RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 CCDC170Q8IYT3 715 aa8.42□□□□□ -1.06
RIF1-201ENST00000243326 AMOTL2Q9Y2J4 779 aa8.42□□□□□ -1.06
RIF1-201ENST00000243326 TRAF5O00463 557 aa8.42□□□□□ -1.06
RIF1-201ENST00000243326 PSMA7O14818 248 aa8.42□□□□□ -1.06
RIF1-201ENST00000243326 FAM204AQ9H8W3 233 aa8.42□□□□□ -1.06
RIF1-201ENST00000243326 C2orf54Q08AI8 447 aa8.42□□□□□ -1.06
RIF1-201ENST00000243326 ARHGAP44Q17R89 818 aa8.42□□□□□ -1.06
RIF1-201ENST00000243326 RPAINQ86UA6 219 aa8.42□□□□□ -1.06
RIF1-201ENST00000243326 TTC41PQ6P2S7 1318 aa8.42□□□□□ -1.06
RIF1-201ENST00000243326 PPIP5K1Q6PFW1 1433 aa8.42□□□□□ -1.06
RIF1-201ENST00000243326 ATP11AP98196 1134 aa8.42□□□□□ -1.06
RIF1-201ENST00000243326 CLTAP09496 248 aa8.42□□□□□ -1.06
RIF1-201ENST00000243326 RNF41Q9H4P4 317 aaPredicted RBP8.42□□□□□ -1.06
RIF1-201ENST00000243326 POLD4Q9HCU8 107 aa8.42□□□□□ -1.06
RIF1-201ENST00000243326 PPP2R2CQ9Y2T4 447 aa8.42□□□□□ -1.06
RIF1-201ENST00000243326 RALGAPBQ86X10 1494 aa8.42□□□□□ -1.06
RIF1-201ENST00000243326 KIF21AQ7Z4S6 1674 aa8.42□□□□□ -1.06
RIF1-201ENST00000243326 LARGE1O95461 756 aa8.42□□□□□ -1.06
RIF1-201ENST00000243326 TXKP42681 527 aa8.42□□□□□ -1.06
RIF1-201ENST00000243326 SOS1Q07889 1333 aaPredicted RBP8.42□□□□□ -1.06
RIF1-201ENST00000243326 SLC7A5Q01650 507 aa8.42□□□□□ -1.06
RIF1-201ENST00000243326 FANCLQ9NW38 375 aa8.42□□□□□ -1.06
RIF1-201ENST00000243326 ASIC2Q16515 512 aa8.42□□□□□ -1.06
RIF1-201ENST00000243326 FAM47AQ5JRC9 791 aa8.41□□□□□ -1.06
RIF1-201ENST00000243326 NFATC2IPQ8NCF5 419 aa8.41□□□□□ -1.06
RIF1-201ENST00000243326 LGR6Q9HBX8 967 aa8.41□□□□□ -1.06
RIF1-201ENST00000243326 INTUQ9ULD6 942 aa8.41□□□□□ -1.06
RIF1-201ENST00000243326 IQGAP2Q13576 1575 aa8.41□□□□□ -1.06
RIF1-201ENST00000243326 FAM133BQ5BKY9 247 aaKnown RBP8.41□□□□□ -1.06
RIF1-201ENST00000243326 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.41□□□□□ -1.06
RIF1-201ENST00000243326 ABCB4P21439 1286 aa8.41□□□□□ -1.06
RIF1-201ENST00000243326 C2CD5Q86YS7 1000 aa8.41□□□□□ -1.06
RIF1-201ENST00000243326 CCNT1O60563 726 aaKnown RBP8.41□□□□□ -1.06
RIF1-201ENST00000243326 LRRC8AQ8IWT6 810 aa8.41□□□□□ -1.06
RIF1-201ENST00000243326 MORC4Q8TE76 937 aa8.41□□□□□ -1.06
RIF1-201ENST00000243326 PHF8Q9UPP1 1060 aa8.41□□□□□ -1.06
RIF1-201ENST00000243326 CACTINQ8WUQ7 758 aaKnown RBP8.41□□□□□ -1.06
RIF1-201ENST00000243326 USP27XA6NNY8 438 aa8.41□□□□□ -1.06
RIF1-201ENST00000243326 ADCK5Q3MIX3 580 aa8.41□□□□□ -1.06
RIF1-201ENST00000243326 MIPOL1Q8TD10 442 aa8.41□□□□□ -1.06
RIF1-201ENST00000243326 KCNV2Q8TDN2 545 aa8.41□□□□□ -1.06
RIF1-201ENST00000243326 NFE2L3Q9Y4A8 694 aa8.41□□□□□ -1.06
RIF1-201ENST00000243326 NDUFA8P51970 172 aa8.41□□□□□ -1.06
RIF1-201ENST00000243326 TTC6Q86TZ1 520 aa8.41□□□□□ -1.06
RIF1-201ENST00000243326 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.41□□□□□ -1.06
RIF1-201ENST00000243326 SUCLG2Q96I99 432 aa8.41□□□□□ -1.06
RIF1-201ENST00000243326 FRMD4BQ9Y2L6 1034 aa8.41□□□□□ -1.06
RIF1-201ENST00000243326 USP19O94966 1318 aa8.41□□□□□ -1.06
RIF1-201ENST00000243326 MAGEA1P43355 309 aa8.41□□□□□ -1.06
RIF1-201ENST00000243326 HNRNPH2P55795 449 aaKnown RBP8.41□□□□□ -1.06
RIF1-201ENST00000243326 KRT71Q3SY84 523 aa8.41□□□□□ -1.06
RIF1-201ENST00000243326 CYP26C1Q6V0L0 522 aa8.41□□□□□ -1.06
RIF1-201ENST00000243326 DTHD1Q6ZMT9 781 aa8.41□□□□□ -1.06
RIF1-201ENST00000243326 SLFNL1Q499Z3 407 aa8.41□□□□□ -1.06
RIF1-201ENST00000243326 A0A0D9SFI3 127 aa8.41□□□□□ -1.06
RIF1-201ENST00000243326 PPP2R5AQ15172 486 aa8.41□□□□□ -1.06
RIF1-201ENST00000243326 ZKSCAN8Q15776 578 aaPredicted RBP8.41□□□□□ -1.06
RIF1-201ENST00000243326 ACRBPQ8NEB7 543 aa8.41□□□□□ -1.06
RIF1-201ENST00000243326 SPOPO43791 374 aa8.41□□□□□ -1.06
RIF1-201ENST00000243326 TNIP1Q15025 636 aa8.41□□□□□ -1.06
RIF1-201ENST00000243326 U2AF1L4Q8WU68 220 aaKnown RBP8.41□□□□□ -1.06
RIF1-201ENST00000243326 CABS1Q96KC9 395 aa8.41□□□□□ -1.06
RIF1-201ENST00000243326 KCNQ3O43525 872 aa8.4□□□□□ -1.06
RIF1-201ENST00000243326 PFKFB1P16118 471 aa8.4□□□□□ -1.06
RIF1-201ENST00000243326 PRAG1Q86YV5 1406 aa8.4□□□□□ -1.06
RIF1-201ENST00000243326 TTLL12Q14166 644 aaPredicted RBP8.4□□□□□ -1.06
RIF1-201ENST00000243326 CSGALNACT2Q8N6G5 542 aa8.4□□□□□ -1.06
RIF1-201ENST00000243326 CRNKL1Q9BZJ0 848 aaKnown RBP8.4□□□□□ -1.06
RIF1-201ENST00000243326 NKIRAS1Q9NYS0 192 aa8.4□□□□□ -1.06
RIF1-201ENST00000243326 ATP6V0A2Q9Y487 856 aa8.4□□□□□ -1.06
RIF1-201ENST00000243326 NPHP3Q7Z494 1330 aa8.4□□□□□ -1.06
RIF1-201ENST00000243326 TPD52P55327 224 aaPredicted RBP8.4□□□□□ -1.06
RIF1-201ENST00000243326 RAB34Q9BZG1 259 aa8.4□□□□□ -1.06
RIF1-201ENST00000243326 ZNF500O60304 480 aaPredicted RBP8.4□□□□□ -1.06
RIF1-201ENST00000243326 RRAGAQ7L523 313 aa8.4□□□□□ -1.06
RIF1-201ENST00000243326 SPATA24Q86W54 205 aa8.4□□□□□ -1.06
RIF1-201ENST00000243326 FAM89AQ96GI7 184 aa8.4□□□□□ -1.06
RIF1-201ENST00000243326 SECISBP2LQ93073 1101 aaKnown RBP8.4□□□□□ -1.06
RIF1-201ENST00000243326 MYCBPQ99417 103 aaPredicted RBP8.4□□□□□ -1.06
RIF1-201ENST00000243326 LSM14BQ9BX40 385 aaKnown RBP8.4□□□□□ -1.06
RIF1-201ENST00000243326 KRT40Q6A162 431 aa8.4□□□□□ -1.06
RIF1-201ENST00000243326 TSNARE1Q96NA8 513 aa8.4□□□□□ -1.06
RIF1-201ENST00000243326 FEZ2Q9UHY8 353 aaPredicted RBP8.4□□□□□ -1.06
RIF1-201ENST00000243326 HSPA1LP34931 641 aa8.4□□□□□ -1.06
RIF1-201ENST00000243326 SETDB1Q15047 1291 aa8.4□□□□□ -1.06
RIF1-201ENST00000243326 KSR2Q6VAB6 950 aa8.4□□□□□ -1.06
RIF1-201ENST00000243326 IL16Q14005 1332 aa8.4□□□□□ -1.06
RIF1-201ENST00000243326 DHX32Q7L7V1 743 aaKnown RBP8.4□□□□□ -1.06
RIF1-201ENST00000243326 KCNK3O14649 394 aa8.4□□□□□ -1.07
RIF1-201ENST00000243326 MCM9Q9NXL9 1143 aa8.4□□□□□ -1.07
RIF1-201ENST00000243326 SOWAHDA6NJG2 315 aa8.4□□□□□ -1.07
RIF1-201ENST00000243326 NBPF7P0C2Y1 421 aaPredicted RBP8.4□□□□□ -1.07
RIF1-201ENST00000243326 TNNC1P63316 161 aa8.4□□□□□ -1.07
RIF1-201ENST00000243326 STMN2Q93045 179 aa8.4□□□□□ -1.07
RIF1-201ENST00000243326 ASIC3Q9UHC3 531 aa8.4□□□□□ -1.07
RIF1-201ENST00000243326 BRD1O95696 1058 aa8.39□□□□□ -1.07
RIF1-201ENST00000243326 CA8P35219 290 aa8.39□□□□□ -1.07
RIF1-201ENST00000243326 FOXD4Q12950 439 aaPredicted RBP8.39□□□□□ -1.07
RIF1-201ENST00000243326 RASA3Q14644 834 aa8.39□□□□□ -1.07
RIF1-201ENST00000243326 LRCH2Q5VUJ6 765 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms