RNA–Protein interactions for RNA: ENST00000642102.1

CASC19-280, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,351 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-280ENST00000642102 SCUBE2Q9NQ36 999 aa13.97□□□□□ -0.17
CASC19-280ENST00000642102 ASTLQ6HA08 431 aaPredicted RBP13.96□□□□□ -0.18
CASC19-280ENST00000642102 ATMINO43313 823 aaPredicted RBP13.91□□□□□ -0.18
CASC19-280ENST00000642102 CDAN1Q8IWY9 1227 aa13.89□□□□□ -0.19
CASC19-280ENST00000642102 STAG3Q9UJ98 1225 aa13.86□□□□□ -0.19
CASC19-280ENST00000642102 MS4A3Q96HJ5 214 aa13.83□□□□□ -0.2
CASC19-280ENST00000642102 NPM1P06748 294 aaKnown RBP eCLIP13.8□□□□□ -0.2
CASC19-280ENST00000642102 ATN1P54259 1190 aaPredicted RBP13.7□□□□□ -0.22
CASC19-280ENST00000642102 POTEFA5A3E0 1075 aa13.64□□□□□ -0.23
CASC19-280ENST00000642102 MMRN1Q13201 1228 aa13.64□□□□□ -0.23
CASC19-280ENST00000642102 MNX1P50219 401 aaPredicted RBP13.63□□□□□ -0.23
CASC19-280ENST00000642102 SPNS2Q8IVW8 549 aa13.56□□□□□ -0.24
CASC19-280ENST00000642102 ST18O60284 1047 aa13.53□□□□□ -0.24
CASC19-280ENST00000642102 BMP2KQ9NSY1 1161 aaPredicted RBP13.53□□□□□ -0.24
CASC19-280ENST00000642102 SEC24BO95487 1268 aa13.52□□□□□ -0.25
CASC19-280ENST00000642102 TSPYL2Q9H2G4 693 aaPredicted RBP13.51□□□□□ -0.25
CASC19-280ENST00000642102 COLQQ9Y215 455 aaPredicted RBP13.47□□□□□ -0.25
CASC19-280ENST00000642102 SLAIN1Q8ND83 568 aa13.45□□□□□ -0.26
CASC19-280ENST00000642102 KIF12Q96FN5 646 aa13.45□□□□□ -0.26
CASC19-280ENST00000642102 CCDC61Q9Y6R9 512 aa13.45□□□□□ -0.26
CASC19-280ENST00000642102 TIE1P35590 1138 aa13.44□□□□□ -0.26
CASC19-280ENST00000642102 TRPC6Q9Y210 931 aa13.43□□□□□ -0.26
CASC19-280ENST00000642102 SPDYE4A6NLX3 237 aa13.35□□□□□ -0.27
CASC19-280ENST00000642102 TTLL13PA6NNM8 815 aa13.33□□□□□ -0.27
CASC19-280ENST00000642102 TMEM121BQ9BXQ6 578 aaPredicted RBP13.33□□□□□ -0.27
CASC19-280ENST00000642102 MAP3K13O43283 966 aa13.32□□□□□ -0.28
CASC19-280ENST00000642102 IER5LQ5T953 404 aa13.32□□□□□ -0.28
CASC19-280ENST00000642102 TRIM35Q9UPQ4 493 aa13.26□□□□□ -0.29
CASC19-280ENST00000642102 MARVELD3Q96A59 401 aa13.21□□□□□ -0.29
CASC19-280ENST00000642102 SNPHO15079 494 aa13.2□□□□□ -0.3
CASC19-280ENST00000642102 PLCG2P16885 1265 aa13.16□□□□□ -0.3
CASC19-280ENST00000642102 CSRNP3Q8WYN3 585 aa13.13□□□□□ -0.31
CASC19-280ENST00000642102 SGIP1Q9BQI5 828 aa13.08□□□□□ -0.31
CASC19-280ENST00000642102 RASEFQ8IZ41 740 aa13.07□□□□□ -0.32
CASC19-280ENST00000642102 PCDHB13Q9Y5F0 798 aa13.07□□□□□ -0.32
CASC19-280ENST00000642102 EMP3P54852 163 aa13.05□□□□□ -0.32
CASC19-280ENST00000642102 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.05□□□□□ -0.32
CASC19-280ENST00000642102 KRTAP3-3Q9BYR6 98 aa13.04□□□□□ -0.32
CASC19-280ENST00000642102 KRTAP3-2Q9BYR7 98 aa13.04□□□□□ -0.32
CASC19-280ENST00000642102 IRX5P78411 483 aaPredicted RBP13.01□□□□□ -0.33
CASC19-280ENST00000642102 TMEM106CQ9BVX2 250 aa13.01□□□□□ -0.33
CASC19-280ENST00000642102 PLEKHG5O94827 1062 aa13□□□□□ -0.33
CASC19-280ENST00000642102 EHMT2Q96KQ7 1210 aa13□□□□□ -0.33
CASC19-280ENST00000642102 HS3ST6Q96QI5 342 aa12.97□□□□□ -0.33
CASC19-280ENST00000642102 OCEL1Q9H607 264 aa12.95□□□□□ -0.34
CASC19-280ENST00000642102 FAM205CA6NFA0 338 aa12.94□□□□□ -0.34
CASC19-280ENST00000642102 IFNL1Q8IU54 200 aa12.94□□□□□ -0.34
CASC19-280ENST00000642102 POTEB3A0JP26 581 aa12.93□□□□□ -0.34
CASC19-280ENST00000642102 POTEBQ6S5H4 581 aa12.93□□□□□ -0.34
CASC19-280ENST00000642102 MIER1Q8N108 512 aa12.9□□□□□ -0.34
CASC19-280ENST00000642102 RNF166Q96A37 237 aaPredicted RBP12.81□□□□□ -0.36
CASC19-280ENST00000642102 C3orf67Q6ZVT6 689 aa12.81□□□□□ -0.36
CASC19-280ENST00000642102 PROM2Q8N271 834 aa12.8□□□□□ -0.36
CASC19-280ENST00000642102 L3MBTL3Q96JM7 780 aaPredicted RBP12.69□□□□□ -0.38
CASC19-280ENST00000642102 NUBP1P53384 320 aa12.69□□□□□ -0.38
CASC19-280ENST00000642102 PLCD3Q8N3E9 789 aa12.68□□□□□ -0.38
CASC19-280ENST00000642102 FAM212AQ96EL1 285 aa12.68□□□□□ -0.38
CASC19-280ENST00000642102 MYT1LQ9UL68 1186 aa12.67□□□□□ -0.38
CASC19-280ENST00000642102 ZBTB47Q9UFB7 747 aaPredicted RBP12.65□□□□□ -0.38
CASC19-280ENST00000642102 PDCD7Q8N8D1 485 aaKnown RBP12.64□□□□□ -0.39
CASC19-280ENST00000642102 ERBB3P21860 1342 aa12.59□□□□□ -0.39
CASC19-280ENST00000642102 HOXB1P14653 301 aaPredicted RBP12.56□□□□□ -0.4
CASC19-280ENST00000642102 MKRN3Q13064 507 aaKnown RBP12.55□□□□□ -0.4
CASC19-280ENST00000642102 ZNF710Q8N1W2 664 aa12.55□□□□□ -0.4
CASC19-280ENST00000642102 GOLGA2Q08379 1002 aa12.53□□□□□ -0.4
CASC19-280ENST00000642102 PCDHB8Q9UN66 801 aa12.53□□□□□ -0.4
CASC19-280ENST00000642102 HOXB3P14651 431 aaPredicted RBP12.52□□□□□ -0.41
CASC19-280ENST00000642102 PYGBP11216 843 aa12.5□□□□□ -0.41
CASC19-280ENST00000642102 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.49□□□□□ -0.417e-8■□□□□ 10.2
CASC19-280ENST00000642102 PTGER2P43116 358 aa12.47□□□□□ -0.41
CASC19-280ENST00000642102 VARS2Q5ST30 1063 aaKnown RBP12.45□□□□□ -0.42
CASC19-280ENST00000642102 DCAF8Q5TAQ9 597 aa12.44□□□□□ -0.42
CASC19-280ENST00000642102 DOK7Q18PE1 504 aa12.43□□□□□ -0.42
CASC19-280ENST00000642102 ZNF687Q8N1G0 1237 aa12.39□□□□□ -0.43
CASC19-280ENST00000642102 G3V3G9 751 aa12.38□□□□□ -0.43
CASC19-280ENST00000642102 RIMBP2O15034 1052 aa12.37□□□□□ -0.43
CASC19-280ENST00000642102 BOLA1Q9Y3E2 137 aa12.33□□□□□ -0.44
CASC19-280ENST00000642102 DPY19L2Q6NUT2 758 aa12.32□□□□□ -0.44
CASC19-280ENST00000642102 ZNF467Q7Z7K2 595 aaPredicted RBP12.32□□□□□ -0.44
CASC19-280ENST00000642102 PLA2G2EQ9NZK7 142 aa12.32□□□□□ -0.44
CASC19-280ENST00000642102 ANKRD13DQ6ZTN6 518 aa12.3□□□□□ -0.44
CASC19-280ENST00000642102 ILDR1Q86SU0 546 aaPredicted RBP12.3□□□□□ -0.44
CASC19-280ENST00000642102 PSEN1P49768 467 aa12.24□□□□□ -0.45
CASC19-280ENST00000642102 ZSWIM6Q9HCJ5 1215 aa12.23□□□□□ -0.45
CASC19-280ENST00000642102 HCSTQ9UBK5 93 aa12.16□□□□□ -0.46
CASC19-280ENST00000642102 LSM11P83369 360 aaKnown RBP eCLIP12.14□□□□□ -0.47
CASC19-280ENST00000642102 GPR153Q6NV75 609 aa12.14□□□□□ -0.47
CASC19-280ENST00000642102 GSE1Q14687 1217 aa12.1□□□□□ -0.47
CASC19-280ENST00000642102 CABP2Q9NPB3 220 aa12.1□□□□□ -0.47
CASC19-280ENST00000642102 CHRM1P11229 460 aaPredicted RBP12.08□□□□□ -0.48
CASC19-280ENST00000642102 PDAP1Q13442 181 aaKnown RBP12.07□□□□□ -0.48
CASC19-280ENST00000642102 ZNF316A6NFI3 1004 aaPredicted RBP12.03□□□□□ -0.48
CASC19-280ENST00000642102 ARSIQ5FYB1 569 aa12.03□□□□□ -0.48
CASC19-280ENST00000642102 TMEM92Q6UXU6 159 aa11.98□□□□□ -0.49
CASC19-280ENST00000642102 IRX2Q9BZI1 471 aaPredicted RBP11.98□□□□□ -0.49
CASC19-280ENST00000642102 PBX2P40425 430 aa11.96□□□□□ -0.49
CASC19-280ENST00000642102 MICALL2Q8IY33 904 aa11.92□□□□□ -0.5
CASC19-280ENST00000642102 KHSRPQ92945 711 aaKnown RBP eCLIP11.91□□□□□ -0.51e-6■□□□□ 10.6
CASC19-280ENST00000642102 RGS20O76081 388 aa11.9□□□□□ -0.5
CASC19-280ENST00000642102 FKBP8Q14318 412 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms