aa20.24■□□□□ 0.83
PCCB-201ENST00000251654 USP17L8P0C7I0 530 aa20.24■□□□□ 0.83
PCCB-201ENST00000251654 USP5P45974 858 aa20.24■□□□□ 0.83
PCCB-201ENST00000251654 RHBDL3P58872 404 aa20.24■□□□□ 0.83
PCCB-201ENST00000251654 C12orf60Q5U649 245 aa20.24■□□□□ 0.83
PCCB-201ENST00000251654 DBNDD1Q9H9R9 158 aa20.24■□□□□ 0.83
PCCB-201ENST00000251654 ZBTB43O43298 467 aa20.23■□□□□ 0.83
PCCB-201ENST00000251654 PPFIA3O75145 1194 aa20.23■□□□□ 0.83
PCCB-201ENST00000251654 METAP2P50579 478 aaKnown RBP eCLIP20.23■□□□□ 0.83
PCCB-201ENST00000251654 SEC23AQ15436 765 aa20.23■□□□□ 0.83
PCCB-201ENST00000251654 CC2D2BQ6DHV5 1058 aa20.23■□□□□ 0.83
PCCB-201ENST00000251654 NFXL1Q6ZNB6 911 aa20.23■□□□□ 0.83
PCCB-201ENST00000251654 FERMT3Q86UX7 667 aa20.23■□□□□ 0.83
PCCB-201ENST00000251654 MICU3Q86XE3 530 aa20.23■□□□□ 0.83
PCCB-201ENST00000251654 KIF3AQ9Y496 699 aa20.23■□□□□ 0.83
PCCB-201ENST00000251654 DAGLAQ9Y4D2 1042 aa20.23■□□□□ 0.83
PCCB-201ENST00000251654 ECM29Q5VYK3 1845 aa20.23■□□□□ 0.83
PCCB-201ENST00000251654 PLCG2P16885 1265 aa20.23■□□□□ 0.83
PCCB-201ENST00000251654 RXRAP19793 462 aa20.23■□□□□ 0.83
PCCB-201ENST00000251654 KCNA3P22001 575 aa20.23■□□□□ 0.83
PCCB-201ENST00000251654 WTAPQ15007 396 aa20.23■□□□□ 0.83
PCCB-201ENST00000251654 TMEM87AQ8NBN3 555 aa20.23■□□□□ 0.83
PCCB-201ENST00000251654 TGFBRAP1Q8WUH2 860 aa20.23■□□□□ 0.83
PCCB-201ENST00000251654 FBXW7Q969H0 707 aa20.23■□□□□ 0.83
PCCB-201ENST00000251654 UBAC1Q9BSL1 405 aa20.23■□□□□ 0.83
PCCB-201ENST00000251654 MXD3Q9BW11 206 aa20.23■□□□□ 0.83
PCCB-201ENST00000251654 SLC12A7Q9Y666 1083 aa20.23■□□□□ 0.83
PCCB-201ENST00000251654 DDX49Q9Y6V7 483 aaKnown RBP20.23■□□□□ 0.83
PCCB-201ENST00000251654 TNKSO95271 1327 aa20.22■□□□□ 0.83
PCCB-201ENST00000251654 CDC27P30260 824 aa20.22■□□□□ 0.83
PCCB-201ENST00000251654 MYL10Q9BUA6 226 aa20.22■□□□□ 0.83
PCCB-201ENST00000251654 GZF1Q9H116 711 aaPredicted RBP20.22■□□□□ 0.83
PCCB-201ENST00000251654 GDPD2Q9HCC8 539 aa20.22■□□□□ 0.83
PCCB-201ENST00000251654 KCNQ5Q9NR82 932 aa20.22■□□□□ 0.83
PCCB-201ENST00000251654 FAM217BQ9NTX9 383 aaPredicted RBP20.22■□□□□ 0.83
PCCB-201ENST00000251654 CNPY2Q9Y2B0 182 aa20.22■□□□□ 0.83
PCCB-201ENST00000251654 MYH1P12882 1939 aa20.22■□□□□ 0.83
PCCB-201ENST00000251654 MYH15Q9Y2K3 1946 aa20.21■□□□□ 0.83
PCCB-201ENST00000251654 ERICH2A1L162 156 aa20.21■□□□□ 0.83
PCCB-201ENST00000251654 CCDC69A6NI79 296 aa20.21■□□□□ 0.83
PCCB-201ENST00000251654 G3V3G9 751 aa20.21■□□□□ 0.83
PCCB-201ENST00000251654 CPLX1O14810 134 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms