RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 CSADQ9Y600 493 aa15.55■□□□□ 0.08
VPREB3-201ENST00000248948 PPP4CP60510 307 aa15.54■□□□□ 0.08
VPREB3-201ENST00000248948 HDAC1Q13547 482 aaPredicted RBP15.54■□□□□ 0.08
VPREB3-201ENST00000248948 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.54■□□□□ 0.08
VPREB3-201ENST00000248948 SLC10A4Q96EP9 437 aa15.54■□□□□ 0.08
VPREB3-201ENST00000248948 GPATCH3Q96I76 525 aa15.54■□□□□ 0.08
VPREB3-201ENST00000248948 WRNIP1Q96S55 665 aa15.54■□□□□ 0.08
VPREB3-201ENST00000248948 CSRNP1Q96S65 589 aa15.54■□□□□ 0.08
VPREB3-201ENST00000248948 DDX4Q9NQI0 724 aaKnown RBP15.54■□□□□ 0.08
VPREB3-201ENST00000248948 MYH8P13535 1937 aa15.54■□□□□ 0.08
VPREB3-201ENST00000248948 MANSC4A6NHS7 340 aaPredicted RBP15.53■□□□□ 0.08
VPREB3-201ENST00000248948 MAP3K9P80192 1104 aa15.53■□□□□ 0.08
VPREB3-201ENST00000248948 PICALMQ13492 652 aa15.53■□□□□ 0.08
VPREB3-201ENST00000248948 ADGRA1Q86SQ6 560 aa15.53■□□□□ 0.08
VPREB3-201ENST00000248948 TEX11Q8IYF3 940 aa15.53■□□□□ 0.08
VPREB3-201ENST00000248948 OSBPL5Q9H0X9 879 aaPredicted RBP15.53■□□□□ 0.08
VPREB3-201ENST00000248948 ANTXR1Q9H6X2 564 aa15.53■□□□□ 0.08
VPREB3-201ENST00000248948 AATFQ9NY61 560 aaKnown RBP eCLIP15.53■□□□□ 0.08
VPREB3-201ENST00000248948 NDUFB9Q9Y6M9 179 aa15.53■□□□□ 0.08
VPREB3-201ENST00000248948 SPDYE5A6NIY4 337 aa15.52■□□□□ 0.08
VPREB3-201ENST00000248948 TM4SF4P48230 202 aa15.52■□□□□ 0.08
VPREB3-201ENST00000248948 LBX1P52954 281 aa15.52■□□□□ 0.08
VPREB3-201ENST00000248948 NOL9Q5SY16 702 aaKnown RBP15.52■□□□□ 0.08
VPREB3-201ENST00000248948 MAGEB6Q8N7X4 407 aa15.52■□□□□ 0.08
VPREB3-201ENST00000248948 SH3RF3Q8TEJ3 882 aaPredicted RBP15.52■□□□□ 0.08
VPREB3-201ENST00000248948 OPTNQ96CV9 577 aa15.52■□□□□ 0.08
VPREB3-201ENST00000248948 DNAJC2Q99543 621 aaKnown RBP15.52■□□□□ 0.08
VPREB3-201ENST00000248948 HAUS7Q99871 368 aa15.52■□□□□ 0.08
VPREB3-201ENST00000248948 ELP3Q9H9T3 547 aa15.52■□□□□ 0.08
VPREB3-201ENST00000248948 ECHDC1Q9NTX5 307 aa15.52■□□□□ 0.08
VPREB3-201ENST00000248948 ZNF112Q9UJU3 913 aa15.52■□□□□ 0.08
VPREB3-201ENST00000248948 SNCAIPQ9Y6H5 919 aa15.52■□□□□ 0.08
VPREB3-201ENST00000248948 CASP8AP2Q9UKL3 1982 aa15.52■□□□□ 0.07
VPREB3-201ENST00000248948 LOC285556D6RIA3 1793 aa15.52■□□□□ 0.07
VPREB3-201ENST00000248948 FLT1P17948 1338 aa15.51■□□□□ 0.07
VPREB3-201ENST00000248948 GOLIM4O00461 696 aa15.51■□□□□ 0.07
VPREB3-201ENST00000248948 SMARCA5O60264 1052 aaPredicted RBP15.51■□□□□ 0.07
VPREB3-201ENST00000248948 CYP7A1P22680 504 aa15.51■□□□□ 0.07
VPREB3-201ENST00000248948 INHBEP58166 350 aa15.51■□□□□ 0.07
VPREB3-201ENST00000248948 SH3BP5LQ7L8J4 393 aa15.51■□□□□ 0.07
VPREB3-201ENST00000248948 ZSCAN29Q8IWY8 852 aaPredicted RBP15.51■□□□□ 0.07
VPREB3-201ENST00000248948 ZFPM1Q8IX07 1006 aa15.51■□□□□ 0.07
VPREB3-201ENST00000248948 GCC1Q96CN9 775 aa15.51■□□□□ 0.07
VPREB3-201ENST00000248948 PAG1Q9NWQ8 432 aa15.51■□□□□ 0.07
VPREB3-201ENST00000248948 TTC41PQ6P2S7 1318 aa15.5■□□□□ 0.07
VPREB3-201ENST00000248948 DDTLA6NHG4 134 aaPredicted RBP15.5■□□□□ 0.07
VPREB3-201ENST00000248948 MAP3K10Q02779 954 aa15.5■□□□□ 0.07
VPREB3-201ENST00000248948 MKRN3Q13064 507 aaKnown RBP15.5■□□□□ 0.07
VPREB3-201ENST00000248948 ERO1BQ86YB8 467 aa15.5■□□□□ 0.07
VPREB3-201ENST00000248948 CFHR5Q9BXR6 569 aa15.5■□□□□ 0.07
VPREB3-201ENST00000248948 DHX36Q9H2U1 1008 aaKnown RBP15.5■□□□□ 0.07
VPREB3-201ENST00000248948 RNF186Q9NXI6 227 aa15.5■□□□□ 0.07
VPREB3-201ENST00000248948 TBC1D12O60347 775 aa15.49■□□□□ 0.07
VPREB3-201ENST00000248948 ALDH1A1P00352 501 aa15.49■□□□□ 0.07
VPREB3-201ENST00000248948 PDE6AP16499 860 aa15.49■□□□□ 0.07
VPREB3-201ENST00000248948 GJA5P36382 358 aa15.49■□□□□ 0.07
VPREB3-201ENST00000248948 COL13A1Q5TAT6 717 aaPredicted RBP15.49■□□□□ 0.07
VPREB3-201ENST00000248948 MIGA2Q7L4E1 593 aa15.49■□□□□ 0.07
VPREB3-201ENST00000248948 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.49■□□□□ 0.07
VPREB3-201ENST00000248948 BOLA2Q9H3K6 86 aa15.49■□□□□ 0.07
VPREB3-201ENST00000248948 BAZ2AQ9UIF9 1905 aaKnown RBP15.49■□□□□ 0.07
VPREB3-201ENST00000248948 TESPA1A2RU30 521 aaPredicted RBP15.48■□□□□ 0.07
VPREB3-201ENST00000248948 INPP5BP32019 993 aa15.48■□□□□ 0.07
VPREB3-201ENST00000248948 PPIL2Q13356 520 aa15.48■□□□□ 0.07
VPREB3-201ENST00000248948 SLC9C2Q5TAH2 1124 aa15.48■□□□□ 0.07
VPREB3-201ENST00000248948 ZKSCAN4Q969J2 545 aaPredicted RBP15.48■□□□□ 0.07
VPREB3-201ENST00000248948 OTUD5Q96G74 571 aa15.48■□□□□ 0.07
VPREB3-201ENST00000248948 BCL11AQ9H165 835 aa15.48■□□□□ 0.07
VPREB3-201ENST00000248948 HERC5Q9UII4 1024 aaKnown RBP15.48■□□□□ 0.07
VPREB3-201ENST00000248948 SUPT16HQ9Y5B9 1047 aaKnown RBP15.48■□□□□ 0.07
VPREB3-201ENST00000248948 TCRBV5S4A2TA0A5A2 114 aa15.47■□□□□ 0.07
VPREB3-201ENST00000248948 PHF20L1A8MW92 1017 aa15.47■□□□□ 0.07
VPREB3-201ENST00000248948 TRPA1O75762 1119 aa15.47■□□□□ 0.07
VPREB3-201ENST00000248948 ADD2P35612 726 aa15.47■□□□□ 0.07
VPREB3-201ENST00000248948 GTF2A2P52657 109 aa15.47■□□□□ 0.07
VPREB3-201ENST00000248948 PPATQ06203 517 aa15.47■□□□□ 0.07
VPREB3-201ENST00000248948 NOM1Q5C9Z4 860 aaKnown RBP15.47■□□□□ 0.07
VPREB3-201ENST00000248948 IFNL1Q8IU54 200 aa15.47■□□□□ 0.07
VPREB3-201ENST00000248948 SCYL3Q8IZE3 742 aa15.47■□□□□ 0.07
VPREB3-201ENST00000248948 MIGA1Q8NAN2 632 aa15.47■□□□□ 0.07
VPREB3-201ENST00000248948 TGFBRAP1Q8WUH2 860 aa15.47■□□□□ 0.07
VPREB3-201ENST00000248948 EDC3Q96F86 508 aaKnown RBP15.47■□□□□ 0.07
VPREB3-201ENST00000248948 RIOK1Q9BRS2 568 aaKnown RBP15.47■□□□□ 0.07
VPREB3-201ENST00000248948 ZBTB47Q9UFB7 747 aaPredicted RBP15.47■□□□□ 0.07
VPREB3-201ENST00000248948 TSKSQ9UJT2 592 aa15.47■□□□□ 0.07
VPREB3-201ENST00000248948 SALL3Q9BXA9 1300 aa15.46■□□□□ 0.07
VPREB3-201ENST00000248948 ZNF532Q9HCE3 1301 aa15.46■□□□□ 0.07
VPREB3-201ENST00000248948 ERC2O15083 957 aa15.46■□□□□ 0.07
VPREB3-201ENST00000248948 DYNLL1P63167 89 aaKnown RBP15.46■□□□□ 0.07
VPREB3-201ENST00000248948 ZSCAN25Q6NSZ9 544 aa15.46■□□□□ 0.07
VPREB3-201ENST00000248948 MAPKAPK5Q8IW41 473 aa15.46■□□□□ 0.07
VPREB3-201ENST00000248948 CNKSR2Q8WXI2 1034 aa15.46■□□□□ 0.07
VPREB3-201ENST00000248948 ZCCHC17Q9NP64 241 aaKnown RBP15.46■□□□□ 0.07
VPREB3-201ENST00000248948 PI4KBQ9UBF8 816 aa15.46■□□□□ 0.07
VPREB3-201ENST00000248948 MAGEB6P1A0A0J9YX57 407 aa15.45■□□□□ 0.06
VPREB3-201ENST00000248948 IGF2BP3O00425 579 aaKnown RBP eCLIP15.45■□□□□ 0.06
VPREB3-201ENST00000248948 CTNND1O60716 968 aaKnown RBP15.45■□□□□ 0.06
VPREB3-201ENST00000248948 GLRX3O76003 335 aaKnown RBP15.45■□□□□ 0.06
VPREB3-201ENST00000248948 HLA-DOAP06340 250 aa15.45■□□□□ 0.06
VPREB3-201ENST00000248948 MX1P20591 662 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms