RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Iqcj-Schip1A0A088MLT8 559 aa17.41■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Schip1P0DPB4 484 aa17.41■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Kifap3P70188 793 aa17.41■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Mterf4Q8BVN4 346 aa17.41■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Stag1Q9D3E6 1258 aa17.41■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Kifc2O08672 792 aa17.41■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Ppp2r3dQ9Z176 491 aa17.41■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Zkscan16A2ALW2 728 aa17.41■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Spats2Q8K1N4 545 aaKnown RBP17.41■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Grk2Q99MK8 689 aa17.41■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Pdcd6ipQ9WU78 869 aaKnown RBP17.41■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Fam228aQ8CDW1 299 aa17.41■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Sorbs3Q9R1Z8 733 aa17.41■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Ankle2Q6P1H6 964 aa17.41■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Maip1Q8BHE8 291 aa17.41■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Nol11Q8BJW5 723 aaKnown RBP17.4■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Traf3ip3Q8C0G2 513 aa17.4■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Gm6588E9Q3K0 461 aa17.4■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Eme2Q56A04 373 aa17.4■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Pspc1Q8R326 523 aaKnown RBP17.4■□□□□ 0.38
Ubr3-201ENSMUST00000055758 NapaQ9DB05 295 aa17.4■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Krt18P05784 423 aa17.4■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Q3UJC8 639 aa17.4■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Slc51bQ80WK2 128 aa17.4■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Rabep2Q91WG2 554 aa17.4■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Rpl13P47963 211 aaKnown RBP17.4■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Pde1bQ01065 535 aa17.4■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Jarid2Q62315 1234 aa17.4■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Bfsp1A2AMT1 669 aa17.4■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Cetn3O35648 167 aa17.4■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Fen1P39749 378 aa17.4■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Tekt3Q6X6Z7 490 aa17.4■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Ccdc40Q8BI79 1192 aa17.4■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Klhl20Q8VCK5 604 aa17.4■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Mcmdc2E9Q956 681 aa17.4■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Akap17bA2A3V1 959 aa17.39■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Otud7bB2RUR8 840 aa17.39■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Grm8P47743 908 aa17.39■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Krt222Q8CCX5 294 aa17.39■□□□□ 0.38
Ubr3-201ENSMUST00000055758 BrapQ99MP8 591 aa17.39■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Kcnh3Q9WVJ0 1095 aa17.39■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Zbtb45Q52KG4 520 aa17.39■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Cacna2d2Q6PHS9 1154 aa17.39■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Znf76Q8BMU0 568 aa17.39■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Cdk5rap3Q99LM2 503 aa17.39■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Xpo4Q9ESJ0 1151 aa17.39■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Myo10F8VQB6 2062 aa17.39■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Ccdc141E9Q8Q6 1531 aa17.39■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Ncoa1P70365 1447 aa17.39■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Fam160b2Q80YR2 744 aa17.39■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Hdac9Q99N13 588 aa17.39■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Nsun2Q1HFZ0 757 aaKnown RBP17.39■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Fam83gQ5SWY7 812 aa17.39■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Parp10Q8CIE4 960 aa17.39■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Sall3Q62255 1320 aa17.39■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Gm6657A0A1B0GRJ3 277 aa17.39■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Aldh8a1Q8BH00 487 aa17.39■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Znf830Q8R1N0 363 aaKnown RBP17.39■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Zfp202Q8C879 641 aa17.38■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Gm1043A0A140LJC2 1431 aa17.38■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Fam133bQ9CVI2 245 aaKnown RBP17.38■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Efcc1Q9JJF6 558 aa17.38■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Gkap1Q9JMB0 366 aa17.38■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Ctnna1P26231 906 aaKnown RBP17.38■□□□□ 0.37
Ubr3-201ENSMUST00000055758 SdsQ8VBT2 327 aa17.38■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Osbpl1aQ91XL9 950 aa17.38■□□□□ 0.37
Ubr3-201ENSMUST00000055758 AU019823E9PUQ3 292 aa17.38■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Lrrc74aA0A1Y7VMD6 494 aa17.38■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Sept10Q8C650 452 aa17.38■□□□□ 0.37
Ubr3-201ENSMUST00000055758 9230110C19RikQ8CC70 267 aa17.38■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Taf12Q8VE65 161 aa17.38■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Pcdhb2Q91Y00 799 aa17.38■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Bach1P97302 739 aa17.37■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Ccdc28aQ8CEI3 192 aa17.37■□□□□ 0.37
Ubr3-201ENSMUST00000055758 1700013H16RikQ9DAC5 291 aa17.37■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Myh6Q02566 1938 aaKnown RBP17.37■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Nlrp14Q6B966 993 aa17.37■□□□□ 0.37
Ubr3-201ENSMUST00000055758 PdclQ9DBX2 301 aa17.37■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Jade1Q6ZPI0 834 aaKnown RBP17.37■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Pak1O88643 545 aa17.37■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Atp8b2P98199 1209 aa17.37■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Apol10bG3X9K7 334 aa17.37■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Flot1O08917 428 aa17.37■□□□□ 0.37
Ubr3-201ENSMUST00000055758 ByslO54825 436 aaKnown RBP17.37■□□□□ 0.37
Ubr3-201ENSMUST00000055758 PicalmQ7M6Y3 660 aaKnown RBP17.37■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Pex19Q8VCI5 299 aa17.37■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Gnl1P36916 607 aa17.37■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Rnf40Q3U319 1001 aa17.37■□□□□ 0.37
Ubr3-201ENSMUST00000055758 EmbP21995 330 aa17.36■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Ppp1r7Q3UM45 361 aa17.36■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Kiaa1024Q8K3V7 917 aa17.36■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Nip7Q9CXK8 180 aaKnown RBP17.36■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Slc52a2Q9D8F3 450 aa17.36■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Arhgef2Q60875 985 aa17.36■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Slc26a7Q8R2Z3 656 aa17.36■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Myh14Q6URW6 2000 aa17.36■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Hirip3Q8BLH7 601 aa17.36■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Gna11P21278 359 aa17.36■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Spata2Q8K004 515 aa17.36■□□□□ 0.37
Ubr3-201ENSMUST00000055758 Sept3Q9Z1S5 350 aa17.36■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms