RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 USP17L12C9JPN9 530 aa13.67□□□□□ -0.22
TNFAIP1-201ENST00000226225 USP17L21D6R901 530 aa13.67□□□□□ -0.22
TNFAIP1-201ENST00000226225 HMGB1P09429 215 aaKnown RBP13.67□□□□□ -0.22
TNFAIP1-201ENST00000226225 RXRAP19793 462 aa13.67□□□□□ -0.22
TNFAIP1-201ENST00000226225 AOC3Q16853 763 aa13.67□□□□□ -0.22
TNFAIP1-201ENST00000226225 TMC4Q7Z404 712 aa13.67□□□□□ -0.22
TNFAIP1-201ENST00000226225 TGFBRAP1Q8WUH2 860 aa13.67□□□□□ -0.22
TNFAIP1-201ENST00000226225 GPHNQ9NQX3 736 aaPredicted RBP13.67□□□□□ -0.22
TNFAIP1-201ENST00000226225 STOX1Q6ZVD7 989 aa13.66□□□□□ -0.22
TNFAIP1-201ENST00000226225 ZNF771Q7L3S4 317 aaPredicted RBP13.66□□□□□ -0.22
TNFAIP1-201ENST00000226225 RIOK3O14730 519 aaKnown RBP13.66□□□□□ -0.22
TNFAIP1-201ENST00000226225 IFIT3O14879 490 aaKnown RBP13.66□□□□□ -0.22
TNFAIP1-201ENST00000226225 GNAT2P19087 354 aa13.66□□□□□ -0.22
TNFAIP1-201ENST00000226225 SYNE3Q6ZMZ3 975 aa13.66□□□□□ -0.22
TNFAIP1-201ENST00000226225 MAPKAPK5Q8IW41 473 aa13.66□□□□□ -0.22
TNFAIP1-201ENST00000226225 ZSCAN29Q8IWY8 852 aaPredicted RBP13.66□□□□□ -0.22
TNFAIP1-201ENST00000226225 NUP133Q8WUM0 1156 aa13.66□□□□□ -0.22
TNFAIP1-201ENST00000226225 PIBF1Q8WXW3 757 aa13.66□□□□□ -0.22
TNFAIP1-201ENST00000226225 LARGE1O95461 756 aa13.66□□□□□ -0.22
TNFAIP1-201ENST00000226225 NSUN4Q96CB9 384 aaKnown RBP13.66□□□□□ -0.22
TNFAIP1-201ENST00000226225 UBAC1Q9BSL1 405 aa13.66□□□□□ -0.22
TNFAIP1-201ENST00000226225 TPCN1Q9ULQ1 816 aa13.66□□□□□ -0.22
TNFAIP1-201ENST00000226225 RAD21O60216 631 aa13.65□□□□□ -0.22
TNFAIP1-201ENST00000226225 GSTO1P78417 241 aa13.65□□□□□ -0.22
TNFAIP1-201ENST00000226225 DMTNQ08495 405 aa13.65□□□□□ -0.22
TNFAIP1-201ENST00000226225 NAA30Q147X3 362 aaPredicted RBP13.65□□□□□ -0.22
TNFAIP1-201ENST00000226225 GRIK5Q16478 980 aa13.65□□□□□ -0.22
TNFAIP1-201ENST00000226225 ME3Q16798 604 aa13.65□□□□□ -0.22
TNFAIP1-201ENST00000226225 FERMT3Q86UX7 667 aa13.65□□□□□ -0.22
TNFAIP1-201ENST00000226225 ZSCAN31Q96LW9 406 aaPredicted RBP13.65□□□□□ -0.22
TNFAIP1-201ENST00000226225 C16orf45Q96MC5 204 aaPredicted RBP13.65□□□□□ -0.22
TNFAIP1-201ENST00000226225 TM6SF1Q9BZW5 370 aa13.65□□□□□ -0.22
TNFAIP1-201ENST00000226225 N4BP2Q86UW6 1770 aaPredicted RBP13.65□□□□□ -0.22
TNFAIP1-201ENST00000226225 SART3Q15020 963 aaKnown RBP13.65□□□□□ -0.22
TNFAIP1-201ENST00000226225 CCDC125Q86Z20 511 aa13.65□□□□□ -0.22
TNFAIP1-201ENST00000226225 TDRD7Q8NHU6 1098 aaKnown RBP13.65□□□□□ -0.22
TNFAIP1-201ENST00000226225 NCOA5Q9HCD5 579 aaKnown RBP13.65□□□□□ -0.22
TNFAIP1-201ENST00000226225 TAF1P21675 1872 aa13.65□□□□□ -0.22
TNFAIP1-201ENST00000226225 H3BQV1 296 aa13.65□□□□□ -0.22
TNFAIP1-201ENST00000226225 IFFO2Q5TF58 517 aa13.65□□□□□ -0.22
TNFAIP1-201ENST00000226225 MICU3Q86XE3 530 aa13.65□□□□□ -0.22
TNFAIP1-201ENST00000226225 MKNK2Q9HBH9 465 aa13.65□□□□□ -0.22
TNFAIP1-201ENST00000226225 KCNQ5Q9NR82 932 aa13.65□□□□□ -0.22
TNFAIP1-201ENST00000226225 ZNF277Q9NRM2 450 aaPredicted RBP13.65□□□□□ -0.22
TNFAIP1-201ENST00000226225 KLF18A0A0U1RQI7 1052 aa13.64□□□□□ -0.23
TNFAIP1-201ENST00000226225 GSG1L2A8MUP6 293 aa13.64□□□□□ -0.23
TNFAIP1-201ENST00000226225 TMEM67Q5HYA8 995 aa13.64□□□□□ -0.23
TNFAIP1-201ENST00000226225 TEX11Q8IYF3 940 aa13.64□□□□□ -0.23
TNFAIP1-201ENST00000226225 GOLGA8BA8MQT2 603 aa13.64□□□□□ -0.23
TNFAIP1-201ENST00000226225 RAD17O75943 681 aa13.64□□□□□ -0.23
TNFAIP1-201ENST00000226225 SLC16A10Q8TF71 515 aa13.64□□□□□ -0.23
TNFAIP1-201ENST00000226225 COA1Q9GZY4 146 aa13.64□□□□□ -0.23
TNFAIP1-201ENST00000226225 TCRBV5S4A2TA0A5A2 114 aa13.64□□□□□ -0.23
TNFAIP1-201ENST00000226225 SLC3A2P08195 630 aaKnown RBP13.64□□□□□ -0.23
TNFAIP1-201ENST00000226225 GJB2P29033 226 aa13.64□□□□□ -0.23
TNFAIP1-201ENST00000226225 BTDP43251 543 aa13.64□□□□□ -0.23
TNFAIP1-201ENST00000226225 HMGN5P82970 282 aaKnown RBP13.64□□□□□ -0.23
TNFAIP1-201ENST00000226225 LARP1BQ659C4 914 aaKnown RBP13.64□□□□□ -0.23
TNFAIP1-201ENST00000226225 FAM173BQ6P4H8 233 aa13.64□□□□□ -0.23
TNFAIP1-201ENST00000226225 SH2B1Q9NRF2 756 aaPredicted RBP13.64□□□□□ -0.23
TNFAIP1-201ENST00000226225 RFX7Q2KHR2 1363 aa13.64□□□□□ -0.23
TNFAIP1-201ENST00000226225 CCDC69A6NI79 296 aa13.63□□□□□ -0.23
TNFAIP1-201ENST00000226225 SBF2Q86WG5 1849 aa13.63□□□□□ -0.23
TNFAIP1-201ENST00000226225 SLF2Q8IX21 1173 aa13.63□□□□□ -0.23
TNFAIP1-201ENST00000226225 CGNQ9P2M7 1197 aaKnown RBP13.63□□□□□ -0.23
TNFAIP1-201ENST00000226225 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.63□□□□□ -0.23
TNFAIP1-201ENST00000226225 V9GYY5 206 aaPredicted RBP13.63□□□□□ -0.23
TNFAIP1-201ENST00000226225 TBC1D10CQ8IV04 446 aa13.63□□□□□ -0.23
TNFAIP1-201ENST00000226225 CKAP2LQ8IYA6 745 aa13.63□□□□□ -0.23
TNFAIP1-201ENST00000226225 TBC1D22AQ8WUA7 517 aa13.63□□□□□ -0.23
TNFAIP1-201ENST00000226225 MYL10Q9BUA6 226 aa13.63□□□□□ -0.23
TNFAIP1-201ENST00000226225 PPARAQ07869 468 aa13.63□□□□□ -0.23
TNFAIP1-201ENST00000226225 CCDC183Q5T5S1 534 aa13.63□□□□□ -0.23
TNFAIP1-201ENST00000226225 EPB41L4AQ9HCS5 686 aaPredicted RBP13.63□□□□□ -0.23
TNFAIP1-201ENST00000226225 PIM2Q9P1W9 311 aa13.63□□□□□ -0.23
TNFAIP1-201ENST00000226225 ZBTB22O15209 634 aa13.62□□□□□ -0.23
TNFAIP1-201ENST00000226225 PTGS1P23219 599 aa13.62□□□□□ -0.23
TNFAIP1-201ENST00000226225 DNM1Q05193 864 aaKnown RBP13.62□□□□□ -0.23
TNFAIP1-201ENST00000226225 TCP10Q12799 353 aa13.62□□□□□ -0.23
TNFAIP1-201ENST00000226225 RNF41Q9H4P4 317 aaPredicted RBP13.62□□□□□ -0.23
TNFAIP1-201ENST00000226225 COL5A3P25940 1745 aaPredicted RBP13.62□□□□□ -0.23
TNFAIP1-201ENST00000226225 WDR33Q9C0J8 1336 aaKnown RBP13.62□□□□□ -0.23
TNFAIP1-201ENST00000226225 TSPY2A6NKD2 308 aa13.62□□□□□ -0.23
TNFAIP1-201ENST00000226225 SMIM22K7EJ46 135 aa13.62□□□□□ -0.23
TNFAIP1-201ENST00000226225 USP17L8P0C7I0 530 aa13.62□□□□□ -0.23
TNFAIP1-201ENST00000226225 GUCY1B3Q02153 619 aa13.62□□□□□ -0.23
TNFAIP1-201ENST00000226225 STYK1Q6J9G0 422 aa13.62□□□□□ -0.23
TNFAIP1-201ENST00000226225 SH3RF3Q8TEJ3 882 aaPredicted RBP13.62□□□□□ -0.23
TNFAIP1-201ENST00000226225 TTC14Q96N46 770 aa13.62□□□□□ -0.23
TNFAIP1-201ENST00000226225 AP5Z1O43299 807 aa13.62□□□□□ -0.23
TNFAIP1-201ENST00000226225 LRMPQ12912 555 aa13.62□□□□□ -0.23
TNFAIP1-201ENST00000226225 AKNAD1Q5T1N1 836 aa13.62□□□□□ -0.23
TNFAIP1-201ENST00000226225 RBM26Q5T8P6 1007 aaKnown RBP13.62□□□□□ -0.23
TNFAIP1-201ENST00000226225 ECE2O60344 883 aa13.61□□□□□ -0.23
TNFAIP1-201ENST00000226225 CYP2D6P10635 497 aa13.61□□□□□ -0.23
TNFAIP1-201ENST00000226225 ATP2B2Q01814 1243 aa13.61□□□□□ -0.23
TNFAIP1-201ENST00000226225 CCDC93Q567U6 631 aa13.61□□□□□ -0.23
TNFAIP1-201ENST00000226225 FAM47AQ5JRC9 791 aa13.61□□□□□ -0.23
TNFAIP1-201ENST00000226225 PRIMPOLQ96LW4 560 aa13.61□□□□□ -0.23
TNFAIP1-201ENST00000226225 MTFR1LQ9H019 292 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms