RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 KRT27Q7Z3Y8 459 aa20.8■□□□□ 0.92
CLIP2-201ENST00000223398 ZBTB38Q8NAP3 1195 aaPredicted RBP20.8■□□□□ 0.92
CLIP2-201ENST00000223398 FNBP1Q96RU3 617 aa20.8■□□□□ 0.92
CLIP2-201ENST00000223398 NLGN1Q8N2Q7 840 aa20.8■□□□□ 0.92
CLIP2-201ENST00000223398 USP17L12C9JPN9 530 aa20.8■□□□□ 0.92
CLIP2-201ENST00000223398 USP17L21D6R901 530 aa20.8■□□□□ 0.92
CLIP2-201ENST00000223398 CERS3Q8IU89 383 aa20.8■□□□□ 0.92
CLIP2-201ENST00000223398 CCDC50Q8IVM0 306 aa20.8■□□□□ 0.92
CLIP2-201ENST00000223398 DIS3L2Q8IYB7 885 aaKnown RBP20.8■□□□□ 0.92
CLIP2-201ENST00000223398 MAPK8IP1Q9UQF2 711 aa20.8■□□□□ 0.92
CLIP2-201ENST00000223398 ZBTB1Q9Y2K1 713 aa20.8■□□□□ 0.92
CLIP2-201ENST00000223398 GOLGA6L9A6NEM1 432 aa20.79■□□□□ 0.92
CLIP2-201ENST00000223398 SORBS3O60504 671 aa20.79■□□□□ 0.92
CLIP2-201ENST00000223398 PLCB3Q01970 1234 aa20.79■□□□□ 0.92
CLIP2-201ENST00000223398 CHRNDQ07001 517 aa20.79■□□□□ 0.92
CLIP2-201ENST00000223398 SMC1AQ14683 1233 aaKnown RBP20.79■□□□□ 0.92
CLIP2-201ENST00000223398 UVSSAQ2YD98 709 aa20.79■□□□□ 0.92
CLIP2-201ENST00000223398 CCDC186Q7Z3E2 898 aa20.79■□□□□ 0.92
CLIP2-201ENST00000223398 OTUD6BQ8N6M0 293 aa20.79■□□□□ 0.92
CLIP2-201ENST00000223398 PLVAPQ9BX97 442 aa20.79■□□□□ 0.92
CLIP2-201ENST00000223398 FSD2A1L4K1 749 aa20.79■□□□□ 0.92
CLIP2-201ENST00000223398 TYRO3Q06418 890 aa20.79■□□□□ 0.92
CLIP2-201ENST00000223398 SDR42E1Q8WUS8 393 aa20.79■□□□□ 0.92
CLIP2-201ENST00000223398 EFCAB6Q5THR3 1501 aa20.79■□□□□ 0.92
CLIP2-201ENST00000223398 RAD51AP2Q09MP3 1159 aa20.79■□□□□ 0.92
CLIP2-201ENST00000223398 ZNF526Q8TF50 670 aaPredicted RBP20.79■□□□□ 0.92
CLIP2-201ENST00000223398 CARD10Q9BWT7 1032 aa20.79■□□□□ 0.92
CLIP2-201ENST00000223398 UGGT1Q9NYU2 1555 aa20.79■□□□□ 0.92
CLIP2-201ENST00000223398 ATP2B4P23634 1241 aa20.79■□□□□ 0.92
CLIP2-201ENST00000223398 FRMD4BQ9Y2L6 1034 aa20.79■□□□□ 0.92
CLIP2-201ENST00000223398 PLEKHG1Q9ULL1 1385 aa20.78■□□□□ 0.92
CLIP2-201ENST00000223398 SKILP12757 684 aa20.78■□□□□ 0.92
CLIP2-201ENST00000223398 KRT5P13647 590 aa20.78■□□□□ 0.92
CLIP2-201ENST00000223398 EHBP1Q8NDI1 1231 aa20.78■□□□□ 0.92
CLIP2-201ENST00000223398 KCNJ14Q9UNX9 436 aa20.78■□□□□ 0.92
CLIP2-201ENST00000223398 ATF5Q9Y2D1 282 aaPredicted RBP20.78■□□□□ 0.92
CLIP2-201ENST00000223398 GOLGA6L10A0A0M3HER8 536 aa20.78■□□□□ 0.92
CLIP2-201ENST00000223398 ARHGEF35A5YM69 484 aa20.78■□□□□ 0.92
CLIP2-201ENST00000223398 SMTNP53814 917 aa20.78■□□□□ 0.92
CLIP2-201ENST00000223398 RILPL1Q5EBL4 403 aa20.78■□□□□ 0.92
CLIP2-201ENST00000223398 GREM2Q9H772 168 aa20.78■□□□□ 0.92
CLIP2-201ENST00000223398 IBTKQ9P2D0 1353 aaPredicted RBP20.78■□□□□ 0.92
CLIP2-201ENST00000223398 PPARAQ07869 468 aa20.78■□□□□ 0.92
CLIP2-201ENST00000223398 PDE4DQ08499 809 aa20.78■□□□□ 0.92
CLIP2-201ENST00000223398 FAM173BQ6P4H8 233 aa20.78■□□□□ 0.92
CLIP2-201ENST00000223398 AZI2Q9H6S1 392 aa20.78■□□□□ 0.92
CLIP2-201ENST00000223398 IKBKGQ9Y6K9 419 aa20.78■□□□□ 0.92
CLIP2-201ENST00000223398 SGSM2O43147 1006 aa20.78■□□□□ 0.92
CLIP2-201ENST00000223398 CNKSR1Q969H4 720 aa20.78■□□□□ 0.92
CLIP2-201ENST00000223398 INSRP06213 1382 aa20.78■□□□□ 0.92
CLIP2-201ENST00000223398 TNFAIP1Q13829 316 aa20.78■□□□□ 0.92
CLIP2-201ENST00000223398 MAP3K15Q6ZN16 1313 aa20.77■□□□□ 0.92
CLIP2-201ENST00000223398 IFT74Q96LB3 600 aa20.77■□□□□ 0.92
CLIP2-201ENST00000223398 GADL1Q6ZQY3 521 aa20.77■□□□□ 0.92
CLIP2-201ENST00000223398 CCDC42Q96M95 316 aa20.77■□□□□ 0.92
CLIP2-201ENST00000223398 TRIM6Q9C030 488 aaPredicted RBP20.77■□□□□ 0.92
CLIP2-201ENST00000223398 NPC1L1Q9UHC9 1359 aa20.77■□□□□ 0.92
CLIP2-201ENST00000223398 PLCD1P51178 756 aa20.77■□□□□ 0.92
CLIP2-201ENST00000223398 PROSER3Q2NL68 480 aa20.77■□□□□ 0.92
CLIP2-201ENST00000223398 GSTA5Q7RTV2 222 aa20.77■□□□□ 0.92
CLIP2-201ENST00000223398 CTNND2Q9UQB3 1225 aa20.77■□□□□ 0.92
CLIP2-201ENST00000223398 CEP83Q9Y592 693 aa20.77■□□□□ 0.92
CLIP2-201ENST00000223398 RPL13P26373 211 aaKnown RBP20.77■□□□□ 0.91
CLIP2-201ENST00000223398 POLR3GO15318 223 aaPredicted RBP20.76■□□□□ 0.91
CLIP2-201ENST00000223398 HAUS3Q68CZ6 603 aa20.76■□□□□ 0.91
CLIP2-201ENST00000223398 CMTR1Q8N1G2 835 aaKnown RBP20.76■□□□□ 0.91
CLIP2-201ENST00000223398 USP44Q9H0E7 712 aa20.76■□□□□ 0.91
CLIP2-201ENST00000223398 FRMPD2Q68DX3 1309 aaPredicted RBP20.76■□□□□ 0.91
CLIP2-201ENST00000223398 NONOQ15233 471 aaKnown RBP eCLIP20.76■□□□□ 0.91
CLIP2-201ENST00000223398 TTC38Q5R3I4 469 aa20.76■□□□□ 0.91
CLIP2-201ENST00000223398 ARHGEF25Q86VW2 580 aa20.76■□□□□ 0.91
CLIP2-201ENST00000223398 DCPSQ96C86 337 aaKnown RBP20.76■□□□□ 0.91
CLIP2-201ENST00000223398 SSX2IPQ9Y2D8 614 aa20.76■□□□□ 0.91
CLIP2-201ENST00000223398 ARL1P40616 181 aaPredicted RBP20.76■□□□□ 0.91
CLIP2-201ENST00000223398 TBC1D7Q9P0N9 293 aa20.76■□□□□ 0.91
CLIP2-201ENST00000223398 KDRP35968 1356 aa20.76■□□□□ 0.91
CLIP2-201ENST00000223398 ARID4AP29374 1257 aaPredicted RBP20.76■□□□□ 0.91
CLIP2-201ENST00000223398 TSNARE1Q96NA8 513 aa20.76■□□□□ 0.91
CLIP2-201ENST00000223398 NLRP1Q9C000 1473 aa20.76■□□□□ 0.91
CLIP2-201ENST00000223398 PRAMEF22A3QJZ6 481 aa20.75■□□□□ 0.91
CLIP2-201ENST00000223398 BTDP43251 543 aa20.75■□□□□ 0.91
CLIP2-201ENST00000223398 STRN3Q13033 797 aa20.75■□□□□ 0.91
CLIP2-201ENST00000223398 SULF1Q8IWU6 871 aa20.75■□□□□ 0.91
CLIP2-201ENST00000223398 PCCAP05165 728 aaPredicted RBP20.75■□□□□ 0.91
CLIP2-201ENST00000223398 ERCC3P19447 782 aa20.75■□□□□ 0.91
CLIP2-201ENST00000223398 MRPS9P82933 396 aaKnown RBP20.75■□□□□ 0.91
CLIP2-201ENST00000223398 SNX29Q8TEQ0 813 aa20.75■□□□□ 0.91
CLIP2-201ENST00000223398 APBB1IPQ7Z5R6 666 aaPredicted RBP20.75■□□□□ 0.91
CLIP2-201ENST00000223398 MLH3Q9UHC1 1453 aa20.75■□□□□ 0.91
CLIP2-201ENST00000223398 CLRN2A0PK11 232 aa20.75■□□□□ 0.91
CLIP2-201ENST00000223398 PPEF1O14829 653 aaPredicted RBP20.75■□□□□ 0.91
CLIP2-201ENST00000223398 SERPINB2P05120 415 aa20.75■□□□□ 0.91
CLIP2-201ENST00000223398 ANO1Q5XXA6 986 aa20.75■□□□□ 0.91
CLIP2-201ENST00000223398 VPS54Q9P1Q0 977 aa20.75■□□□□ 0.91
CLIP2-201ENST00000223398 ROBO2Q9HCK4 1378 aa20.74■□□□□ 0.91
CLIP2-201ENST00000223398 LRRC47Q8N1G4 583 aaKnown RBP20.74■□□□□ 0.91
CLIP2-201ENST00000223398 TTC12Q9H892 705 aaPredicted RBP20.74■□□□□ 0.91
CLIP2-201ENST00000223398 ARPP21Q9UBL0 812 aaPredicted RBP20.74■□□□□ 0.91
CLIP2-201ENST00000223398 DNAI1Q9UI46 699 aa20.74■□□□□ 0.91
CLIP2-201ENST00000223398 PROCA1Q8NCQ7 364 aaPredicted RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms