RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 SPATA31A3Q5VYP0 1347 aa17.35■□□□□ 0.37
EFNB1-201ENST00000204961 ZNF174Q15697 407 aa17.35■□□□□ 0.37
EFNB1-201ENST00000204961 TEX35Q5T0J7 233 aa17.35■□□□□ 0.37
EFNB1-201ENST00000204961 FAM182BQ5T319 152 aa17.35■□□□□ 0.37
EFNB1-201ENST00000204961 MNS1Q8NEH6 495 aa17.35■□□□□ 0.37
EFNB1-201ENST00000204961 EPB41L4AQ9HCS5 686 aaPredicted RBP17.35■□□□□ 0.37
EFNB1-201ENST00000204961 RIPOR2Q9Y4F9 1068 aa17.35■□□□□ 0.37
EFNB1-201ENST00000204961 A0A0U1RQJ8 604 aa17.35■□□□□ 0.37
EFNB1-201ENST00000204961 NMT2O60551 498 aa17.35■□□□□ 0.37
EFNB1-201ENST00000204961 PDE8BO95263 885 aa17.35■□□□□ 0.37
EFNB1-201ENST00000204961 CYP7A1P22680 504 aa17.35■□□□□ 0.37
EFNB1-201ENST00000204961 MTF1Q14872 753 aa17.35■□□□□ 0.37
EFNB1-201ENST00000204961 ARHGAP29Q52LW3 1261 aa17.35■□□□□ 0.37
EFNB1-201ENST00000204961 SLC51AQ86UW1 340 aa17.35■□□□□ 0.37
EFNB1-201ENST00000204961 ATRIPQ8WXE1 791 aa17.35■□□□□ 0.37
EFNB1-201ENST00000204961 ISCA1Q9BUE6 129 aa17.35■□□□□ 0.37
EFNB1-201ENST00000204961 CARD6Q9BX69 1037 aa17.35■□□□□ 0.37
EFNB1-201ENST00000204961 WDR17Q8IZU2 1322 aa17.35■□□□□ 0.37
EFNB1-201ENST00000204961 NLRP12P59046 1061 aa17.34■□□□□ 0.37
EFNB1-201ENST00000204961 DYNLL1P63167 89 aaKnown RBP17.34■□□□□ 0.37
EFNB1-201ENST00000204961 SAFBQ15424 915 aaKnown RBP eCLIP17.34■□□□□ 0.37
EFNB1-201ENST00000204961 UTP14CQ5TAP6 766 aaKnown RBP17.34■□□□□ 0.37
EFNB1-201ENST00000204961 SPATA5Q8NB90 893 aa17.34■□□□□ 0.37
EFNB1-201ENST00000204961 BLZF1Q9H2G9 400 aa17.34■□□□□ 0.37
EFNB1-201ENST00000204961 ERICH2A1L162 156 aa17.34■□□□□ 0.37
EFNB1-201ENST00000204961 AKAP17AQ02040 695 aaKnown RBP17.34■□□□□ 0.37
EFNB1-201ENST00000204961 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.34■□□□□ 0.37
EFNB1-201ENST00000204961 EPSTI1Q96J88 318 aa17.34■□□□□ 0.37
EFNB1-201ENST00000204961 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.34■□□□□ 0.37
EFNB1-201ENST00000204961 SALL1Q9NSC2 1324 aa17.34■□□□□ 0.37
EFNB1-201ENST00000204961 NRDCO43847 1150 aa17.34■□□□□ 0.37
EFNB1-201ENST00000204961 GNG11P61952 73 aa17.34■□□□□ 0.37
EFNB1-201ENST00000204961 DHX8Q14562 1220 aaKnown RBP17.34■□□□□ 0.37
EFNB1-201ENST00000204961 FAM47AQ5JRC9 791 aa17.34■□□□□ 0.37
EFNB1-201ENST00000204961 CCDC34Q96HJ3 373 aa17.34■□□□□ 0.37
EFNB1-201ENST00000204961 UBAC1Q9BSL1 405 aa17.34■□□□□ 0.37
EFNB1-201ENST00000204961 NFE2L3Q9Y4A8 694 aa17.34■□□□□ 0.37
EFNB1-201ENST00000204961 GTF2F1P35269 517 aaKnown RBP eCLIP17.33■□□□□ 0.37
EFNB1-201ENST00000204961 WTAPQ15007 396 aa17.33■□□□□ 0.37
EFNB1-201ENST00000204961 SLC39A14Q15043 492 aa17.33■□□□□ 0.37
EFNB1-201ENST00000204961 METTL16Q86W50 562 aaKnown RBP17.33■□□□□ 0.37
EFNB1-201ENST00000204961 PLCD3Q8N3E9 789 aa17.33■□□□□ 0.37
EFNB1-201ENST00000204961 RASSF8Q8NHQ8 419 aa17.33■□□□□ 0.37
EFNB1-201ENST00000204961 GTPBP4Q9BZE4 634 aaKnown RBP17.33■□□□□ 0.37
EFNB1-201ENST00000204961 PAXBP1Q9Y5B6 917 aa17.33■□□□□ 0.37
EFNB1-201ENST00000204961 C5P01031 1676 aa17.33■□□□□ 0.37
EFNB1-201ENST00000204961 UBN2Q6ZU65 1347 aa17.33■□□□□ 0.37
EFNB1-201ENST00000204961 SH2B2O14492 632 aaPredicted RBP17.33■□□□□ 0.36
EFNB1-201ENST00000204961 GIGYF2Q6Y7W6 1299 aaKnown RBP17.33■□□□□ 0.36
EFNB1-201ENST00000204961 SLAIN2Q9P270 581 aa17.33■□□□□ 0.36
EFNB1-201ENST00000204961 PCCAP05165 728 aaPredicted RBP17.32■□□□□ 0.36
EFNB1-201ENST00000204961 ZFYP08048 801 aaPredicted RBP17.32■□□□□ 0.36
EFNB1-201ENST00000204961 CCT6AP40227 531 aaKnown RBP17.32■□□□□ 0.36
EFNB1-201ENST00000204961 MAP3K12Q12852 859 aa17.32■□□□□ 0.36
EFNB1-201ENST00000204961 RTN1Q16799 776 aa17.32■□□□□ 0.36
EFNB1-201ENST00000204961 STRBPQ96SI9 672 aaKnown RBP17.32■□□□□ 0.36
EFNB1-201ENST00000204961 TFCP2L1Q9NZI6 479 aa17.32■□□□□ 0.36
EFNB1-201ENST00000204961 NIP7Q9Y221 180 aaKnown RBP eCLIP17.32■□□□□ 0.36
EFNB1-201ENST00000204961 V9GY48 417 aaPredicted RBP17.32■□□□□ 0.36
EFNB1-201ENST00000204961 FMR1Q06787 632 aaKnown RBP eCLIP17.32■□□□□ 0.36
EFNB1-201ENST00000204961 SUSD4Q5VX71 490 aa17.32■□□□□ 0.36
EFNB1-201ENST00000204961 ZNF335Q9H4Z2 1342 aaPredicted RBP17.32■□□□□ 0.36
EFNB1-201ENST00000204961 MED1Q15648 1581 aaPredicted RBP17.32■□□□□ 0.36
EFNB1-201ENST00000204961 SLU7O95391 586 aaKnown RBP17.32■□□□□ 0.36
EFNB1-201ENST00000204961 NCAPHQ15003 741 aa17.32■□□□□ 0.36
EFNB1-201ENST00000204961 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.32■□□□□ 0.36
EFNB1-201ENST00000204961 POLR3EQ9NVU0 708 aa17.32■□□□□ 0.36
EFNB1-201ENST00000204961 ERVV-2B6SEH9 535 aa17.31■□□□□ 0.36
EFNB1-201ENST00000204961 TULP1O00294 542 aaPredicted RBP17.31■□□□□ 0.36
EFNB1-201ENST00000204961 CMA1P23946 247 aa17.31■□□□□ 0.36
EFNB1-201ENST00000204961 GYS2P54840 703 aa17.31■□□□□ 0.36
EFNB1-201ENST00000204961 PDIA4P13667 645 aaKnown RBP17.31■□□□□ 0.36
EFNB1-201ENST00000204961 ATP6V1AP38606 617 aa17.31■□□□□ 0.36
EFNB1-201ENST00000204961 TRIM22Q8IYM9 498 aa17.31■□□□□ 0.36
EFNB1-201ENST00000204961 ANKRD7Q92527 254 aa17.31■□□□□ 0.36
EFNB1-201ENST00000204961 LY9Q9HBG7 655 aa17.31■□□□□ 0.36
EFNB1-201ENST00000204961 ZCCHC17Q9NP64 241 aaKnown RBP17.31■□□□□ 0.36
EFNB1-201ENST00000204961 BMP6P22004 513 aa17.31■□□□□ 0.36
EFNB1-201ENST00000204961 MYL5Q02045 173 aa17.31■□□□□ 0.36
EFNB1-201ENST00000204961 AGXT2Q9BYV1 514 aa17.31■□□□□ 0.36
EFNB1-201ENST00000204961 PUF60Q9UHX1 559 aaKnown RBP17.31■□□□□ 0.36
EFNB1-201ENST00000204961 MAP3K15Q6ZN16 1313 aa17.3■□□□□ 0.36
EFNB1-201ENST00000204961 CTIFO43310 598 aaKnown RBP17.3■□□□□ 0.36
EFNB1-201ENST00000204961 YEATS4O95619 227 aa17.3■□□□□ 0.36
EFNB1-201ENST00000204961 VEGFAP15692 232 aaPredicted RBP17.3■□□□□ 0.36
EFNB1-201ENST00000204961 EARS2Q5JPH6 523 aaKnown RBP17.3■□□□□ 0.36
EFNB1-201ENST00000204961 BRAPQ7Z569 592 aa17.3■□□□□ 0.36
EFNB1-201ENST00000204961 AFDNP55196 1824 aaKnown RBP17.3■□□□□ 0.36
EFNB1-201ENST00000204961 VWA3AA6NCI4 1184 aa17.3■□□□□ 0.36
EFNB1-201ENST00000204961 ADGRA1Q86SQ6 560 aa17.3■□□□□ 0.36
EFNB1-201ENST00000204961 ZMYM6O95789 1325 aa17.29■□□□□ 0.36
EFNB1-201ENST00000204961 FAM170AA1A519 330 aa17.29■□□□□ 0.36
EFNB1-201ENST00000204961 WNT7AO00755 349 aa17.29■□□□□ 0.36
EFNB1-201ENST00000204961 IGDCC4Q8TDY8 1250 aa17.29■□□□□ 0.36
EFNB1-201ENST00000204961 UBXN4Q92575 508 aa17.29■□□□□ 0.36
EFNB1-201ENST00000204961 FAM217BQ9NTX9 383 aaPredicted RBP17.29■□□□□ 0.36
EFNB1-201ENST00000204961 TEX33O43247 280 aa17.29■□□□□ 0.36
EFNB1-201ENST00000204961 CIAO1O76071 339 aa17.29■□□□□ 0.36
EFNB1-201ENST00000204961 JMYQ8N9B5 988 aa17.29■□□□□ 0.36
EFNB1-201ENST00000204961 RASGRP4Q8TDF6 673 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms