RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 KIAA2012Q0VF49 1180 aa10.36□□□□□ -0.75
MTHFD1-201ENST00000216605 DCAF8Q5TAQ9 597 aa10.36□□□□□ -0.75
MTHFD1-201ENST00000216605 TXNRD3Q86VQ6 643 aa10.36□□□□□ -0.75
MTHFD1-201ENST00000216605 MB21D2Q8IYB1 491 aaPredicted RBP10.36□□□□□ -0.75
MTHFD1-201ENST00000216605 CCDC82Q8N4S0 544 aa10.36□□□□□ -0.75
MTHFD1-201ENST00000216605 CEP120Q8N960 986 aa10.36□□□□□ -0.75
MTHFD1-201ENST00000216605 NSUN7Q8NE18 718 aaKnown RBP10.36□□□□□ -0.75
MTHFD1-201ENST00000216605 NOL10Q9BSC4 688 aaKnown RBP10.36□□□□□ -0.75
MTHFD1-201ENST00000216605 UBAC1Q9BSL1 405 aa10.36□□□□□ -0.75
MTHFD1-201ENST00000216605 MYL10Q9BUA6 226 aa10.36□□□□□ -0.75
MTHFD1-201ENST00000216605 ORC3Q9UBD5 711 aaPredicted RBP10.36□□□□□ -0.75
MTHFD1-201ENST00000216605 ANGEL1Q9UNK9 670 aaKnown RBP10.36□□□□□ -0.75
MTHFD1-201ENST00000216605 AKNAD1Q5T1N1 836 aa10.35□□□□□ -0.75
MTHFD1-201ENST00000216605 MSL1Q68DK7 614 aa10.35□□□□□ -0.75
MTHFD1-201ENST00000216605 CYB5R4Q7L1T6 521 aa10.35□□□□□ -0.75
MTHFD1-201ENST00000216605 RNF214Q8ND24 703 aa10.35□□□□□ -0.75
MTHFD1-201ENST00000216605 NUP133Q8WUM0 1156 aa10.35□□□□□ -0.75
MTHFD1-201ENST00000216605 LLPHQ9BRT6 129 aaKnown RBP10.35□□□□□ -0.75
MTHFD1-201ENST00000216605 EPB41L4AQ9HCS5 686 aaPredicted RBP10.35□□□□□ -0.75
MTHFD1-201ENST00000216605 RANBP6O60518 1105 aaKnown RBP10.35□□□□□ -0.75
MTHFD1-201ENST00000216605 RXRBP28702 533 aa10.35□□□□□ -0.75
MTHFD1-201ENST00000216605 PRDX5P30044 214 aa10.35□□□□□ -0.75
MTHFD1-201ENST00000216605 UBE2HP62256 183 aa10.35□□□□□ -0.75
MTHFD1-201ENST00000216605 SLC51AQ86UW1 340 aa10.35□□□□□ -0.75
MTHFD1-201ENST00000216605 BICD2Q8TD16 824 aa10.35□□□□□ -0.75
MTHFD1-201ENST00000216605 KRT23Q9C075 422 aa10.35□□□□□ -0.75
MTHFD1-201ENST00000216605 CNNM2Q9H8M5 875 aa10.35□□□□□ -0.75
MTHFD1-201ENST00000216605 SLC12A7Q9Y666 1083 aa10.35□□□□□ -0.75
MTHFD1-201ENST00000216605 NEDD4P46934 1319 aa10.35□□□□□ -0.75
MTHFD1-201ENST00000216605 PRDM1O75626 825 aa10.34□□□□□ -0.75
MTHFD1-201ENST00000216605 ANTXR2P58335 489 aa10.34□□□□□ -0.75
MTHFD1-201ENST00000216605 OTUD7BQ6GQQ9 843 aa10.34□□□□□ -0.75
MTHFD1-201ENST00000216605 ZNF804AQ7Z570 1209 aa10.34□□□□□ -0.75
MTHFD1-201ENST00000216605 ADGRA1Q86SQ6 560 aa10.34□□□□□ -0.75
MTHFD1-201ENST00000216605 C8orf76Q96K31 380 aa10.34□□□□□ -0.75
MTHFD1-201ENST00000216605 TSPY26PQ9H489 355 aa10.34□□□□□ -0.75
MTHFD1-201ENST00000216605 RNF41Q9H4P4 317 aaPredicted RBP10.34□□□□□ -0.75
MTHFD1-201ENST00000216605 GOLGA8AA7E2F4 631 aa10.34□□□□□ -0.75
MTHFD1-201ENST00000216605 ZBTB43O43298 467 aa10.34□□□□□ -0.75
MTHFD1-201ENST00000216605 MECOMQ03112 1051 aa10.34□□□□□ -0.75
MTHFD1-201ENST00000216605 FBXO33Q7Z6M2 555 aa10.34□□□□□ -0.75
MTHFD1-201ENST00000216605 EGFL6Q8IUX8 553 aa10.34□□□□□ -0.75
MTHFD1-201ENST00000216605 ZSWIM5Q9P217 1185 aa10.34□□□□□ -0.75
MTHFD1-201ENST00000216605 COL5A3P25940 1745 aaPredicted RBP10.34□□□□□ -0.75
MTHFD1-201ENST00000216605 RIMBP2O15034 1052 aa10.33□□□□□ -0.76
MTHFD1-201ENST00000216605 LDHBP07195 334 aaKnown RBP10.33□□□□□ -0.76
MTHFD1-201ENST00000216605 TM4SF1P30408 202 aa10.33□□□□□ -0.76
MTHFD1-201ENST00000216605 ADD1P35611 737 aaKnown RBP10.33□□□□□ -0.76
MTHFD1-201ENST00000216605 USP5P45974 858 aa10.33□□□□□ -0.76
MTHFD1-201ENST00000216605 SETQ01105 290 aaPredicted RBP10.33□□□□□ -0.76
MTHFD1-201ENST00000216605 PPARAQ07869 468 aa10.33□□□□□ -0.76
MTHFD1-201ENST00000216605 SPTY2D1Q68D10 685 aaPredicted RBP10.33□□□□□ -0.76
MTHFD1-201ENST00000216605 CRNKL1Q9BZJ0 848 aaKnown RBP10.33□□□□□ -0.76
MTHFD1-201ENST00000216605 SCAND2PQ9GZW5 306 aaPredicted RBP10.33□□□□□ -0.76
MTHFD1-201ENST00000216605 GGA1Q9UJY5 639 aa10.33□□□□□ -0.76
MTHFD1-201ENST00000216605 XDHP47989 1333 aa10.33□□□□□ -0.76
MTHFD1-201ENST00000216605 THSD7AQ9UPZ6 1657 aa10.33□□□□□ -0.76
MTHFD1-201ENST00000216605 DDX60Q8IY21 1712 aaKnown RBP10.33□□□□□ -0.76
MTHFD1-201ENST00000216605 AKAP11Q9UKA4 1901 aa10.33□□□□□ -0.76
MTHFD1-201ENST00000216605 CYP2D7A0A087X1C5 515 aa10.33□□□□□ -0.76
MTHFD1-201ENST00000216605 SEMA3EO15041 775 aa10.33□□□□□ -0.76
MTHFD1-201ENST00000216605 WTAPQ15007 396 aa10.33□□□□□ -0.76
MTHFD1-201ENST00000216605 ZNF219Q9P2Y4 722 aaPredicted RBP10.33□□□□□ -0.76
MTHFD1-201ENST00000216605 LEMD3Q9Y2U8 911 aa10.33□□□□□ -0.76
MTHFD1-201ENST00000216605 CTDNEP1O95476 244 aa10.33□□□□□ -0.76
MTHFD1-201ENST00000216605 HMGB2P26583 209 aaKnown RBP10.33□□□□□ -0.76
MTHFD1-201ENST00000216605 TRIM29Q14134 588 aa10.33□□□□□ -0.76
MTHFD1-201ENST00000216605 ALX1Q15699 326 aa10.33□□□□□ -0.76
MTHFD1-201ENST00000216605 TMEM87BQ96K49 555 aa10.33□□□□□ -0.76
MTHFD1-201ENST00000216605 NBPF3Q9H094 633 aa10.33□□□□□ -0.76
MTHFD1-201ENST00000216605 ZSCAN16Q9H4T2 348 aaPredicted RBP10.33□□□□□ -0.76
MTHFD1-201ENST00000216605 CFAP45Q9UL16 551 aa10.33□□□□□ -0.76
MTHFD1-201ENST00000216605 NHSQ6T4R5 1651 aa10.33□□□□□ -0.76
MTHFD1-201ENST00000216605 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.32□□□□□ -0.76
MTHFD1-201ENST00000216605 CDKL5O76039 1030 aa10.32□□□□□ -0.76
MTHFD1-201ENST00000216605 POLR3DP05423 398 aaPredicted RBP10.32□□□□□ -0.76
MTHFD1-201ENST00000216605 GPSM2P81274 684 aa10.32□□□□□ -0.76
MTHFD1-201ENST00000216605 SF3A1Q15459 793 aaKnown RBP10.32□□□□□ -0.76
MTHFD1-201ENST00000216605 TMCO4Q5TGY1 634 aa10.32□□□□□ -0.76
MTHFD1-201ENST00000216605 GPATCH11Q8N954 259 aa10.32□□□□□ -0.76
MTHFD1-201ENST00000216605 PRIMPOLQ96LW4 560 aa10.32□□□□□ -0.76
MTHFD1-201ENST00000216605 EP400Q96L91 3159 aa10.32□□□□□ -0.76
MTHFD1-201ENST00000216605 USP17L12C9JPN9 530 aa10.32□□□□□ -0.76
MTHFD1-201ENST00000216605 USP17L21D6R901 530 aa10.32□□□□□ -0.76
MTHFD1-201ENST00000216605 PROM2Q8N271 834 aa10.32□□□□□ -0.76
MTHFD1-201ENST00000216605 NLGN1Q8N2Q7 840 aa10.32□□□□□ -0.76
MTHFD1-201ENST00000216605 ESR2Q92731 530 aa10.32□□□□□ -0.76
MTHFD1-201ENST00000216605 PHKBQ93100 1093 aa10.32□□□□□ -0.76
MTHFD1-201ENST00000216605 AGXT2Q9BYV1 514 aa10.32□□□□□ -0.76
MTHFD1-201ENST00000216605 SENP2Q9HC62 589 aa10.32□□□□□ -0.76
MTHFD1-201ENST00000216605 PARP3Q9Y6F1 533 aa10.32□□□□□ -0.76
MTHFD1-201ENST00000216605 MYO5AQ9Y4I1 1855 aaKnown RBP10.32□□□□□ -0.76
MTHFD1-201ENST00000216605 PNPLA7Q6ZV29 1317 aa10.32□□□□□ -0.76
MTHFD1-201ENST00000216605 TCHHQ07283 1943 aa10.31□□□□□ -0.76
MTHFD1-201ENST00000216605 SH2B2O14492 632 aaPredicted RBP10.31□□□□□ -0.76
MTHFD1-201ENST00000216605 IARSP41252 1262 aaKnown RBP10.31□□□□□ -0.76
MTHFD1-201ENST00000216605 DDR1Q08345 913 aa10.31□□□□□ -0.76
MTHFD1-201ENST00000216605 UVSSAQ2YD98 709 aa10.31□□□□□ -0.76
MTHFD1-201ENST00000216605 NBPF20Q3BBV1 942 aa10.31□□□□□ -0.76
MTHFD1-201ENST00000216605 TTC6Q86TZ1 520 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms