RNA–Protein interactions for RNA: ENST00000244709.8

TREM1-201, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TREM1, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-201ENST00000244709 SPDYE2Q495Y8 402 aa13.69□□□□□ -0.22
TREM1-201ENST00000244709 ZNF70Q9UC06 446 aaPredicted RBP13.69□□□□□ -0.22
TREM1-201ENST00000244709 CTNNA3Q9UI47 895 aa13.69□□□□□ -0.22
TREM1-201ENST00000244709 CYP21A2P08686 494 aa13.69□□□□□ -0.22
TREM1-201ENST00000244709 HAND2P61296 217 aa13.69□□□□□ -0.22
TREM1-201ENST00000244709 CTR9Q6PD62 1173 aa13.69□□□□□ -0.22
TREM1-201ENST00000244709 RASEFQ8IZ41 740 aa13.69□□□□□ -0.22
TREM1-201ENST00000244709 DDRGK1Q96HY6 314 aa13.69□□□□□ -0.22
TREM1-201ENST00000244709 IDI2Q9BXS1 227 aa13.69□□□□□ -0.22
TREM1-201ENST00000244709 MCM9Q9NXL9 1143 aa13.69□□□□□ -0.22
TREM1-201ENST00000244709 FAM198AQ9UFP1 575 aa13.69□□□□□ -0.22
TREM1-201ENST00000244709 TAF6LQ9Y6J9 622 aa13.69□□□□□ -0.22
TREM1-201ENST00000244709 ASTN2O75129 1339 aaPredicted RBP13.68□□□□□ -0.22
TREM1-201ENST00000244709 POLR2AP24928 1970 aaKnown RBP13.68□□□□□ -0.22
TREM1-201ENST00000244709 CYP2D7A0A087X1C5 515 aa13.68□□□□□ -0.22
TREM1-201ENST00000244709 MYO1BO43795 1136 aa13.68□□□□□ -0.22
TREM1-201ENST00000244709 CYP2D6P10635 497 aa13.68□□□□□ -0.22
TREM1-201ENST00000244709 IMMTQ16891 758 aaKnown RBP13.68□□□□□ -0.22
TREM1-201ENST00000244709 SLC4A8Q2Y0W8 1093 aa13.68□□□□□ -0.22
TREM1-201ENST00000244709 KCNB2Q92953 911 aa13.68□□□□□ -0.22
TREM1-201ENST00000244709 OSBPL5Q9H0X9 879 aaPredicted RBP13.68□□□□□ -0.22
TREM1-201ENST00000244709 VEZTQ9HBM0 779 aa13.68□□□□□ -0.22
TREM1-201ENST00000244709 TSHZ2Q9NRE2 1034 aa13.68□□□□□ -0.22
TREM1-201ENST00000244709 ADARB2Q9NS39 739 aaKnown RBP13.68□□□□□ -0.22
TREM1-201ENST00000244709 TMOD2Q9NZR1 351 aa13.68□□□□□ -0.22
TREM1-201ENST00000244709 SAP30BPQ9UHR5 308 aaKnown RBP13.68□□□□□ -0.22
TREM1-201ENST00000244709 SIPA1L1O43166 1804 aa13.68□□□□□ -0.22
TREM1-201ENST00000244709 MINDY4BA8MYZ0 360 aa13.67□□□□□ -0.22
TREM1-201ENST00000244709 TCP10L2B9ZVM9 353 aa13.67□□□□□ -0.22
TREM1-201ENST00000244709 USP17L12C9JPN9 530 aa13.67□□□□□ -0.22
TREM1-201ENST00000244709 USP17L21D6R901 530 aa13.67□□□□□ -0.22
TREM1-201ENST00000244709 SMIM22K7EJ46 135 aa13.67□□□□□ -0.22
TREM1-201ENST00000244709 HIRAP54198 1017 aaPredicted RBP13.67□□□□□ -0.22
TREM1-201ENST00000244709 EVX2Q03828 476 aa13.67□□□□□ -0.22
TREM1-201ENST00000244709 TCP10Q12799 353 aa13.67□□□□□ -0.22
TREM1-201ENST00000244709 RNF20Q5VTR2 975 aa13.67□□□□□ -0.22
TREM1-201ENST00000244709 ZFPM1Q8IX07 1006 aa13.67□□□□□ -0.22
TREM1-201ENST00000244709 NBPF3Q9H094 633 aa13.67□□□□□ -0.22
TREM1-201ENST00000244709 ARPP21Q9UBL0 812 aaPredicted RBP13.67□□□□□ -0.22
TREM1-201ENST00000244709 HACL1Q9UJ83 578 aa13.67□□□□□ -0.22
TREM1-201ENST00000244709 SNX14Q9Y5W7 946 aa13.67□□□□□ -0.22
TREM1-201ENST00000244709 ZNF213O14771 459 aa13.66□□□□□ -0.22
TREM1-201ENST00000244709 CTDSPL2Q05D32 466 aa13.66□□□□□ -0.22
TREM1-201ENST00000244709 PPARAQ07869 468 aa13.66□□□□□ -0.22
TREM1-201ENST00000244709 SBK1Q52WX2 424 aa13.66□□□□□ -0.22
TREM1-201ENST00000244709 MYH8P13535 1937 aa13.66□□□□□ -0.22
TREM1-201ENST00000244709 CNTNAP1P78357 1384 aa13.66□□□□□ -0.22
TREM1-201ENST00000244709 POTECB2RU33 542 aa13.66□□□□□ -0.22
TREM1-201ENST00000244709 NPM3O75607 178 aaKnown RBP13.66□□□□□ -0.22
TREM1-201ENST00000244709 POLR3DP05423 398 aaPredicted RBP13.66□□□□□ -0.22
TREM1-201ENST00000244709 ZKSCAN1P17029 563 aaPredicted RBP13.66□□□□□ -0.22
TREM1-201ENST00000244709 EPHX2P34913 555 aa13.66□□□□□ -0.22
TREM1-201ENST00000244709 ANAPC15P60006 121 aa13.66□□□□□ -0.22
TREM1-201ENST00000244709 STOX1Q6ZVD7 989 aa13.66□□□□□ -0.22
TREM1-201ENST00000244709 TBC1D10CQ8IV04 446 aa13.66□□□□□ -0.22
TREM1-201ENST00000244709 KIF2CQ99661 725 aa13.66□□□□□ -0.22
TREM1-201ENST00000244709 SCAF8Q9UPN6 1271 aaKnown RBP13.66□□□□□ -0.22
TREM1-201ENST00000244709 ENTPD3O75355 529 aa13.65□□□□□ -0.22
TREM1-201ENST00000244709 PLCD1P51178 756 aa13.65□□□□□ -0.22
TREM1-201ENST00000244709 ADCK5Q3MIX3 580 aa13.65□□□□□ -0.22
TREM1-201ENST00000244709 C12orf60Q5U649 245 aa13.65□□□□□ -0.22
TREM1-201ENST00000244709 ANGEL2Q5VTE6 544 aaKnown RBP13.65□□□□□ -0.22
TREM1-201ENST00000244709 FKBP1CQ5VVH2 108 aa13.65□□□□□ -0.22
TREM1-201ENST00000244709 AMOTL1Q8IY63 956 aa13.65□□□□□ -0.22
TREM1-201ENST00000244709 STK11IPQ8N1F8 1099 aa13.65□□□□□ -0.22
TREM1-201ENST00000244709 ANAPC4Q9UJX5 808 aa13.65□□□□□ -0.22
TREM1-201ENST00000244709 TACC3Q9Y6A5 838 aa13.65□□□□□ -0.22
TREM1-201ENST00000244709 COL2A1P02458 1487 aaPredicted RBP13.65□□□□□ -0.22
TREM1-201ENST00000244709 IQCA1LA6NCM1 817 aa13.64□□□□□ -0.23
TREM1-201ENST00000244709 E7EWF7 191 aa13.64□□□□□ -0.23
TREM1-201ENST00000244709 TSGA10IPQ3SY00 556 aa13.64□□□□□ -0.23
TREM1-201ENST00000244709 SH3BP5LQ7L8J4 393 aa13.64□□□□□ -0.23
TREM1-201ENST00000244709 IL17RAQ96F46 866 aa13.64□□□□□ -0.23
TREM1-201ENST00000244709 TAF1DQ9H5J8 278 aaPredicted RBP13.64□□□□□ -0.23
TREM1-201ENST00000244709 GGA3Q9NZ52 723 aa13.64□□□□□ -0.23
TREM1-201ENST00000244709 ROBO3Q96MS0 1386 aa13.64□□□□□ -0.23
TREM1-201ENST00000244709 DDTLA6NHG4 134 aaPredicted RBP13.63□□□□□ -0.23
TREM1-201ENST00000244709 USP50Q70EL3 339 aaPredicted RBP13.63□□□□□ -0.23
TREM1-201ENST00000244709 FAM83AQ86UY5 434 aa13.63□□□□□ -0.23
TREM1-201ENST00000244709 FAM151AQ8WW52 585 aa13.63□□□□□ -0.23
TREM1-201ENST00000244709 DYNLL2Q96FJ2 89 aa13.63□□□□□ -0.23
TREM1-201ENST00000244709 INCENPQ9NQS7 918 aa13.63□□□□□ -0.23
TREM1-201ENST00000244709 NEDD4P46934 1319 aa13.63□□□□□ -0.23
TREM1-201ENST00000244709 ATRNL1Q5VV63 1379 aa13.63□□□□□ -0.23
TREM1-201ENST00000244709 HLA-DOAP06340 250 aa13.63□□□□□ -0.23
TREM1-201ENST00000244709 TNNI2P48788 182 aa13.63□□□□□ -0.23
TREM1-201ENST00000244709 TNFAIP1Q13829 316 aa13.63□□□□□ -0.23
TREM1-201ENST00000244709 COL9A3Q14050 684 aaPredicted RBP13.63□□□□□ -0.23
TREM1-201ENST00000244709 KRT32Q14532 448 aa13.63□□□□□ -0.23
TREM1-201ENST00000244709 AKNAD1Q5T1N1 836 aa13.63□□□□□ -0.23
TREM1-201ENST00000244709 APOBEC3FQ8IUX4 373 aaKnown RBP13.63□□□□□ -0.23
TREM1-201ENST00000244709 ZSCAN29Q8IWY8 852 aaPredicted RBP13.63□□□□□ -0.23
TREM1-201ENST00000244709 STAG1Q8WVM7 1258 aa13.63□□□□□ -0.23
TREM1-201ENST00000244709 JAKMIP1Q96N16 626 aaKnown RBP13.63□□□□□ -0.23
TREM1-201ENST00000244709 TMEM39BQ9GZU3 492 aa13.63□□□□□ -0.23
TREM1-201ENST00000244709 RASA3Q14644 834 aa13.62□□□□□ -0.23
TREM1-201ENST00000244709 EAPPQ56P03 285 aaPredicted RBP13.62□□□□□ -0.23
TREM1-201ENST00000244709 TTC6Q86TZ1 520 aa13.62□□□□□ -0.23
TREM1-201ENST00000244709 CDAN1Q8IWY9 1227 aa13.62□□□□□ -0.23
TREM1-201ENST00000244709 NKX2-3Q8TAU0 364 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms