RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 CLIC4Q9Y696 253 aa17.18■□□□□ 0.34
MBD4-201ENST00000249910 SCN7AQ01118 1682 aa17.17■□□□□ 0.34
MBD4-201ENST00000249910 MAP3K11Q16584 847 aa17.17■□□□□ 0.34
MBD4-201ENST00000249910 CHMP4CQ96CF2 233 aa17.17■□□□□ 0.34
MBD4-201ENST00000249910 NHSQ6T4R5 1651 aa17.17■□□□□ 0.34
MBD4-201ENST00000249910 USP17L12C9JPN9 530 aa17.16■□□□□ 0.34
MBD4-201ENST00000249910 USP17L21D6R901 530 aa17.16■□□□□ 0.34
MBD4-201ENST00000249910 LIFRP42702 1097 aa17.16■□□□□ 0.34
MBD4-201ENST00000249910 NUP133Q8WUM0 1156 aa17.16■□□□□ 0.34
MBD4-201ENST00000249910 GOLPH3LQ9H4A5 285 aa17.16■□□□□ 0.34
MBD4-201ENST00000249910 GUCY1A2P33402 732 aa17.16■□□□□ 0.34
MBD4-201ENST00000249910 GRAPQ13588 217 aa17.16■□□□□ 0.34
MBD4-201ENST00000249910 PROM2Q8N271 834 aa17.16■□□□□ 0.34
MBD4-201ENST00000249910 GRAPLQ8TC17 118 aaPredicted RBP17.16■□□□□ 0.34
MBD4-201ENST00000249910 SLC26A6Q9BXS9 759 aa17.16■□□□□ 0.34
MBD4-201ENST00000249910 DOCK2Q92608 1830 aa17.16■□□□□ 0.34
MBD4-201ENST00000249910 IARSP41252 1262 aaKnown RBP17.15■□□□□ 0.34
MBD4-201ENST00000249910 WTAPQ15007 396 aa17.15■□□□□ 0.34
MBD4-201ENST00000249910 KRT27Q7Z3Y8 459 aa17.15■□□□□ 0.34
MBD4-201ENST00000249910 CCAR1Q8IX12 1150 aaKnown RBP17.15■□□□□ 0.34
MBD4-201ENST00000249910 ERCC4Q92889 916 aaPredicted RBP17.15■□□□□ 0.34
MBD4-201ENST00000249910 SERPINB2P05120 415 aa17.15■□□□□ 0.34
MBD4-201ENST00000249910 CCDC192P0DO97 292 aa17.15■□□□□ 0.34
MBD4-201ENST00000249910 GRIK5Q16478 980 aa17.15■□□□□ 0.34
MBD4-201ENST00000249910 ZNF396Q96N95 335 aaPredicted RBP17.15■□□□□ 0.34
MBD4-201ENST00000249910 A0A087WWV3 80 aa17.14■□□□□ 0.34
MBD4-201ENST00000249910 KIF23Q02241 960 aaPredicted RBP17.14■□□□□ 0.34
MBD4-201ENST00000249910 KRT40Q6A162 431 aa17.14■□□□□ 0.34
MBD4-201ENST00000249910 CTR9Q6PD62 1173 aa17.14■□□□□ 0.34
MBD4-201ENST00000249910 UBAC1Q9BSL1 405 aa17.14■□□□□ 0.34
MBD4-201ENST00000249910 PCDHA7Q9UN72 937 aa17.14■□□□□ 0.34
MBD4-201ENST00000249910 C4BP0C0L5 1744 aa17.14■□□□□ 0.33
MBD4-201ENST00000249910 ERICH2A1L162 156 aa17.14■□□□□ 0.33
MBD4-201ENST00000249910 SART3Q15020 963 aaKnown RBP17.14■□□□□ 0.33
MBD4-201ENST00000249910 MYSM1Q5VVJ2 828 aa17.14■□□□□ 0.33
MBD4-201ENST00000249910 TYRO3Q06418 890 aa17.13■□□□□ 0.33
MBD4-201ENST00000249910 DIXDC1Q155Q3 683 aa17.13■□□□□ 0.33
MBD4-201ENST00000249910 CPLX2Q6PUV4 134 aaKnown RBP17.13■□□□□ 0.33
MBD4-201ENST00000249910 SYNE3Q6ZMZ3 975 aa17.13■□□□□ 0.33
MBD4-201ENST00000249910 RPGRQ92834 1020 aaKnown RBP17.13■□□□□ 0.33
MBD4-201ENST00000249910 CLSTN2Q9H4D0 955 aa17.13■□□□□ 0.33
MBD4-201ENST00000249910 RNF41Q9H4P4 317 aaPredicted RBP17.13■□□□□ 0.33
MBD4-201ENST00000249910 DDX19AQ9NUU7 478 aaKnown RBP17.13■□□□□ 0.33
MBD4-201ENST00000249910 TNKSO95271 1327 aa17.13■□□□□ 0.33
MBD4-201ENST00000249910 SEMA3EO15041 775 aa17.13■□□□□ 0.33
MBD4-201ENST00000249910 CYP2D6P10635 497 aa17.13■□□□□ 0.33
MBD4-201ENST00000249910 SNW1Q13573 536 aaKnown RBP17.13■□□□□ 0.33
MBD4-201ENST00000249910 LINC00301Q8NCQ3 95 aa17.13■□□□□ 0.33
MBD4-201ENST00000249910 DCP1AQ9NPI6 582 aaPredicted RBP17.13■□□□□ 0.33
MBD4-201ENST00000249910 MRVI1Q9Y6F6 885 aa17.13■□□□□ 0.33
MBD4-201ENST00000249910 IRS2Q9Y4H2 1338 aa17.13■□□□□ 0.33
MBD4-201ENST00000249910 CACNA1SQ13698 1873 aa17.13■□□□□ 0.33
MBD4-201ENST00000249910 A0A1B0GVL5 298 aa17.12■□□□□ 0.33
MBD4-201ENST00000249910 AP5Z1O43299 807 aa17.12■□□□□ 0.33
MBD4-201ENST00000249910 NMT2O60551 498 aa17.12■□□□□ 0.33
MBD4-201ENST00000249910 CDKL5O76039 1030 aa17.12■□□□□ 0.33
MBD4-201ENST00000249910 ESR2Q92731 530 aa17.12■□□□□ 0.33
MBD4-201ENST00000249910 MARCKSP29966 332 aaPredicted RBP17.12■□□□□ 0.33
MBD4-201ENST00000249910 GPSM2P81274 684 aa17.12■□□□□ 0.33
MBD4-201ENST00000249910 DDR1Q08345 913 aa17.12■□□□□ 0.33
MBD4-201ENST00000249910 STK38Q15208 465 aa17.12■□□□□ 0.33
MBD4-201ENST00000249910 SF3A1Q15459 793 aaKnown RBP17.12■□□□□ 0.33
MBD4-201ENST00000249910 LUZP1Q86V48 1076 aa17.12■□□□□ 0.33
MBD4-201ENST00000249910 DZIP1Q86YF9 867 aaKnown RBP17.12■□□□□ 0.33
MBD4-201ENST00000249910 RTEL1Q9NZ71 1219 aa17.12■□□□□ 0.33
MBD4-201ENST00000249910 TAF1LQ8IZX4 1826 aa17.12■□□□□ 0.33
MBD4-201ENST00000249910 TNRC6CQ9HCJ0 1690 aaKnown RBP17.12■□□□□ 0.33
MBD4-201ENST00000249910 CASZ1Q86V15 1759 aa17.11■□□□□ 0.33
MBD4-201ENST00000249910 hCG_1642624A0A1W2PR95 340 aa17.11■□□□□ 0.33
MBD4-201ENST00000249910 ADRA2BP18089 450 aa17.11■□□□□ 0.33
MBD4-201ENST00000249910 RTN1Q16799 776 aa17.11■□□□□ 0.33
MBD4-201ENST00000249910 ANO6Q4KMQ2 910 aa17.11■□□□□ 0.33
MBD4-201ENST00000249910 ENAHQ8N8S7 591 aaPredicted RBP17.11■□□□□ 0.33
MBD4-201ENST00000249910 FSIP1Q8NA03 581 aa17.11■□□□□ 0.33
MBD4-201ENST00000249910 KCNJ14Q9UNX9 436 aa17.11■□□□□ 0.33
MBD4-201ENST00000249910 SBF2Q86WG5 1849 aa17.11■□□□□ 0.33
MBD4-201ENST00000249910 ADCY5O95622 1261 aa17.11■□□□□ 0.33
MBD4-201ENST00000249910 SSRP1Q08945 709 aaKnown RBP17.11■□□□□ 0.33
MBD4-201ENST00000249910 GNL2Q13823 731 aaKnown RBP17.11■□□□□ 0.33
MBD4-201ENST00000249910 TXNRD1Q16881 649 aa17.11■□□□□ 0.33
MBD4-201ENST00000249910 FAM47AQ5JRC9 791 aa17.11■□□□□ 0.33
MBD4-201ENST00000249910 ZNF654Q8IZM8 581 aa17.11■□□□□ 0.33
MBD4-201ENST00000249910 FANCBQ8NB91 859 aa17.11■□□□□ 0.33
MBD4-201ENST00000249910 BRIP1Q9BX63 1249 aa17.11■□□□□ 0.33
MBD4-201ENST00000249910 ANAPC4Q9UJX5 808 aa17.11■□□□□ 0.33
MBD4-201ENST00000249910 PRDM4Q9UKN5 801 aa17.11■□□□□ 0.33
MBD4-201ENST00000249910 CLCN1P35523 988 aa17.1■□□□□ 0.33
MBD4-201ENST00000249910 BAZ2AQ9UIF9 1905 aaKnown RBP17.1■□□□□ 0.33
MBD4-201ENST00000249910 LY75O60449 1722 aa17.1■□□□□ 0.33
MBD4-201ENST00000249910 UFL1O94874 794 aa17.1■□□□□ 0.33
MBD4-201ENST00000249910 SEC23AQ15436 765 aa17.1■□□□□ 0.33
MBD4-201ENST00000249910 ATL3Q6DD88 541 aa17.1■□□□□ 0.33
MBD4-201ENST00000249910 ZSCAN30Q86W11 494 aa17.1■□□□□ 0.33
MBD4-201ENST00000249910 XDHP47989 1333 aa17.1■□□□□ 0.33
MBD4-201ENST00000249910 SPTLC2O15270 562 aa17.09■□□□□ 0.33
MBD4-201ENST00000249910 USP17L8P0C7I0 530 aa17.09■□□□□ 0.33
MBD4-201ENST00000249910 IFNAR1P17181 557 aa17.09■□□□□ 0.33
MBD4-201ENST00000249910 ST5P78524 1137 aa17.09■□□□□ 0.33
MBD4-201ENST00000249910 CCDC73Q6ZRK6 1079 aa17.09■□□□□ 0.33
MBD4-201ENST00000249910 BRAPQ7Z569 592 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms