RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 FAM212AQ96EL1 285 aa15.15■□□□□ 0.02
CCDC7-216ENST00000640058 CCDC61Q9Y6R9 512 aa15.14■□□□□ 0.01
CCDC7-216ENST00000640058 DCAF8Q5TAQ9 597 aa15.12■□□□□ 0.01
CCDC7-216ENST00000640058 SPOCK2Q92563 424 aa15.12■□□□□ 0.01
CCDC7-216ENST00000640058 GALR2O43603 387 aaPredicted RBP15.06■□□□□ 0
CCDC7-216ENST00000640058 CLCN6P51797 869 aa15.02■□□□□ -0
CCDC7-216ENST00000640058 MS4A3Q96HJ5 214 aa15.02■□□□□ -0
CCDC7-216ENST00000640058 KIF12Q96FN5 646 aa15.01□□□□□ -0.01
CCDC7-216ENST00000640058 CIZ1Q9ULV3 898 aaPredicted RBP15□□□□□ -0.01
CCDC7-216ENST00000640058 MAP3K13O43283 966 aa14.99□□□□□ -0.01
CCDC7-216ENST00000640058 GSE1Q14687 1217 aa14.99□□□□□ -0.01
CCDC7-216ENST00000640058 PYGBP11216 843 aa14.98□□□□□ -0.01
CCDC7-216ENST00000640058 DCBLD2Q96PD2 775 aa14.93□□□□□ -0.02
CCDC7-216ENST00000640058 PCDHB13Q9Y5F0 798 aa14.92□□□□□ -0.02
CCDC7-216ENST00000640058 POTEIP0CG38 1075 aa14.9□□□□□ -0.02
CCDC7-216ENST00000640058 TRPC6Q9Y210 931 aa14.87□□□□□ -0.03
CCDC7-216ENST00000640058 IFNL1Q8IU54 200 aa14.85□□□□□ -0.03
CCDC7-216ENST00000640058 SGIP1Q9BQI5 828 aa14.82□□□□□ -0.04
CCDC7-216ENST00000640058 PCDHB8Q9UN66 801 aa14.81□□□□□ -0.04
CCDC7-216ENST00000640058 CHRM1P11229 460 aaPredicted RBP14.76□□□□□ -0.05
CCDC7-216ENST00000640058 BMP2KQ9NSY1 1161 aaPredicted RBP14.76□□□□□ -0.05
CCDC7-216ENST00000640058 ATMINO43313 823 aaPredicted RBP14.74□□□□□ -0.05
CCDC7-216ENST00000640058 TIE1P35590 1138 aa14.72□□□□□ -0.05
CCDC7-216ENST00000640058 ASTLQ6HA08 431 aaPredicted RBP14.72□□□□□ -0.05
CCDC7-216ENST00000640058 PELP1Q8IZL8 1130 aaKnown RBP14.72□□□□□ -0.05
CCDC7-216ENST00000640058 ATN1P54259 1190 aaPredicted RBP14.71□□□□□ -0.05
CCDC7-216ENST00000640058 ZNF467Q7Z7K2 595 aaPredicted RBP14.7□□□□□ -0.06
CCDC7-216ENST00000640058 TRIM41Q8WV44 630 aa14.7□□□□□ -0.06
CCDC7-216ENST00000640058 TTLL13PA6NNM8 815 aa14.69□□□□□ -0.06
CCDC7-216ENST00000640058 TMEM106CQ9BVX2 250 aa14.68□□□□□ -0.06
CCDC7-216ENST00000640058 ECM2O94769 699 aaPredicted RBP14.64□□□□□ -0.07
CCDC7-216ENST00000640058 PKD2Q13563 968 aa14.64□□□□□ -0.07
CCDC7-216ENST00000640058 TRIM35Q9UPQ4 493 aa14.61□□□□□ -0.07
CCDC7-216ENST00000640058 PSEN1P49768 467 aa14.6□□□□□ -0.07
CCDC7-216ENST00000640058 RNF25Q96BH1 459 aaPredicted RBP14.6□□□□□ -0.07
CCDC7-216ENST00000640058 METRNQ9UJH8 293 aa14.58□□□□□ -0.08
CCDC7-216ENST00000640058 PDAP1Q13442 181 aaKnown RBP14.57□□□□□ -0.08
CCDC7-216ENST00000640058 SLC39A7Q92504 469 aa14.57□□□□□ -0.08
CCDC7-216ENST00000640058 RIOK3O14730 519 aaKnown RBP14.55□□□□□ -0.08
CCDC7-216ENST00000640058 C7P10643 843 aa14.52□□□□□ -0.09
CCDC7-216ENST00000640058 RGL2O15211 777 aa14.51□□□□□ -0.09
CCDC7-216ENST00000640058 LHX8Q68G74 356 aa14.49□□□□□ -0.09
CCDC7-216ENST00000640058 GOLGA2Q08379 1002 aa14.46□□□□□ -0.09
CCDC7-216ENST00000640058 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.45□□□□□ -0.1
CCDC7-216ENST00000640058 VGFO15240 615 aaPredicted RBP14.45□□□□□ -0.1
CCDC7-216ENST00000640058 SEC24BO95487 1268 aa14.45□□□□□ -0.1
CCDC7-216ENST00000640058 ZFP91Q96JP5 570 aaPredicted RBP14.45□□□□□ -0.1
CCDC7-216ENST00000640058 CABP2Q9NPB3 220 aa14.45□□□□□ -0.1
CCDC7-216ENST00000640058 POTEFA5A3E0 1075 aa14.44□□□□□ -0.1
CCDC7-216ENST00000640058 COLQQ9Y215 455 aaPredicted RBP14.44□□□□□ -0.1
CCDC7-216ENST00000640058 POTEB2H3BUK9 544 aa14.43□□□□□ -0.1
CCDC7-216ENST00000640058 IER5LQ5T953 404 aa14.43□□□□□ -0.1
CCDC7-216ENST00000640058 MKRN3Q13064 507 aaKnown RBP14.41□□□□□ -0.1
CCDC7-216ENST00000640058 PLCG2P16885 1265 aa14.37□□□□□ -0.11
CCDC7-216ENST00000640058 IRX5P78411 483 aaPredicted RBP14.36□□□□□ -0.11
CCDC7-216ENST00000640058 TAOK2Q9UL54 1235 aa14.36□□□□□ -0.11
CCDC7-216ENST00000640058 BCL11BQ9C0K0 894 aaPredicted RBP14.34□□□□□ -0.11
CCDC7-216ENST00000640058 STK25O00506 426 aa14.33□□□□□ -0.12
CCDC7-216ENST00000640058 EFCAB3Q8N7B9 438 aa14.33□□□□□ -0.12
CCDC7-216ENST00000640058 STK24Q9Y6E0 443 aa14.33□□□□□ -0.12
CCDC7-216ENST00000640058 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.32□□□□□ -0.12
CCDC7-216ENST00000640058 POTEJP0CG39 1038 aa14.31□□□□□ -0.12
CCDC7-216ENST00000640058 OCEL1Q9H607 264 aa14.31□□□□□ -0.12
CCDC7-216ENST00000640058 PDCD7Q8N8D1 485 aaKnown RBP14.25□□□□□ -0.13
CCDC7-216ENST00000640058 DCAF8L2P0C7V8 631 aa14.24□□□□□ -0.13
CCDC7-216ENST00000640058 OTUD5Q96G74 571 aa14.24□□□□□ -0.13
CCDC7-216ENST00000640058 RTN4Q9NQC3 1192 aaKnown RBP14.24□□□□□ -0.13
CCDC7-216ENST00000640058 AMER1Q5JTC6 1135 aaPredicted RBP14.23□□□□□ -0.13
CCDC7-216ENST00000640058 DPY19L2Q6NUT2 758 aa14.2□□□□□ -0.14
CCDC7-216ENST00000640058 CHGAP10645 457 aaKnown RBP14.19□□□□□ -0.14
CCDC7-216ENST00000640058 PHF8Q9UPP1 1060 aa14.19□□□□□ -0.14
CCDC7-216ENST00000640058 SCUBE2Q9NQ36 999 aa14.18□□□□□ -0.14
CCDC7-216ENST00000640058 MAMSTRQ6ZN01 415 aa14.17□□□□□ -0.14
CCDC7-216ENST00000640058 ILDR1Q86SU0 546 aaPredicted RBP14.17□□□□□ -0.14
CCDC7-216ENST00000640058 SOX12O15370 315 aa14.16□□□□□ -0.14
CCDC7-216ENST00000640058 HS6ST3Q8IZP7 471 aa14.14□□□□□ -0.15
CCDC7-216ENST00000640058 MS4A4AQ96JQ5 239 aa14.11□□□□□ -0.15
CCDC7-216ENST00000640058 L3MBTL3Q96JM7 780 aaPredicted RBP14.1□□□□□ -0.15
CCDC7-216ENST00000640058 MFRPQ9BY79 579 aa14.1□□□□□ -0.15
CCDC7-216ENST00000640058 NLRP6P59044 892 aa14.08□□□□□ -0.16
CCDC7-216ENST00000640058 G3V3G9 751 aa14.07□□□□□ -0.16
CCDC7-216ENST00000640058 FBXO22Q8NEZ5 403 aa14.07□□□□□ -0.16
CCDC7-216ENST00000640058 BOLA1Q9Y3E2 137 aa14.06□□□□□ -0.16
CCDC7-216ENST00000640058 C3orf67Q6ZVT6 689 aa14.04□□□□□ -0.16
CCDC7-216ENST00000640058 SLAIN1Q8ND83 568 aa14.03□□□□□ -0.16
CCDC7-216ENST00000640058 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.03□□□□□ -0.16
CCDC7-216ENST00000640058 NKX1-1Q15270 411 aaPredicted RBP13.99□□□□□ -0.17
CCDC7-216ENST00000640058 MICALL2Q8IY33 904 aa13.97□□□□□ -0.17
CCDC7-216ENST00000640058 TMEM121BQ9BXQ6 578 aaPredicted RBP13.93□□□□□ -0.18
CCDC7-216ENST00000640058 PPP1R37O75864 691 aa13.92□□□□□ -0.18
CCDC7-216ENST00000640058 DNAJC5Q9H3Z4 198 aa13.91□□□□□ -0.18
CCDC7-216ENST00000640058 TMEM92Q6UXU6 159 aa13.84□□□□□ -0.19
CCDC7-216ENST00000640058 FAM163AQ96GL9 167 aaPredicted RBP13.84□□□□□ -0.19
CCDC7-216ENST00000640058 GTPBP6O43824 516 aaPredicted RBP13.8□□□□□ -0.2
CCDC7-216ENST00000640058 RYDENQ9NUL5 291 aaKnown RBP13.79□□□□□ -0.2
CCDC7-216ENST00000640058 BBXQ8WY36 941 aaPredicted RBP13.76□□□□□ -0.21
CCDC7-216ENST00000640058 LCE2DQ5TA82 110 aaPredicted RBP13.74□□□□□ -0.21
CCDC7-216ENST00000640058 SNPHO15079 494 aa13.73□□□□□ -0.21
CCDC7-216ENST00000640058 C2orf72A6NCS6 295 aa13.7□□□□□ -0.22
CCDC7-216ENST00000640058 ST18O60284 1047 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms