RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 CCP110O43303 1012 aa16.15■□□□□ 0.18
SF1-201ENST00000227503 PDIA3P30101 505 aaKnown RBP16.15■□□□□ 0.18
SF1-201ENST00000227503 CDC27P30260 824 aa16.15■□□□□ 0.18
SF1-201ENST00000227503 CHMP4BP1P59074 171 aa16.15■□□□□ 0.18
SF1-201ENST00000227503 BEND6Q5SZJ8 279 aaPredicted RBP16.15■□□□□ 0.18
SF1-201ENST00000227503 SPTLC2O15270 562 aa16.14■□□□□ 0.17
SF1-201ENST00000227503 WDHD1O75717 1129 aaPredicted RBP16.14■□□□□ 0.17
SF1-201ENST00000227503 A1BGP04217 495 aa16.14■□□□□ 0.17
SF1-201ENST00000227503 IFIT1P09914 478 aaKnown RBP16.14■□□□□ 0.17
SF1-201ENST00000227503 MAGEA9P43362 315 aa16.14■□□□□ 0.17
SF1-201ENST00000227503 LRRC31Q6UY01 552 aa16.14■□□□□ 0.17
SF1-201ENST00000227503 ZNF274Q96GC6 653 aaPredicted RBP16.14■□□□□ 0.17
SF1-201ENST00000227503 CARMIL3Q8ND23 1372 aa16.14■□□□□ 0.17
SF1-201ENST00000227503 KIF28PB7ZC32 967 aa16.14■□□□□ 0.17
SF1-201ENST00000227503 M0R2C6 588 aa16.14■□□□□ 0.17
SF1-201ENST00000227503 CIAO1O76071 339 aa16.14■□□□□ 0.17
SF1-201ENST00000227503 GUCY2CP25092 1073 aa16.14■□□□□ 0.17
SF1-201ENST00000227503 PDE4BQ07343 736 aa16.14■□□□□ 0.17
SF1-201ENST00000227503 TEX2Q8IWB9 1127 aa16.14■□□□□ 0.17
SF1-201ENST00000227503 TRMT44Q8IYL2 757 aaKnown RBP16.14■□□□□ 0.17
SF1-201ENST00000227503 GDAP1L1Q96MZ0 367 aa16.14■□□□□ 0.17
SF1-201ENST00000227503 CPDO75976 1380 aa16.14■□□□□ 0.17
SF1-201ENST00000227503 CCDC151A5D8V7 595 aa16.13■□□□□ 0.17
SF1-201ENST00000227503 FOXN1O15353 648 aa16.13■□□□□ 0.17
SF1-201ENST00000227503 CNNM3Q8NE01 707 aa16.13■□□□□ 0.17
SF1-201ENST00000227503 BPIFA3Q9BQP9 254 aa16.13■□□□□ 0.17
SF1-201ENST00000227503 PUS3Q9BZE2 481 aaKnown RBP16.13■□□□□ 0.17
SF1-201ENST00000227503 GEMIN8Q9NWZ8 242 aaKnown RBP16.13■□□□□ 0.17
SF1-201ENST00000227503 PSD3Q9NYI0 1048 aa16.13■□□□□ 0.17
SF1-201ENST00000227503 SOWAHDA6NJG2 315 aa16.13■□□□□ 0.17
SF1-201ENST00000227503 ARHGAP6O43182 974 aa16.13■□□□□ 0.17
SF1-201ENST00000227503 JAKMIP3Q5VZ66 844 aa16.13■□□□□ 0.17
SF1-201ENST00000227503 ATL3Q6DD88 541 aa16.13■□□□□ 0.17
SF1-201ENST00000227503 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.13■□□□□ 0.17
SF1-201ENST00000227503 CPLX3Q8WVH0 158 aa16.13■□□□□ 0.17
SF1-201ENST00000227503 RTEL1Q9NZ71 1219 aa16.13■□□□□ 0.17
SF1-201ENST00000227503 KCPQ6ZWJ8 1503 aa16.13■□□□□ 0.17
SF1-201ENST00000227503 TUBB4AP04350 444 aa16.12■□□□□ 0.17
SF1-201ENST00000227503 VSNL1P62760 191 aa16.12■□□□□ 0.17
SF1-201ENST00000227503 SPECC1Q5M775 1068 aa16.12■□□□□ 0.17
SF1-201ENST00000227503 FBXL16Q8N461 479 aa16.12■□□□□ 0.17
SF1-201ENST00000227503 IQUBQ8NA54 791 aa16.12■□□□□ 0.17
SF1-201ENST00000227503 OSBP2Q969R2 916 aa16.12■□□□□ 0.17
SF1-201ENST00000227503 ZBTB3Q9H5J0 574 aa16.12■□□□□ 0.17
SF1-201ENST00000227503 UBR2Q8IWV8 1755 aa16.12■□□□□ 0.17
SF1-201ENST00000227503 ABL1P00519 1130 aa16.12■□□□□ 0.17
SF1-201ENST00000227503 MYL5Q02045 173 aa16.12■□□□□ 0.17
SF1-201ENST00000227503 ZNF827Q17R98 1081 aa16.12■□□□□ 0.17
SF1-201ENST00000227503 NOM1Q5C9Z4 860 aaKnown RBP16.12■□□□□ 0.17
SF1-201ENST00000227503 CLIC6Q96NY7 704 aa16.12■□□□□ 0.17
SF1-201ENST00000227503 YY1AP1Q9H869 796 aa16.12■□□□□ 0.17
SF1-201ENST00000227503 SPATA31A3Q5VYP0 1347 aa16.12■□□□□ 0.17
SF1-201ENST00000227503 DCCP43146 1447 aa16.12■□□□□ 0.17
SF1-201ENST00000227503 SPEF2Q9C093 1822 aa16.12■□□□□ 0.17
SF1-201ENST00000227503 FOXP2O15409 715 aa16.12■□□□□ 0.17
SF1-201ENST00000227503 TC2NQ8N9U0 490 aa16.12■□□□□ 0.17
SF1-201ENST00000227503 AIFM3Q96NN9 605 aa16.12■□□□□ 0.17
SF1-201ENST00000227503 IVLP07476 585 aa16.11■□□□□ 0.17
SF1-201ENST00000227503 RIN2Q8WYP3 895 aaPredicted RBP16.11■□□□□ 0.17
SF1-201ENST00000227503 FAM204AQ9H8W3 233 aa16.11■□□□□ 0.17
SF1-201ENST00000227503 ERVV-2B6SEH9 535 aa16.11■□□□□ 0.17
SF1-201ENST00000227503 CUTAO60888 179 aa16.11■□□□□ 0.17
SF1-201ENST00000227503 LRRIQ3A6PVS8 624 aaPredicted RBP16.1■□□□□ 0.17
SF1-201ENST00000227503 AXDND1Q5T1B0 1012 aaPredicted RBP16.1■□□□□ 0.17
SF1-201ENST00000227503 HDXQ7Z353 690 aa16.1■□□□□ 0.17
SF1-201ENST00000227503 MICALL1Q8N3F8 863 aa16.1■□□□□ 0.17
SF1-201ENST00000227503 ZCRB1Q8TBF4 217 aaKnown RBP16.1■□□□□ 0.17
SF1-201ENST00000227503 PCDH11XQ9BZA7 1347 aa16.1■□□□□ 0.17
SF1-201ENST00000227503 PCDH11YQ9BZA8 1340 aa16.1■□□□□ 0.17
SF1-201ENST00000227503 A0A1W2PQ27 194 aa16.1■□□□□ 0.17
SF1-201ENST00000227503 A0A1W2PQ64 194 aa16.1■□□□□ 0.17
SF1-201ENST00000227503 A0A1W2PQD8 194 aa16.1■□□□□ 0.17
SF1-201ENST00000227503 ATP2B1P20020 1258 aa16.1■□□□□ 0.17
SF1-201ENST00000227503 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.1■□□□□ 0.17
SF1-201ENST00000227503 HINFPQ9BQA5 517 aa16.1■□□□□ 0.17
SF1-201ENST00000227503 HAND2P61296 217 aa16.09■□□□□ 0.17
SF1-201ENST00000227503 CASP8Q14790 479 aa16.09■□□□□ 0.17
SF1-201ENST00000227503 MYSM1Q5VVJ2 828 aa16.09■□□□□ 0.17
SF1-201ENST00000227503 CTR9Q6PD62 1173 aa16.09■□□□□ 0.17
SF1-201ENST00000227503 SRGAP1Q7Z6B7 1085 aa16.09■□□□□ 0.17
SF1-201ENST00000227503 FOXP4Q8IVH2 680 aaPredicted RBP16.09■□□□□ 0.17
SF1-201ENST00000227503 C8orf76Q96K31 380 aa16.09■□□□□ 0.17
SF1-201ENST00000227503 NCAPGQ9BPX3 1015 aa16.09■□□□□ 0.17
SF1-201ENST00000227503 BMP6P22004 513 aa16.09■□□□□ 0.17
SF1-201ENST00000227503 ADORA1P30542 326 aa16.09■□□□□ 0.17
SF1-201ENST00000227503 SYKP43405 635 aa16.09■□□□□ 0.17
SF1-201ENST00000227503 BRD3Q15059 726 aa16.09■□□□□ 0.17
SF1-201ENST00000227503 LONRF3Q496Y0 759 aa16.09■□□□□ 0.17
SF1-201ENST00000227503 MYCBPQ99417 103 aaPredicted RBP16.09■□□□□ 0.17
SF1-201ENST00000227503 ISCA1Q9BUE6 129 aa16.09■□□□□ 0.17
SF1-201ENST00000227503 CEP126Q9P2H0 1117 aa16.09■□□□□ 0.17
SF1-201ENST00000227503 L1RE1Q9UN81 338 aa16.09■□□□□ 0.17
SF1-201ENST00000227503 IKBKBO14920 756 aa16.09■□□□□ 0.17
SF1-201ENST00000227503 CORO7P57737 925 aa16.09■□□□□ 0.17
SF1-201ENST00000227503 FKBP4Q02790 459 aaKnown RBP eCLIP16.09■□□□□ 0.17
SF1-201ENST00000227503 ZNF569Q5MCW4 686 aa16.09■□□□□ 0.17
SF1-201ENST00000227503 CDC5LQ99459 802 aaKnown RBP16.09■□□□□ 0.17
SF1-201ENST00000227503 NWD2Q9ULI1 1742 aa16.08■□□□□ 0.17
SF1-201ENST00000227503 CBFA2T2O43439 604 aa16.08■□□□□ 0.16
SF1-201ENST00000227503 NKX1-1Q15270 411 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms