RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Tc2nQ91XT6 489 aa17.18■□□□□ 0.34
Nup54-201ENSMUST00000038514 Rbm33Q9CXK9 1231 aaKnown RBP17.18■□□□□ 0.34
Nup54-201ENSMUST00000038514 Ugt1a6bK9J7B2 531 aa17.17■□□□□ 0.34
Nup54-201ENSMUST00000038514 Nek1P51954 1203 aa17.17■□□□□ 0.34
Nup54-201ENSMUST00000038514 Kcnj4P52189 445 aa17.17■□□□□ 0.34
Nup54-201ENSMUST00000038514 Mcm6P97311 821 aa17.17■□□□□ 0.34
Nup54-201ENSMUST00000038514 MpndQ3TV65 487 aa17.17■□□□□ 0.34
Nup54-201ENSMUST00000038514 Ugt1a6Q64435 531 aa17.17■□□□□ 0.34
Nup54-201ENSMUST00000038514 Ugt1a7cQ6ZQM8 531 aa17.17■□□□□ 0.34
Nup54-201ENSMUST00000038514 Ankk1Q8BZ25 745 aa17.17■□□□□ 0.34
Nup54-201ENSMUST00000038514 9230110C19RikQ8CC70 267 aa17.17■□□□□ 0.34
Nup54-201ENSMUST00000038514 Gigyf1Q99MR1 1044 aaKnown RBP17.17■□□□□ 0.34
Nup54-201ENSMUST00000038514 Ssc5dQ8BV57 1371 aa17.17■□□□□ 0.34
Nup54-201ENSMUST00000038514 Acad12D3Z7X0 555 aa17.17■□□□□ 0.34
Nup54-201ENSMUST00000038514 Ccdc191J3QQ27 883 aa17.17■□□□□ 0.34
Nup54-201ENSMUST00000038514 Tdo2P48776 406 aa17.17■□□□□ 0.34
Nup54-201ENSMUST00000038514 Ccdc174Q3U155 467 aa17.17■□□□□ 0.34
Nup54-201ENSMUST00000038514 Cyp7b1Q60991 507 aa17.17■□□□□ 0.34
Nup54-201ENSMUST00000038514 Gnl3lQ6PGG6 577 aaKnown RBP17.17■□□□□ 0.34
Nup54-201ENSMUST00000038514 Slc44a1Q6X893 653 aa17.17■□□□□ 0.34
Nup54-201ENSMUST00000038514 Kcnj14Q8JZN3 434 aa17.17■□□□□ 0.34
Nup54-201ENSMUST00000038514 Evc2Q8K1G2 1220 aa17.17■□□□□ 0.34
Nup54-201ENSMUST00000038514 Ces1dQ8VCT4 565 aa17.17■□□□□ 0.34
Nup54-201ENSMUST00000038514 AfdnQ9QZQ1 1820 aaKnown RBP17.17■□□□□ 0.34
Nup54-201ENSMUST00000038514 Fam170aQ66LM6 333 aa17.16■□□□□ 0.34
Nup54-201ENSMUST00000038514 Ncoa7Q6DFV7 943 aa17.16■□□□□ 0.34
Nup54-201ENSMUST00000038514 Enox1Q8BHR2 643 aaKnown RBP17.16■□□□□ 0.34
Nup54-201ENSMUST00000038514 Lmod1Q8BVA4 595 aa17.16■□□□□ 0.34
Nup54-201ENSMUST00000038514 Q8K2W9 541 aa17.16■□□□□ 0.34
Nup54-201ENSMUST00000038514 SsbP32067 415 aaKnown RBP17.16■□□□□ 0.34
Nup54-201ENSMUST00000038514 Gng11P61953 73 aa17.16■□□□□ 0.34
Nup54-201ENSMUST00000038514 Pla2g4fQ50L41 855 aa17.16■□□□□ 0.34
Nup54-201ENSMUST00000038514 Trim25Q61510 634 aaKnown RBP17.16■□□□□ 0.34
Nup54-201ENSMUST00000038514 Glis3Q6XP49 780 aa17.16■□□□□ 0.34
Nup54-201ENSMUST00000038514 Iqcb1Q8BP00 598 aa17.16■□□□□ 0.34
Nup54-201ENSMUST00000038514 Tspyl4Q8VD63 406 aa17.16■□□□□ 0.34
Nup54-201ENSMUST00000038514 Baiap2l1Q9DBJ3 514 aa17.16■□□□□ 0.34
Nup54-201ENSMUST00000038514 Suclg2Q9Z2I8 433 aa17.16■□□□□ 0.34
Nup54-201ENSMUST00000038514 Rsrc2A2RTL5 376 aaKnown RBP17.15■□□□□ 0.34
Nup54-201ENSMUST00000038514 Pde8bE9Q4S1 865 aa17.15■□□□□ 0.34
Nup54-201ENSMUST00000038514 Cops6O88545 324 aa17.15■□□□□ 0.34
Nup54-201ENSMUST00000038514 Smg7Q5RJH6 1138 aaKnown RBP17.15■□□□□ 0.34
Nup54-201ENSMUST00000038514 Hps6Q8BLY7 805 aa17.15■□□□□ 0.34
Nup54-201ENSMUST00000038514 Wasf1Q8R5H6 559 aa17.15■□□□□ 0.34
Nup54-201ENSMUST00000038514 Polr2dQ9D7M8 142 aaKnown RBP17.15■□□□□ 0.34
Nup54-201ENSMUST00000038514 Bin2D3Z6Q9 489 aa17.15■□□□□ 0.34
Nup54-201ENSMUST00000038514 Hspa4Q61316 841 aa17.15■□□□□ 0.34
Nup54-201ENSMUST00000038514 Ift122Q6NWV3 1182 aa17.15■□□□□ 0.34
Nup54-201ENSMUST00000038514 Rtn1Q8K0T0 780 aa17.15■□□□□ 0.34
Nup54-201ENSMUST00000038514 Hic2Q9JLZ6 619 aaKnown RBP17.15■□□□□ 0.34
Nup54-201ENSMUST00000038514 Akap11E9Q777 1895 aa17.14■□□□□ 0.33
Nup54-201ENSMUST00000038514 Adssl1P28650 457 aa17.14■□□□□ 0.33
Nup54-201ENSMUST00000038514 Rassf4Q8CB96 322 aa17.14■□□□□ 0.33
Nup54-201ENSMUST00000038514 Desi2Q9D291 194 aa17.14■□□□□ 0.33
Nup54-201ENSMUST00000038514 Cnpy3Q9DAU1 276 aa17.14■□□□□ 0.33
Nup54-201ENSMUST00000038514 Frmd7A2AD83 703 aa17.14■□□□□ 0.33
Nup54-201ENSMUST00000038514 NapbP28663 298 aa17.14■□□□□ 0.33
Nup54-201ENSMUST00000038514 Nme8Q715T0 586 aa17.14■□□□□ 0.33
Nup54-201ENSMUST00000038514 Ccdc39Q9D5Y1 937 aa17.14■□□□□ 0.33
Nup54-201ENSMUST00000038514 IcoslgQ9JHJ8 322 aa17.14■□□□□ 0.33
Nup54-201ENSMUST00000038514 Myh3P13541 1940 aa17.14■□□□□ 0.33
Nup54-201ENSMUST00000038514 Pola2P33611 600 aa17.13■□□□□ 0.33
Nup54-201ENSMUST00000038514 Anp32eP97822 260 aaKnown RBP17.13■□□□□ 0.33
Nup54-201ENSMUST00000038514 Paf1Q8K2T8 535 aa17.13■□□□□ 0.33
Nup54-201ENSMUST00000038514 Etnk1Q9D4V0 363 aa17.13■□□□□ 0.33
Nup54-201ENSMUST00000038514 Mroh6V9GX81 722 aa17.13■□□□□ 0.33
Nup54-201ENSMUST00000038514 Gm11983V9GXS8 105 aa17.13■□□□□ 0.33
Nup54-201ENSMUST00000038514 Ecm29Q6PDI5 1840 aa17.13■□□□□ 0.33
Nup54-201ENSMUST00000038514 Lcmt1A0A0U1RNF2 332 aa17.13■□□□□ 0.33
Nup54-201ENSMUST00000038514 NefhP19246 1090 aa17.13■□□□□ 0.33
Nup54-201ENSMUST00000038514 Rtel1Q0VGM9 1203 aa17.13■□□□□ 0.33
Nup54-201ENSMUST00000038514 Ccnl1Q52KE7 532 aaKnown RBP17.13■□□□□ 0.33
Nup54-201ENSMUST00000038514 Usp49Q6P9L4 685 aa17.13■□□□□ 0.33
Nup54-201ENSMUST00000038514 Pde5aQ8CG03 865 aa17.13■□□□□ 0.33
Nup54-201ENSMUST00000038514 BaatQ91X34 420 aa17.13■□□□□ 0.33
Nup54-201ENSMUST00000038514 Sdc2P43407 202 aa17.12■□□□□ 0.33
Nup54-201ENSMUST00000038514 Plbd2Q3TCN2 594 aa17.12■□□□□ 0.33
Nup54-201ENSMUST00000038514 Cnnm2Q3TWN3 875 aa17.12■□□□□ 0.33
Nup54-201ENSMUST00000038514 Pex1Q5BL07 1284 aa17.12■□□□□ 0.33
Nup54-201ENSMUST00000038514 Slc38a10Q5I012 1090 aa17.12■□□□□ 0.33
Nup54-201ENSMUST00000038514 Ovgp1Q62010 721 aa17.12■□□□□ 0.33
Nup54-201ENSMUST00000038514 Abtb2Q7TQI7 1024 aa17.12■□□□□ 0.33
Nup54-201ENSMUST00000038514 Anks1bQ8BIZ1 1259 aa17.12■□□□□ 0.33
Nup54-201ENSMUST00000038514 Larp6Q8BN59 492 aa17.12■□□□□ 0.33
Nup54-201ENSMUST00000038514 Rbm43Q99J64 343 aa17.12■□□□□ 0.33
Nup54-201ENSMUST00000038514 Krt23Q99PS0 422 aa17.12■□□□□ 0.33
Nup54-201ENSMUST00000038514 Pcdh10E9PXQ7 1057 aa17.11■□□□□ 0.33
Nup54-201ENSMUST00000038514 Capn2O08529 700 aa17.11■□□□□ 0.33
Nup54-201ENSMUST00000038514 Gabpb2P81069 414 aa17.11■□□□□ 0.33
Nup54-201ENSMUST00000038514 Ankrd40Q5SUE8 363 aa17.11■□□□□ 0.33
Nup54-201ENSMUST00000038514 DccP70211 1447 aa17.11■□□□□ 0.33
Nup54-201ENSMUST00000038514 Calcoco2A2A6M5 331 aa17.11■□□□□ 0.33
Nup54-201ENSMUST00000038514 Agtpbp1Q641K1 1218 aa17.11■□□□□ 0.33
Nup54-201ENSMUST00000038514 Csrnp2Q8BGQ2 534 aa17.11■□□□□ 0.33
Nup54-201ENSMUST00000038514 Slx1bQ8BX32 270 aa17.11■□□□□ 0.33
Nup54-201ENSMUST00000038514 Foxo4Q9WVH3 505 aa17.11■□□□□ 0.33
Nup54-201ENSMUST00000038514 Myh13B1AR69 1938 aa17.11■□□□□ 0.33
Nup54-201ENSMUST00000038514 Dnajc2P54103 621 aaKnown RBP17.1■□□□□ 0.33
Nup54-201ENSMUST00000038514 Nab2Q61127 525 aa17.1■□□□□ 0.33
Nup54-201ENSMUST00000038514 Nat10Q8K224 1024 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms