RNA–Protein interactions for RNA: ENST00000639496.1

KCNQ3-208, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

TSL 5

Gene KCNQ3, Length 4,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-208ENST00000639496 RRP7BPQ9NSQ0 103 aa13.71□□□□□ -0.22
KCNQ3-208ENST00000639496 CDCA8Q53HL2 280 aa13.7□□□□□ -0.22
KCNQ3-208ENST00000639496 MYH16Q9H6N6 1097 aa13.7□□□□□ -0.22
KCNQ3-208ENST00000639496 PLEKHG5O94827 1062 aa13.7□□□□□ -0.22
KCNQ3-208ENST00000639496 EEA1Q15075 1411 aa13.7□□□□□ -0.22
KCNQ3-208ENST00000639496 EIF4G2P78344 907 aaKnown RBP eCLIP13.69□□□□□ -0.22
KCNQ3-208ENST00000639496 CCDC180Q9P1Z9 1646 aa13.69□□□□□ -0.22
KCNQ3-208ENST00000639496 MRS2Q9HD23 443 aa13.68□□□□□ -0.22
KCNQ3-208ENST00000639496 BAZ1BQ9UIG0 1483 aaKnown RBP13.67□□□□□ -0.22
KCNQ3-208ENST00000639496 RGL3Q3MIN7 710 aa13.66□□□□□ -0.22
KCNQ3-208ENST00000639496 TRHP20396 242 aaPredicted RBP13.66□□□□□ -0.22
KCNQ3-208ENST00000639496 CFAP53Q96M91 514 aa13.66□□□□□ -0.22
KCNQ3-208ENST00000639496 KIF27Q86VH2 1401 aa13.65□□□□□ -0.22
KCNQ3-208ENST00000639496 SENP3Q9H4L4 574 aaPredicted RBP13.65□□□□□ -0.22
KCNQ3-208ENST00000639496 CCDC136Q96JN2 1154 aa13.62□□□□□ -0.23
KCNQ3-208ENST00000639496 NACADO15069 1562 aa13.62□□□□□ -0.23
KCNQ3-208ENST00000639496 WRNQ14191 1432 aaPredicted RBP eCLIP13.61□□□□□ -0.23
KCNQ3-208ENST00000639496 FKBP8Q14318 412 aa13.61□□□□□ -0.23
KCNQ3-208ENST00000639496 HDGFP51858 240 aaKnown RBP13.61□□□□□ -0.23
KCNQ3-208ENST00000639496 POGKQ9P215 609 aa13.6□□□□□ -0.23
KCNQ3-208ENST00000639496 LMOD2Q6P5Q4 547 aa13.59□□□□□ -0.23
KCNQ3-208ENST00000639496 GOLGA3Q08378 1498 aa13.58□□□□□ -0.24
KCNQ3-208ENST00000639496 KNSTRNQ9Y448 316 aa13.58□□□□□ -0.24
KCNQ3-208ENST00000639496 ARXQ96QS3 562 aa13.57□□□□□ -0.24
KCNQ3-208ENST00000639496 PPM1GO15355 546 aaPredicted RBP13.55□□□□□ -0.24
KCNQ3-208ENST00000639496 DCAF1Q9Y4B6 1507 aa13.55□□□□□ -0.24
KCNQ3-208ENST00000639496 NUDCQ9Y266 331 aa13.54□□□□□ -0.24
KCNQ3-208ENST00000639496 CDK11BP21127 795 aaKnown RBP13.54□□□□□ -0.24
KCNQ3-208ENST00000639496 CARD11Q9BXL7 1154 aa13.52□□□□□ -0.24
KCNQ3-208ENST00000639496 MAPK8IP3Q9UPT6 1336 aa13.5□□□□□ -0.25
KCNQ3-208ENST00000639496 KANK1Q14678 1352 aa13.5□□□□□ -0.25
KCNQ3-208ENST00000639496 NPHP1O15259 732 aa13.5□□□□□ -0.25
KCNQ3-208ENST00000639496 CCNB3Q8WWL7 1395 aa13.49□□□□□ -0.25
KCNQ3-208ENST00000639496 MLECQ14165 292 aa13.48□□□□□ -0.25
KCNQ3-208ENST00000639496 HIRIP3Q9BW71 556 aaPredicted RBP13.47□□□□□ -0.25
KCNQ3-208ENST00000639496 CEP162Q5TB80 1403 aa13.47□□□□□ -0.25
KCNQ3-208ENST00000639496 CEP164Q9UPV0 1460 aa13.47□□□□□ -0.25
KCNQ3-208ENST00000639496 EIF5BO60841 1220 aaKnown RBP13.46□□□□□ -0.25
KCNQ3-208ENST00000639496 FHAD1B1AJZ9 1412 aa13.44□□□□□ -0.26
KCNQ3-208ENST00000639496 PNNQ9H307 717 aaKnown RBP13.44□□□□□ -0.26
KCNQ3-208ENST00000639496 TNIKQ9UKE5 1360 aa13.42□□□□□ -0.26
KCNQ3-208ENST00000639496 CHMP4BQ9H444 224 aaKnown RBP13.42□□□□□ -0.26
KCNQ3-208ENST00000639496 CARMIL1Q5VZK9 1371 aa13.42□□□□□ -0.26
KCNQ3-208ENST00000639496 FTSJ3Q8IY81 847 aaKnown RBP13.41□□□□□ -0.26
KCNQ3-208ENST00000639496 NCLP19338 710 aaKnown RBP13.41□□□□□ -0.26
KCNQ3-208ENST00000639496 BAZ1AQ9NRL2 1556 aaPredicted RBP13.41□□□□□ -0.26
KCNQ3-208ENST00000639496 CARMIL2Q6F5E8 1435 aa13.4□□□□□ -0.26
KCNQ3-208ENST00000639496 CASC1Q6TDU7 716 aa13.39□□□□□ -0.27
KCNQ3-208ENST00000639496 PDS5BQ9NTI5 1447 aa13.39□□□□□ -0.27
KCNQ3-208ENST00000639496 GGT6Q6P531 493 aa13.39□□□□□ -0.27
KCNQ3-208ENST00000639496 NEUROD2Q15784 382 aa13.39□□□□□ -0.27
KCNQ3-208ENST00000639496 LAS1LQ9Y4W2 734 aaKnown RBP13.39□□□□□ -0.27
KCNQ3-208ENST00000639496 BECN1Q14457 450 aa13.38□□□□□ -0.27
KCNQ3-208ENST00000639496 TMF1P82094 1093 aa13.37□□□□□ -0.27
KCNQ3-208ENST00000639496 CUX2O14529 1486 aa13.37□□□□□ -0.27
KCNQ3-208ENST00000639496 MS4A1P11836 297 aa13.37□□□□□ -0.27
KCNQ3-208ENST00000639496 EFCAB2Q5VUJ9 269 aa13.37□□□□□ -0.27
KCNQ3-208ENST00000639496 U2SURPO15042 1029 aaKnown RBP13.36□□□□□ -0.27
KCNQ3-208ENST00000639496 SRPK2P78362 688 aaKnown RBP13.36□□□□□ -0.27
KCNQ3-208ENST00000639496 GOLGA6L22H0YM25 854 aa13.35□□□□□ -0.27
KCNQ3-208ENST00000639496 ZRSR1Q15695 479 aaKnown RBP13.35□□□□□ -0.27
KCNQ3-208ENST00000639496 GOLGA2Q08379 1002 aa13.34□□□□□ -0.27
KCNQ3-208ENST00000639496 DCAF11Q8TEB1 546 aa13.34□□□□□ -0.27
KCNQ3-208ENST00000639496 TNNT2P45379 298 aaPredicted RBP13.33□□□□□ -0.28
KCNQ3-208ENST00000639496 EIF4G1Q04637 1599 aaKnown RBP13.33□□□□□ -0.28
KCNQ3-208ENST00000639496 ANP32EQ9BTT0 268 aa13.32□□□□□ -0.28
KCNQ3-208ENST00000639496 OS9Q13438 667 aaPredicted RBP13.32□□□□□ -0.28
KCNQ3-208ENST00000639496 DDRGK1Q96HY6 314 aa13.3□□□□□ -0.28
KCNQ3-208ENST00000639496 MIER1Q8N108 512 aa13.3□□□□□ -0.28
KCNQ3-208ENST00000639496 SOX12O15370 315 aa13.29□□□□□ -0.28
KCNQ3-208ENST00000639496 IRX6P78412 446 aaPredicted RBP13.29□□□□□ -0.28
KCNQ3-208ENST00000639496 HDGFL2Q7Z4V5 671 aaPredicted RBP13.29□□□□□ -0.28
KCNQ3-208ENST00000639496 TIMELESSQ9UNS1 1208 aa13.28□□□□□ -0.28
KCNQ3-208ENST00000639496 FGD1P98174 961 aa13.27□□□□□ -0.29
KCNQ3-208ENST00000639496 MORC1Q86VD1 984 aa13.27□□□□□ -0.29
KCNQ3-208ENST00000639496 RTF1Q92541 710 aaKnown RBP13.27□□□□□ -0.29
KCNQ3-208ENST00000639496 SAFB2Q14151 953 aaKnown RBP eCLIP13.26□□□□□ -0.29
KCNQ3-208ENST00000639496 CHMP4AQ9BY43 222 aa13.26□□□□□ -0.29
KCNQ3-208ENST00000639496 FRAT1Q92837 279 aaPredicted RBP13.26□□□□□ -0.29
KCNQ3-208ENST00000639496 CC2D1BQ5T0F9 858 aaKnown RBP13.25□□□□□ -0.29
KCNQ3-208ENST00000639496 EID1Q9Y6B2 187 aa13.25□□□□□ -0.29
KCNQ3-208ENST00000639496 SIN3AQ96ST3 1273 aa13.25□□□□□ -0.29
KCNQ3-208ENST00000639496 CSB-PGBD3P0DP91 1061 aa13.25□□□□□ -0.29
KCNQ3-208ENST00000639496 STK26Q9P289 416 aa13.25□□□□□ -0.29
KCNQ3-208ENST00000639496 SOGA1O94964 1423 aa13.24□□□□□ -0.29
KCNQ3-208ENST00000639496 KCNJ4P48050 445 aa13.24□□□□□ -0.29
KCNQ3-208ENST00000639496 TDRD9Q8NDG6 1382 aaKnown RBP13.23□□□□□ -0.29
KCNQ3-208ENST00000639496 PAK3O75914 559 aaPredicted RBP13.23□□□□□ -0.29
KCNQ3-208ENST00000639496 PKD2Q13563 968 aa13.22□□□□□ -0.29
KCNQ3-208ENST00000639496 RSPH4AQ5TD94 716 aa13.22□□□□□ -0.29
KCNQ3-208ENST00000639496 CECR2Q9BXF3 1484 aa13.21□□□□□ -0.3
KCNQ3-208ENST00000639496 KIF3BO15066 747 aa13.2□□□□□ -0.3
KCNQ3-208ENST00000639496 SMARCA2P51531 1590 aa13.19□□□□□ -0.3
KCNQ3-208ENST00000639496 CALD1Q05682 793 aaKnown RBP13.19□□□□□ -0.3
KCNQ3-208ENST00000639496 NBR1Q14596 966 aa13.19□□□□□ -0.3
KCNQ3-208ENST00000639496 TMX4Q9H1E5 349 aaPredicted RBP13.19□□□□□ -0.3
KCNQ3-208ENST00000639496 FMN1Q68DA7 1419 aa13.19□□□□□ -0.3
KCNQ3-208ENST00000639496 SENP3-EIF4A1A0A087X0R7 540 aa13.19□□□□□ -0.3
KCNQ3-208ENST00000639496 TULP1O00294 542 aaPredicted RBP13.18□□□□□ -0.3
KCNQ3-208ENST00000639496 ANKRD30AQ9BXX3 1397 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms