RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 GSE1Q14687 1217 aa13.79□□□□□ -0.2
SCARB2-224ENST00000640880 NUBP1P53384 320 aa13.7□□□□□ -0.22
SCARB2-224ENST00000640880 NKX1-1Q15270 411 aaPredicted RBP13.7□□□□□ -0.22
SCARB2-224ENST00000640880 RIOK3O14730 519 aaKnown RBP13.69□□□□□ -0.22
SCARB2-224ENST00000640880 DCAF8Q5TAQ9 597 aa13.67□□□□□ -0.22
SCARB2-224ENST00000640880 POTEHQ6S545 545 aa13.67□□□□□ -0.22
SCARB2-224ENST00000640880 GTPBP6O43824 516 aaPredicted RBP13.64□□□□□ -0.23
SCARB2-224ENST00000640880 STK25O00506 426 aa13.61□□□□□ -0.23
SCARB2-224ENST00000640880 VGFO15240 615 aaPredicted RBP13.58□□□□□ -0.24
SCARB2-224ENST00000640880 FAM212AQ96EL1 285 aa13.58□□□□□ -0.24
SCARB2-224ENST00000640880 RBM42Q9BTD8 480 aaKnown RBP13.58□□□□□ -0.24
SCARB2-224ENST00000640880 SPDYE1Q8NFV5 336 aaPredicted RBP13.53□□□□□ -0.24
SCARB2-224ENST00000640880 CREBZFQ9NS37 354 aa13.49□□□□□ -0.25
SCARB2-224ENST00000640880 STK24Q9Y6E0 443 aa13.49□□□□□ -0.25
SCARB2-224ENST00000640880 CHRM1P11229 460 aaPredicted RBP13.48□□□□□ -0.25
SCARB2-224ENST00000640880 BCL11BQ9C0K0 894 aaPredicted RBP13.48□□□□□ -0.25
SCARB2-224ENST00000640880 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.46□□□□□ -0.25
SCARB2-224ENST00000640880 MNX1P50219 401 aaPredicted RBP13.46□□□□□ -0.25
SCARB2-224ENST00000640880 ZFP91Q96JP5 570 aaPredicted RBP13.46□□□□□ -0.25
SCARB2-224ENST00000640880 RYDENQ9NUL5 291 aaKnown RBP13.46□□□□□ -0.25
SCARB2-224ENST00000640880 CLEC11AQ9Y240 323 aa13.46□□□□□ -0.25
SCARB2-224ENST00000640880 RASEFQ8IZ41 740 aa13.45□□□□□ -0.26
SCARB2-224ENST00000640880 SGIP1Q9BQI5 828 aa13.45□□□□□ -0.26
SCARB2-224ENST00000640880 PRR29P0C7W0 189 aa13.44□□□□□ -0.26
SCARB2-224ENST00000640880 TIMELESSQ9UNS1 1208 aa13.41□□□□□ -0.26
SCARB2-224ENST00000640880 TULP1O00294 542 aaPredicted RBP13.4□□□□□ -0.26
SCARB2-224ENST00000640880 AKT1S1Q96B36 256 aa13.39□□□□□ -0.27
SCARB2-224ENST00000640880 PYGBP11216 843 aa13.38□□□□□ -0.27
SCARB2-224ENST00000640880 GTF3C3Q9Y5Q9 886 aa13.37□□□□□ -0.27
SCARB2-224ENST00000640880 P3H3Q8IVL6 736 aa13.35□□□□□ -0.27
SCARB2-224ENST00000640880 CHRDL2Q6WN34 429 aa13.3□□□□□ -0.28
SCARB2-224ENST00000640880 REM2Q8IYK8 340 aaPredicted RBP13.29□□□□□ -0.28
SCARB2-224ENST00000640880 TMEM132AQ24JP5 1023 aa13.26□□□□□ -0.29
SCARB2-224ENST00000640880 WDR70Q9NW82 654 aa13.25□□□□□ -0.29
SCARB2-224ENST00000640880 KCNV2Q8TDN2 545 aa13.24□□□□□ -0.29
SCARB2-224ENST00000640880 CADPS2Q86UW7 1296 aa13.23□□□□□ -0.29
SCARB2-224ENST00000640880 NISCHQ9Y2I1 1504 aa13.22□□□□□ -0.29
SCARB2-224ENST00000640880 LMOD2Q6P5Q4 547 aa13.2□□□□□ -0.3
SCARB2-224ENST00000640880 ERICH6Q7L0X2 663 aa13.2□□□□□ -0.3
SCARB2-224ENST00000640880 ZNF467Q7Z7K2 595 aaPredicted RBP13.19□□□□□ -0.3
SCARB2-224ENST00000640880 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.16□□□□□ -0.3
SCARB2-224ENST00000640880 PDAP1Q13442 181 aaKnown RBP13.14□□□□□ -0.31
SCARB2-224ENST00000640880 TSPYL2Q9H2G4 693 aaPredicted RBP13.14□□□□□ -0.31
SCARB2-224ENST00000640880 PITPNM1O00562 1244 aa13.13□□□□□ -0.31
SCARB2-224ENST00000640880 PCDHB8Q9UN66 801 aa13.09□□□□□ -0.31
SCARB2-224ENST00000640880 PCDHB13Q9Y5F0 798 aa13.09□□□□□ -0.31
SCARB2-224ENST00000640880 MFRPQ9BY79 579 aa13.07□□□□□ -0.32
SCARB2-224ENST00000640880 PSEN1P49768 467 aa13.04□□□□□ -0.32
SCARB2-224ENST00000640880 CHADLQ6NUI6 762 aa13.04□□□□□ -0.32
SCARB2-224ENST00000640880 C14orf37Q86TY3 774 aa13.03□□□□□ -0.32
SCARB2-224ENST00000640880 ARHGEF1Q92888 912 aaKnown RBP13.01□□□□□ -0.33
SCARB2-224ENST00000640880 BRPF1P55201 1214 aaPredicted RBP13□□□□□ -0.33
SCARB2-224ENST00000640880 ARXQ96QS3 562 aa13□□□□□ -0.33
SCARB2-224ENST00000640880 ZNF579Q8NAF0 562 aaKnown RBP12.99□□□□□ -0.33
SCARB2-224ENST00000640880 FARP1Q9Y4F1 1045 aaPredicted RBP12.98□□□□□ -0.33
SCARB2-224ENST00000640880 PPP1R37O75864 691 aa12.97□□□□□ -0.33
SCARB2-224ENST00000640880 E2F4Q16254 413 aa12.97□□□□□ -0.33
SCARB2-224ENST00000640880 PIP4P2Q8N4L2 257 aa12.97□□□□□ -0.33
SCARB2-224ENST00000640880 ZC3H15Q8WU90 426 aaKnown RBP12.97□□□□□ -0.33
SCARB2-224ENST00000640880 CCDC61Q9Y6R9 512 aa12.96□□□□□ -0.33
SCARB2-224ENST00000640880 SEMA3EO15041 775 aa12.92□□□□□ -0.34
SCARB2-224ENST00000640880 NLRP6P59044 892 aa12.92□□□□□ -0.34
SCARB2-224ENST00000640880 FBXO22Q8NEZ5 403 aa12.92□□□□□ -0.34
SCARB2-224ENST00000640880 TESPA1A2RU30 521 aaPredicted RBP12.91□□□□□ -0.34
SCARB2-224ENST00000640880 NEUROD2Q15784 382 aa12.91□□□□□ -0.34
SCARB2-224ENST00000640880 EFCAB3Q8N7B9 438 aa12.91□□□□□ -0.34
SCARB2-224ENST00000640880 SLC24A3Q9HC58 644 aa12.89□□□□□ -0.35
SCARB2-224ENST00000640880 CABP2Q9NPB3 220 aa12.89□□□□□ -0.35
SCARB2-224ENST00000640880 PHF8Q9UPP1 1060 aa12.89□□□□□ -0.35
SCARB2-224ENST00000640880 SOX12O15370 315 aa12.87□□□□□ -0.35
SCARB2-224ENST00000640880 IFNL1Q8IU54 200 aa12.87□□□□□ -0.35
SCARB2-224ENST00000640880 FXR2P51116 673 aaKnown RBP eCLIP12.85□□□□□ -0.35
SCARB2-224ENST00000640880 HAX1O00165 279 aa12.82□□□□□ -0.36
SCARB2-224ENST00000640880 NCKAP5LQ9HCH0 1330 aa12.82□□□□□ -0.36
SCARB2-224ENST00000640880 PAK3O75914 559 aaPredicted RBP12.81□□□□□ -0.36
SCARB2-224ENST00000640880 PRKAR2AP13861 404 aaKnown RBP12.81□□□□□ -0.36
SCARB2-224ENST00000640880 MAP3K13O43283 966 aa12.8□□□□□ -0.36
SCARB2-224ENST00000640880 LARP6Q9BRS8 491 aaKnown RBP12.8□□□□□ -0.36
SCARB2-224ENST00000640880 SMYD5Q6GMV2 418 aa12.79□□□□□ -0.36
SCARB2-224ENST00000640880 SP7Q8TDD2 431 aaPredicted RBP12.79□□□□□ -0.36
SCARB2-224ENST00000640880 HOMEZQ8IX15 550 aa12.78□□□□□ -0.36
SCARB2-224ENST00000640880 ZMYND10O75800 440 aa12.77□□□□□ -0.37
SCARB2-224ENST00000640880 PDE4AP27815 886 aa12.77□□□□□ -0.37
SCARB2-224ENST00000640880 KIF12Q96FN5 646 aa12.77□□□□□ -0.37
SCARB2-224ENST00000640880 MFSD10Q14728 455 aa12.75□□□□□ -0.37
SCARB2-224ENST00000640880 DDX27Q96GQ7 796 aaKnown RBP12.72□□□□□ -0.37
SCARB2-224ENST00000640880 CRISPLD2Q9H0B8 497 aa12.72□□□□□ -0.37
SCARB2-224ENST00000640880 MS4A4AQ96JQ5 239 aa12.71□□□□□ -0.37
SCARB2-224ENST00000640880 DAXXQ9UER7 740 aaPredicted RBP12.71□□□□□ -0.37
SCARB2-224ENST00000640880 ARIH1Q9Y4X5 557 aaPredicted RBP12.7□□□□□ -0.38
SCARB2-224ENST00000640880 BARGINQ6ZT62 677 aa12.69□□□□□ -0.38
SCARB2-224ENST00000640880 SUPT5HO00267 1087 aaKnown RBP12.66□□□□□ -0.38
SCARB2-224ENST00000640880 CAMK2BQ13554 666 aa12.65□□□□□ -0.38
SCARB2-224ENST00000640880 GOLGA2Q08379 1002 aa12.63□□□□□ -0.39
SCARB2-224ENST00000640880 RBM26Q5T8P6 1007 aaKnown RBP12.61□□□□□ -0.39
SCARB2-224ENST00000640880 GPIHBP1Q8IV16 184 aa12.61□□□□□ -0.39
SCARB2-224ENST00000640880 AK7Q96M32 723 aa12.61□□□□□ -0.39
SCARB2-224ENST00000640880 MLLT3P42568 568 aaPredicted RBP12.59□□□□□ -0.39
SCARB2-224ENST00000640880 GPBP1L1Q9HC44 474 aaPredicted RBP12.59□□□□□ -0.39
SCARB2-224ENST00000640880 KRI1Q8N9T8 703 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms