RNA–Protein interactions for RNA: ENST00000639453.1

CCDC7-214, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-214ENST00000639453 FKBP8Q14318 412 aa13.88□□□□□ -0.19
CCDC7-214ENST00000639453 ASTLQ6HA08 431 aaPredicted RBP13.86□□□□□ -0.19
CCDC7-214ENST00000639453 SLC39A7Q92504 469 aa13.86□□□□□ -0.19
CCDC7-214ENST00000639453 C7P10643 843 aa13.85□□□□□ -0.19
CCDC7-214ENST00000639453 KIF12Q96FN5 646 aa13.83□□□□□ -0.2
CCDC7-214ENST00000639453 ATMINO43313 823 aaPredicted RBP13.82□□□□□ -0.2
CCDC7-214ENST00000639453 METRNQ9UJH8 293 aa13.82□□□□□ -0.2
CCDC7-214ENST00000639453 RASEFQ8IZ41 740 aa13.8□□□□□ -0.2
CCDC7-214ENST00000639453 PELP1Q8IZL8 1130 aaKnown RBP13.79□□□□□ -0.2
CCDC7-214ENST00000639453 FBXO3Q9UK99 471 aa13.77□□□□□ -0.21
CCDC7-214ENST00000639453 MAP3K13O43283 966 aa13.75□□□□□ -0.21
CCDC7-214ENST00000639453 MAMSTRQ6ZN01 415 aa13.75□□□□□ -0.21
CCDC7-214ENST00000639453 FAM212AQ96EL1 285 aa13.74□□□□□ -0.21
CCDC7-214ENST00000639453 OTUD5Q96G74 571 aa13.74□□□□□ -0.21
CCDC7-214ENST00000639453 TIE1P35590 1138 aa13.72□□□□□ -0.21
CCDC7-214ENST00000639453 POTEB2H3BUK9 544 aa13.71□□□□□ -0.21
CCDC7-214ENST00000639453 ATN1P54259 1190 aaPredicted RBP13.71□□□□□ -0.21
CCDC7-214ENST00000639453 SGIP1Q9BQI5 828 aa13.71□□□□□ -0.21
CCDC7-214ENST00000639453 PCDHB13Q9Y5F0 798 aa13.68□□□□□ -0.22
CCDC7-214ENST00000639453 BMP2KQ9NSY1 1161 aaPredicted RBP13.67□□□□□ -0.22
CCDC7-214ENST00000639453 NUBP1P53384 320 aa13.66□□□□□ -0.22
CCDC7-214ENST00000639453 SCUBE2Q9NQ36 999 aa13.65□□□□□ -0.22
CCDC7-214ENST00000639453 SEC24BO95487 1268 aa13.64□□□□□ -0.23
CCDC7-214ENST00000639453 TTLL13PA6NNM8 815 aa13.59□□□□□ -0.23
CCDC7-214ENST00000639453 DCAF8Q5TAQ9 597 aa13.59□□□□□ -0.23
CCDC7-214ENST00000639453 TRPC6Q9Y210 931 aa13.58□□□□□ -0.24
CCDC7-214ENST00000639453 KLHL34Q8N239 644 aa13.56□□□□□ -0.24
CCDC7-214ENST00000639453 IER5LQ5T953 404 aa13.55□□□□□ -0.24
CCDC7-214ENST00000639453 TRIM35Q9UPQ4 493 aa13.54□□□□□ -0.24
CCDC7-214ENST00000639453 IFNL1Q8IU54 200 aa13.52□□□□□ -0.25
CCDC7-214ENST00000639453 TMEM106CQ9BVX2 250 aa13.5□□□□□ -0.25
CCDC7-214ENST00000639453 POTEJP0CG39 1038 aa13.48□□□□□ -0.25
CCDC7-214ENST00000639453 PLSCR2Q9NRY7 297 aa13.48□□□□□ -0.25
CCDC7-214ENST00000639453 POTEMA6NI47 508 aa13.47□□□□□ -0.25
CCDC7-214ENST00000639453 VASPP50552 380 aaPredicted RBP13.46□□□□□ -0.25
CCDC7-214ENST00000639453 GSE1Q14687 1217 aa13.46□□□□□ -0.25
CCDC7-214ENST00000639453 PYGBP11216 843 aa13.45□□□□□ -0.26
CCDC7-214ENST00000639453 POTEFA5A3E0 1075 aa13.43□□□□□ -0.26
CCDC7-214ENST00000639453 PLCG2P16885 1265 aa13.43□□□□□ -0.26
CCDC7-214ENST00000639453 POTEGQ6S5H5 508 aa13.43□□□□□ -0.26
CCDC7-214ENST00000639453 COLQQ9Y215 455 aaPredicted RBP13.43□□□□□ -0.26
CCDC7-214ENST00000639453 FAM163AQ96GL9 167 aaPredicted RBP13.4□□□□□ -0.26
CCDC7-214ENST00000639453 PCDH10Q9P2E7 1040 aa13.39□□□□□ -0.27
CCDC7-214ENST00000639453 ZNF467Q7Z7K2 595 aaPredicted RBP13.35□□□□□ -0.27
CCDC7-214ENST00000639453 GOLGA2Q08379 1002 aa13.34□□□□□ -0.27
CCDC7-214ENST00000639453 PCDHB8Q9UN66 801 aa13.33□□□□□ -0.28
CCDC7-214ENST00000639453 OCEL1Q9H607 264 aa13.31□□□□□ -0.28
CCDC7-214ENST00000639453 SLAIN1Q8ND83 568 aa13.29□□□□□ -0.28
CCDC7-214ENST00000639453 IRX5P78411 483 aaPredicted RBP13.27□□□□□ -0.29
CCDC7-214ENST00000639453 CHRM1P11229 460 aaPredicted RBP13.26□□□□□ -0.29
CCDC7-214ENST00000639453 MKRN3Q13064 507 aaKnown RBP13.25□□□□□ -0.29
CCDC7-214ENST00000639453 SPOCK2Q92563 424 aa13.25□□□□□ -0.29
CCDC7-214ENST00000639453 CIZ1Q9ULV3 898 aaPredicted RBP13.22□□□□□ -0.29
CCDC7-214ENST00000639453 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.21□□□□□ -0.29
CCDC7-214ENST00000639453 SNPHO15079 494 aa13.17□□□□□ -0.3
CCDC7-214ENST00000639453 PSEN1P49768 467 aa13.16□□□□□ -0.3
CCDC7-214ENST00000639453 LCE2DQ5TA82 110 aaPredicted RBP13.15□□□□□ -0.3
CCDC7-214ENST00000639453 L3MBTL3Q96JM7 780 aaPredicted RBP13.15□□□□□ -0.3
CCDC7-214ENST00000639453 PDAP1Q13442 181 aaKnown RBP13.14□□□□□ -0.31
CCDC7-214ENST00000639453 IFNLR1Q8IU57 520 aaPredicted RBP13.14□□□□□ -0.31
CCDC7-214ENST00000639453 C3orf67Q6ZVT6 689 aa13.13□□□□□ -0.31
CCDC7-214ENST00000639453 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.12□□□□□ -0.31
CCDC7-214ENST00000639453 G3V3G9 751 aa13.08□□□□□ -0.32
CCDC7-214ENST00000639453 TRIM41Q8WV44 630 aa13.08□□□□□ -0.32
CCDC7-214ENST00000639453 ST18O60284 1047 aa13.07□□□□□ -0.32
CCDC7-214ENST00000639453 TMEM121BQ9BXQ6 578 aaPredicted RBP13.05□□□□□ -0.32
CCDC7-214ENST00000639453 CDAN1Q8IWY9 1227 aa13.04□□□□□ -0.32
CCDC7-214ENST00000639453 PDCD7Q8N8D1 485 aaKnown RBP13.04□□□□□ -0.32
CCDC7-214ENST00000639453 CABP2Q9NPB3 220 aa13.02□□□□□ -0.33
CCDC7-214ENST00000639453 BOLA1Q9Y3E2 137 aa12.9□□□□□ -0.34
CCDC7-214ENST00000639453 ILDR1Q86SU0 546 aaPredicted RBP12.89□□□□□ -0.35
CCDC7-214ENST00000639453 MARVELD3Q96A59 401 aa12.86□□□□□ -0.35
CCDC7-214ENST00000639453 EMP3P54852 163 aa12.84□□□□□ -0.35
CCDC7-214ENST00000639453 DPY19L2Q6NUT2 758 aa12.84□□□□□ -0.35
CCDC7-214ENST00000639453 RIOK3O14730 519 aaKnown RBP12.83□□□□□ -0.36
CCDC7-214ENST00000639453 TAOK2Q9UL54 1235 aa12.83□□□□□ -0.36
CCDC7-214ENST00000639453 EFCAB3Q8N7B9 438 aa12.81□□□□□ -0.36
CCDC7-214ENST00000639453 ZNF710Q8N1W2 664 aa12.79□□□□□ -0.36
CCDC7-214ENST00000639453 VGFO15240 615 aaPredicted RBP12.78□□□□□ -0.36
CCDC7-214ENST00000639453 SOX12O15370 315 aa12.77□□□□□ -0.37
CCDC7-214ENST00000639453 RIMBP2O15034 1052 aa12.75□□□□□ -0.37
CCDC7-214ENST00000639453 DOK7Q18PE1 504 aa12.75□□□□□ -0.37
CCDC7-214ENST00000639453 FAM205CA6NFA0 338 aa12.72□□□□□ -0.37
CCDC7-214ENST00000639453 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.71□□□□□ -0.37
CCDC7-214ENST00000639453 ZFP91Q96JP5 570 aaPredicted RBP12.71□□□□□ -0.37
CCDC7-214ENST00000639453 HS3ST6Q96QI5 342 aa12.69□□□□□ -0.38
CCDC7-214ENST00000639453 SPNS2Q8IVW8 549 aa12.68□□□□□ -0.38
CCDC7-214ENST00000639453 MMRN1Q13201 1228 aa12.65□□□□□ -0.38
CCDC7-214ENST00000639453 MICALL2Q8IY33 904 aa12.65□□□□□ -0.38
CCDC7-214ENST00000639453 RNF25Q96BH1 459 aaPredicted RBP12.65□□□□□ -0.38
CCDC7-214ENST00000639453 HOXB3P14651 431 aaPredicted RBP12.63□□□□□ -0.39
CCDC7-214ENST00000639453 HOXB1P14653 301 aaPredicted RBP12.63□□□□□ -0.39
CCDC7-214ENST00000639453 NLRP6P59044 892 aa12.63□□□□□ -0.39
CCDC7-214ENST00000639453 ERBB3P21860 1342 aa12.62□□□□□ -0.39
CCDC7-214ENST00000639453 PHF8Q9UPP1 1060 aa12.61□□□□□ -0.39
CCDC7-214ENST00000639453 BCL11BQ9C0K0 894 aaPredicted RBP12.59□□□□□ -0.39
CCDC7-214ENST00000639453 ZSWIM6Q9HCJ5 1215 aa12.59□□□□□ -0.39
CCDC7-214ENST00000639453 STK24Q9Y6E0 443 aa12.59□□□□□ -0.39
CCDC7-214ENST00000639453 ECM2O94769 699 aaPredicted RBP12.57□□□□□ -0.4
CCDC7-214ENST00000639453 STK25O00506 426 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms