RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 HIBADHP31937 336 aaKnown RBP9.29□□□□□ -0.92
HMGXB4-201ENST00000216106 HSPA1LP34931 641 aa9.29□□□□□ -0.92
HMGXB4-201ENST00000216106 KIF23Q02241 960 aaPredicted RBP9.29□□□□□ -0.92
HMGXB4-201ENST00000216106 NFIXQ14938 502 aa9.29□□□□□ -0.92
HMGXB4-201ENST00000216106 MYSM1Q5VVJ2 828 aa9.29□□□□□ -0.92
HMGXB4-201ENST00000216106 RBM43Q6ZSC3 357 aaKnown RBP9.29□□□□□ -0.92
HMGXB4-201ENST00000216106 MPNDQ8N594 471 aa9.29□□□□□ -0.92
HMGXB4-201ENST00000216106 WTAPQ15007 396 aa9.29□□□□□ -0.92
HMGXB4-201ENST00000216106 SART3Q15020 963 aaKnown RBP9.29□□□□□ -0.92
HMGXB4-201ENST00000216106 ANO6Q4KMQ2 910 aa9.29□□□□□ -0.92
HMGXB4-201ENST00000216106 KLHL34Q8N239 644 aa9.29□□□□□ -0.92
HMGXB4-201ENST00000216106 ANKRD2Q9GZV1 360 aa9.29□□□□□ -0.92
HMGXB4-201ENST00000216106 RTEL1Q9NZ71 1219 aa9.29□□□□□ -0.92
HMGXB4-201ENST00000216106 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.29□□□□□ -0.92
HMGXB4-201ENST00000216106 CCDC39Q9UFE4 941 aa9.29□□□□□ -0.92
HMGXB4-201ENST00000216106 NOL7Q9UMY1 257 aaKnown RBP9.29□□□□□ -0.92
HMGXB4-201ENST00000216106 PRDX5P30044 214 aa9.29□□□□□ -0.92
HMGXB4-201ENST00000216106 IARSP41252 1262 aaKnown RBP9.29□□□□□ -0.92
HMGXB4-201ENST00000216106 MECOMQ03112 1051 aa9.29□□□□□ -0.92
HMGXB4-201ENST00000216106 BRAPQ7Z569 592 aa9.29□□□□□ -0.92
HMGXB4-201ENST00000216106 RNF41Q9H4P4 317 aaPredicted RBP9.29□□□□□ -0.92
HMGXB4-201ENST00000216106 PCDHA7Q9UN72 937 aa9.29□□□□□ -0.92
HMGXB4-201ENST00000216106 ERICH2A1L162 156 aa9.28□□□□□ -0.92
HMGXB4-201ENST00000216106 STK38Q15208 465 aa9.28□□□□□ -0.92
HMGXB4-201ENST00000216106 KRT40Q6A162 431 aa9.28□□□□□ -0.92
HMGXB4-201ENST00000216106 SYNE3Q6ZMZ3 975 aa9.28□□□□□ -0.92
HMGXB4-201ENST00000216106 CCDC73Q6ZRK6 1079 aa9.28□□□□□ -0.92
HMGXB4-201ENST00000216106 FSIP1Q8NA03 581 aa9.28□□□□□ -0.92
HMGXB4-201ENST00000216106 CNBD1Q8NA66 436 aa9.28□□□□□ -0.92
HMGXB4-201ENST00000216106 LINC00301Q8NCQ3 95 aa9.28□□□□□ -0.92
HMGXB4-201ENST00000216106 FAM200AQ8TCP9 573 aa9.28□□□□□ -0.92
HMGXB4-201ENST00000216106 NSUN4Q96CB9 384 aaKnown RBP9.28□□□□□ -0.92
HMGXB4-201ENST00000216106 SLC26A6Q9BXS9 759 aa9.28□□□□□ -0.92
HMGXB4-201ENST00000216106 CCDC88AQ3V6T2 1871 aa9.28□□□□□ -0.92
HMGXB4-201ENST00000216106 AP5Z1O43299 807 aa9.28□□□□□ -0.92
HMGXB4-201ENST00000216106 SNW1Q13573 536 aaKnown RBP9.28□□□□□ -0.92
HMGXB4-201ENST00000216106 SF3A1Q15459 793 aaKnown RBP9.28□□□□□ -0.92
HMGXB4-201ENST00000216106 LUZP1Q86V48 1076 aa9.28□□□□□ -0.92
HMGXB4-201ENST00000216106 CCDC82Q8N4S0 544 aa9.28□□□□□ -0.92
HMGXB4-201ENST00000216106 AATFQ9NY61 560 aaKnown RBP eCLIP9.28□□□□□ -0.92
HMGXB4-201ENST00000216106 DUOX1Q9NRD9 1551 aa9.28□□□□□ -0.92
HMGXB4-201ENST00000216106 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.28□□□□□ -0.92
HMGXB4-201ENST00000216106 SEMA3EO15041 775 aa9.28□□□□□ -0.92
HMGXB4-201ENST00000216106 SASS6Q6UVJ0 657 aa9.28□□□□□ -0.92
HMGXB4-201ENST00000216106 CMTR1Q8N1G2 835 aaKnown RBP9.28□□□□□ -0.92
HMGXB4-201ENST00000216106 UBAC1Q9BSL1 405 aa9.28□□□□□ -0.92
HMGXB4-201ENST00000216106 POLR3EQ9NVU0 708 aa9.28□□□□□ -0.92
HMGXB4-201ENST00000216106 ANKIB1Q9P2G1 1089 aa9.28□□□□□ -0.92
HMGXB4-201ENST00000216106 TRPC5Q9UL62 973 aaPredicted RBP9.28□□□□□ -0.92
HMGXB4-201ENST00000216106 UBR3Q6ZT12 1888 aa9.28□□□□□ -0.92
HMGXB4-201ENST00000216106 PRDM1O75626 825 aa9.28□□□□□ -0.92
HMGXB4-201ENST00000216106 GNL2Q13823 731 aaKnown RBP9.28□□□□□ -0.92
HMGXB4-201ENST00000216106 NUP133Q8WUM0 1156 aa9.28□□□□□ -0.92
HMGXB4-201ENST00000216106 ZKSCAN5Q9Y2L8 839 aa9.28□□□□□ -0.92
HMGXB4-201ENST00000216106 TNKSO95271 1327 aa9.27□□□□□ -0.93
HMGXB4-201ENST00000216106 KINO60870 393 aaKnown RBP9.27□□□□□ -0.93
HMGXB4-201ENST00000216106 EVX2Q03828 476 aa9.27□□□□□ -0.93
HMGXB4-201ENST00000216106 FAM160A1Q05DH4 1040 aa9.27□□□□□ -0.93
HMGXB4-201ENST00000216106 SSRP1Q08945 709 aaKnown RBP9.27□□□□□ -0.93
HMGXB4-201ENST00000216106 RTN1Q16799 776 aa9.27□□□□□ -0.93
HMGXB4-201ENST00000216106 BCL11BQ9C0K0 894 aaPredicted RBP9.27□□□□□ -0.93
HMGXB4-201ENST00000216106 DNAJC25Q9H1X3 360 aa9.27□□□□□ -0.93
HMGXB4-201ENST00000216106 ANAPC4Q9UJX5 808 aa9.27□□□□□ -0.93
HMGXB4-201ENST00000216106 MAST2Q6P0Q8 1798 aa9.27□□□□□ -0.93
HMGXB4-201ENST00000216106 A0A1B0GVL5 298 aa9.27□□□□□ -0.93
HMGXB4-201ENST00000216106 ONECUT3O60422 494 aaPredicted RBP9.27□□□□□ -0.93
HMGXB4-201ENST00000216106 GUCY1A2P33402 732 aa9.27□□□□□ -0.93
HMGXB4-201ENST00000216106 ENGASEQ8NFI3 743 aa9.27□□□□□ -0.93
HMGXB4-201ENST00000216106 KCNG4Q8TDN1 519 aa9.27□□□□□ -0.93
HMGXB4-201ENST00000216106 MRPS27Q92552 414 aaKnown RBP9.27□□□□□ -0.93
HMGXB4-201ENST00000216106 ESR2Q92731 530 aa9.27□□□□□ -0.93
HMGXB4-201ENST00000216106 CBX8Q9HC52 389 aa9.27□□□□□ -0.93
HMGXB4-201ENST00000216106 SPTLC2O15270 562 aa9.27□□□□□ -0.93
HMGXB4-201ENST00000216106 YEATS4O95619 227 aa9.27□□□□□ -0.93
HMGXB4-201ENST00000216106 GRAPQ13588 217 aa9.27□□□□□ -0.93
HMGXB4-201ENST00000216106 TRIM29Q14134 588 aa9.27□□□□□ -0.93
HMGXB4-201ENST00000216106 ADALQ6DHV7 355 aa9.27□□□□□ -0.93
HMGXB4-201ENST00000216106 ZNF654Q8IZM8 581 aa9.27□□□□□ -0.93
HMGXB4-201ENST00000216106 GRAPLQ8TC17 118 aaPredicted RBP9.27□□□□□ -0.93
HMGXB4-201ENST00000216106 BRIP1Q9BX63 1249 aa9.27□□□□□ -0.93
HMGXB4-201ENST00000216106 MYH6P13533 1939 aa9.26□□□□□ -0.93
HMGXB4-201ENST00000216106 FMNL1O95466 1100 aaPredicted RBP9.26□□□□□ -0.93
HMGXB4-201ENST00000216106 IFNAR1P17181 557 aa9.26□□□□□ -0.93
HMGXB4-201ENST00000216106 ANO1Q5XXA6 986 aa9.26□□□□□ -0.93
HMGXB4-201ENST00000216106 ERCC4Q92889 916 aaPredicted RBP9.26□□□□□ -0.93
HMGXB4-201ENST00000216106 GPR101Q96P66 508 aaPredicted RBP9.26□□□□□ -0.93
HMGXB4-201ENST00000216106 NID2Q14112 1375 aa9.26□□□□□ -0.93
HMGXB4-201ENST00000216106 LAMB1P07942 1786 aa9.26□□□□□ -0.93
HMGXB4-201ENST00000216106 STK36Q9NRP7 1315 aa9.26□□□□□ -0.93
HMGXB4-201ENST00000216106 IRS2Q9Y4H2 1338 aa9.26□□□□□ -0.93
HMGXB4-201ENST00000216106 A0A087WWV3 80 aa9.26□□□□□ -0.93
HMGXB4-201ENST00000216106 USP17L12C9JPN9 530 aa9.26□□□□□ -0.93
HMGXB4-201ENST00000216106 USP17L21D6R901 530 aa9.26□□□□□ -0.93
HMGXB4-201ENST00000216106 NDUFA8P51970 172 aa9.26□□□□□ -0.93
HMGXB4-201ENST00000216106 PRR5LQ6MZQ0 368 aa9.26□□□□□ -0.93
HMGXB4-201ENST00000216106 CTR9Q6PD62 1173 aa9.26□□□□□ -0.93
HMGXB4-201ENST00000216106 GOLGB1Q14789 3259 aaKnown RBP9.26□□□□□ -0.93
HMGXB4-201ENST00000216106 PDS5AQ29RF7 1337 aaKnown RBP9.26□□□□□ -0.93
HMGXB4-201ENST00000216106 SLC4A8Q2Y0W8 1093 aa9.26□□□□□ -0.93
HMGXB4-201ENST00000216106 CERKQ8TCT0 537 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms