RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 RASEFQ8IZ41 740 aa17.12■□□□□ 0.33
RFC1-217ENST00000639695 ASTLQ6HA08 431 aaPredicted RBP17.07■□□□□ 0.32
RFC1-217ENST00000639695 KIF12Q96FN5 646 aa17.07■□□□□ 0.32
RFC1-217ENST00000639695 ATMINO43313 823 aaPredicted RBP17.06■□□□□ 0.32
RFC1-217ENST00000639695 PLEKHG5O94827 1062 aa17.03■□□□□ 0.32
RFC1-217ENST00000639695 PLCD3Q8N3E9 789 aa17.03■□□□□ 0.32
RFC1-217ENST00000639695 OTUD5Q96G74 571 aa17.03■□□□□ 0.32
RFC1-217ENST00000639695 TRPC6Q9Y210 931 aa17.02■□□□□ 0.32
RFC1-217ENST00000639695 MAP3K13O43283 966 aa16.98■□□□□ 0.31
RFC1-217ENST00000639695 METRNQ9UJH8 293 aa16.97■□□□□ 0.31
RFC1-217ENST00000639695 ATN1P54259 1190 aaPredicted RBP16.95■□□□□ 0.3
RFC1-217ENST00000639695 NUBP1P53384 320 aa16.93■□□□□ 0.3
RFC1-217ENST00000639695 POTEJP0CG39 1038 aa16.92■□□□□ 0.3
RFC1-217ENST00000639695 BMP2KQ9NSY1 1161 aaPredicted RBP16.91■□□□□ 0.3
RFC1-217ENST00000639695 SLC39A7Q92504 469 aa16.89■□□□□ 0.29
RFC1-217ENST00000639695 C7P10643 843 aa16.87■□□□□ 0.29
RFC1-217ENST00000639695 POTEFA5A3E0 1075 aa16.82■□□□□ 0.28
RFC1-217ENST00000639695 ZBTB47Q9UFB7 747 aaPredicted RBP16.79■□□□□ 0.28
RFC1-217ENST00000639695 TIE1P35590 1138 aa16.78■□□□□ 0.28
RFC1-217ENST00000639695 TTLL13PA6NNM8 815 aa16.76■□□□□ 0.27
RFC1-217ENST00000639695 PCDHB13Q9Y5F0 798 aa16.75■□□□□ 0.27
RFC1-217ENST00000639695 IFNL1Q8IU54 200 aa16.71■□□□□ 0.27
RFC1-217ENST00000639695 FAM212AQ96EL1 285 aa16.7■□□□□ 0.26
RFC1-217ENST00000639695 SGIP1Q9BQI5 828 aa16.68■□□□□ 0.26
RFC1-217ENST00000639695 COLQQ9Y215 455 aaPredicted RBP16.68■□□□□ 0.26
RFC1-217ENST00000639695 FBXO3Q9UK99 471 aa16.64■□□□□ 0.25
RFC1-217ENST00000639695 TRIM35Q9UPQ4 493 aa16.64■□□□□ 0.25
RFC1-217ENST00000639695 DCAF8Q5TAQ9 597 aa16.59■□□□□ 0.25
RFC1-217ENST00000639695 MAMSTRQ6ZN01 415 aa16.59■□□□□ 0.25
RFC1-217ENST00000639695 PYGBP11216 843 aa16.58■□□□□ 0.24
RFC1-217ENST00000639695 VASPP50552 380 aaPredicted RBP16.57■□□□□ 0.24
RFC1-217ENST00000639695 TMEM106CQ9BVX2 250 aa16.56■□□□□ 0.24
RFC1-217ENST00000639695 POTEMA6NI47 508 aa16.53■□□□□ 0.24
RFC1-217ENST00000639695 SEC24BO95487 1268 aa16.53■□□□□ 0.24
RFC1-217ENST00000639695 SCUBE2Q9NQ36 999 aa16.53■□□□□ 0.24
RFC1-217ENST00000639695 LCE2DQ5TA82 110 aaPredicted RBP16.52■□□□□ 0.24
RFC1-217ENST00000639695 IER5LQ5T953 404 aa16.51■□□□□ 0.23
RFC1-217ENST00000639695 POTEGQ6S5H5 508 aa16.5■□□□□ 0.23
RFC1-217ENST00000639695 PCDHB8Q9UN66 801 aa16.5■□□□□ 0.23
RFC1-217ENST00000639695 KLHL34Q8N239 644 aa16.47■□□□□ 0.23
RFC1-217ENST00000639695 PLSCR2Q9NRY7 297 aa16.45■□□□□ 0.22
RFC1-217ENST00000639695 FAM163AQ96GL9 167 aaPredicted RBP16.41■□□□□ 0.22
RFC1-217ENST00000639695 IRX5P78411 483 aaPredicted RBP16.4■□□□□ 0.22
RFC1-217ENST00000639695 PLCG2P16885 1265 aa16.33■□□□□ 0.2
RFC1-217ENST00000639695 GSE1Q14687 1217 aa16.33■□□□□ 0.2
RFC1-217ENST00000639695 IFNLR1Q8IU57 520 aaPredicted RBP16.33■□□□□ 0.2
RFC1-217ENST00000639695 OCEL1Q9H607 264 aa16.26■□□□□ 0.19
RFC1-217ENST00000639695 CHRM1P11229 460 aaPredicted RBP16.25■□□□□ 0.19
RFC1-217ENST00000639695 SLAIN1Q8ND83 568 aa16.25■□□□□ 0.19
RFC1-217ENST00000639695 ZNF467Q7Z7K2 595 aaPredicted RBP16.23■□□□□ 0.19
RFC1-217ENST00000639695 SPOCK2Q92563 424 aa16.2■□□□□ 0.18
RFC1-217ENST00000639695 PDCD7Q8N8D1 485 aaKnown RBP16.18■□□□□ 0.18
RFC1-217ENST00000639695 PSEN1P49768 467 aa16.17■□□□□ 0.18
RFC1-217ENST00000639695 CIZ1Q9ULV3 898 aaPredicted RBP16.14■□□□□ 0.17
RFC1-217ENST00000639695 PCDH10Q9P2E7 1040 aa16.12■□□□□ 0.17
RFC1-217ENST00000639695 ST18O60284 1047 aa16.11■□□□□ 0.17
RFC1-217ENST00000639695 MKRN3Q13064 507 aaKnown RBP16.07■□□□□ 0.16
RFC1-217ENST00000639695 GOLGA2Q08379 1002 aa16.06■□□□□ 0.16
RFC1-217ENST00000639695 PDAP1Q13442 181 aaKnown RBP16.05■□□□□ 0.16
RFC1-217ENST00000639695 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.04■□□□□ 0.164e-7■■■■□ 21.6
RFC1-217ENST00000639695 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.04■□□□□ 0.16
RFC1-217ENST00000639695 DPY19L2Q6NUT2 758 aa16■□□□□ 0.15
RFC1-217ENST00000639695 ILDR1Q86SU0 546 aaPredicted RBP16■□□□□ 0.15
RFC1-217ENST00000639695 CABP2Q9NPB3 220 aa15.99■□□□□ 0.15
RFC1-217ENST00000639695 CDAN1Q8IWY9 1227 aa15.98■□□□□ 0.15
RFC1-217ENST00000639695 L3MBTL3Q96JM7 780 aaPredicted RBP15.93■□□□□ 0.14
RFC1-217ENST00000639695 C3orf67Q6ZVT6 689 aa15.92■□□□□ 0.14
RFC1-217ENST00000639695 MARVELD3Q96A59 401 aa15.87■□□□□ 0.13
RFC1-217ENST00000639695 SNPHO15079 494 aa15.85■□□□□ 0.13
RFC1-217ENST00000639695 RNF25Q96BH1 459 aaPredicted RBP15.83■□□□□ 0.12
RFC1-217ENST00000639695 TMEM121BQ9BXQ6 578 aaPredicted RBP15.82■□□□□ 0.12
RFC1-217ENST00000639695 EFCAB3Q8N7B9 438 aa15.81■□□□□ 0.12
RFC1-217ENST00000639695 TRIM41Q8WV44 630 aa15.8■□□□□ 0.12
RFC1-217ENST00000639695 BOLA1Q9Y3E2 137 aa15.79■□□□□ 0.12
RFC1-217ENST00000639695 POTEB3A0JP26 581 aa15.71■□□□□ 0.11
RFC1-217ENST00000639695 RIOK3O14730 519 aaKnown RBP15.71■□□□□ 0.11
RFC1-217ENST00000639695 POTEBQ6S5H4 581 aa15.71■□□□□ 0.11
RFC1-217ENST00000639695 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.7■□□□□ 0.1
RFC1-217ENST00000639695 ZFP91Q96JP5 570 aaPredicted RBP15.7■□□□□ 0.1
RFC1-217ENST00000639695 HOXB3P14651 431 aaPredicted RBP15.69■□□□□ 0.1
RFC1-217ENST00000639695 EMP3P54852 163 aa15.68■□□□□ 0.1
RFC1-217ENST00000639695 G3V3G9 751 aa15.67■□□□□ 0.1
RFC1-217ENST00000639695 MS4A4AQ96JQ5 239 aa15.65■□□□□ 0.1
RFC1-217ENST00000639695 VGFO15240 615 aaPredicted RBP15.61■□□□□ 0.09
RFC1-217ENST00000639695 AMER1Q5JTC6 1135 aaPredicted RBP15.61■□□□□ 0.09
RFC1-217ENST00000639695 TMEM92Q6UXU6 159 aa15.61■□□□□ 0.09
RFC1-217ENST00000639695 SPNS2Q8IVW8 549 aa15.61■□□□□ 0.09
RFC1-217ENST00000639695 PHF8Q9UPP1 1060 aa15.61■□□□□ 0.09
RFC1-217ENST00000639695 FAM205CA6NFA0 338 aa15.6■□□□□ 0.09
RFC1-217ENST00000639695 MICALL2Q8IY33 904 aa15.6■□□□□ 0.09
RFC1-217ENST00000639695 HS3ST6Q96QI5 342 aa15.6■□□□□ 0.09
RFC1-217ENST00000639695 SOX12O15370 315 aa15.56■□□□□ 0.08
RFC1-217ENST00000639695 KRTAP3-3Q9BYR6 98 aa15.56■□□□□ 0.08
RFC1-217ENST00000639695 KRTAP3-2Q9BYR7 98 aa15.56■□□□□ 0.08
RFC1-217ENST00000639695 MMRN1Q13201 1228 aa15.55■□□□□ 0.08
RFC1-217ENST00000639695 SLC24A1O60721 1099 aa15.51■□□□□ 0.07
RFC1-217ENST00000639695 RTN4Q9NQC3 1192 aaKnown RBP15.51■□□□□ 0.07
RFC1-217ENST00000639695 HOXB1P14653 301 aaPredicted RBP15.49■□□□□ 0.07
RFC1-217ENST00000639695 BCL11BQ9C0K0 894 aaPredicted RBP15.49■□□□□ 0.07
RFC1-217ENST00000639695 ZNF710Q8N1W2 664 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms