RNA–Protein interactions for RNA: ENST00000639324.1

SCARB2-217, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-217ENST00000639324 MS4A3Q96HJ5 214 aa16■□□□□ 0.15
SCARB2-217ENST00000639324 NUBP1P53384 320 aa15.92■□□□□ 0.14
SCARB2-217ENST00000639324 PELP1Q8IZL8 1130 aaKnown RBP15.92■□□□□ 0.14
SCARB2-217ENST00000639324 KIF12Q96FN5 646 aa15.92■□□□□ 0.14
SCARB2-217ENST00000639324 ASTLQ6HA08 431 aaPredicted RBP15.86■□□□□ 0.13
SCARB2-217ENST00000639324 ZBTB47Q9UFB7 747 aaPredicted RBP15.85■□□□□ 0.13
SCARB2-217ENST00000639324 MAP3K13O43283 966 aa15.84■□□□□ 0.13
SCARB2-217ENST00000639324 FBXO3Q9UK99 471 aa15.84■□□□□ 0.13
SCARB2-217ENST00000639324 ATMINO43313 823 aaPredicted RBP15.83■□□□□ 0.12
SCARB2-217ENST00000639324 TRPC6Q9Y210 931 aa15.83■□□□□ 0.12
SCARB2-217ENST00000639324 POTEB2H3BUK9 544 aa15.8■□□□□ 0.12
SCARB2-217ENST00000639324 VASPP50552 380 aaPredicted RBP15.74■□□□□ 0.11
SCARB2-217ENST00000639324 ATN1P54259 1190 aaPredicted RBP15.74■□□□□ 0.11
SCARB2-217ENST00000639324 BMP2KQ9NSY1 1161 aaPredicted RBP15.73■□□□□ 0.11
SCARB2-217ENST00000639324 FAM212AQ96EL1 285 aa15.7■□□□□ 0.1
SCARB2-217ENST00000639324 METRNQ9UJH8 293 aa15.69■□□□□ 0.1
SCARB2-217ENST00000639324 OTUD5Q96G74 571 aa15.66■□□□□ 0.1
SCARB2-217ENST00000639324 TIE1P35590 1138 aa15.65■□□□□ 0.1
SCARB2-217ENST00000639324 SLC39A7Q92504 469 aa15.65■□□□□ 0.1
SCARB2-217ENST00000639324 SGIP1Q9BQI5 828 aa15.65■□□□□ 0.1
SCARB2-217ENST00000639324 PCDHB13Q9Y5F0 798 aa15.65■□□□□ 0.1
SCARB2-217ENST00000639324 C7P10643 843 aa15.64■□□□□ 0.09
SCARB2-217ENST00000639324 IFNL1Q8IU54 200 aa15.63■□□□□ 0.09
SCARB2-217ENST00000639324 POTEJP0CG39 1038 aa15.62■□□□□ 0.09
SCARB2-217ENST00000639324 TTLL13PA6NNM8 815 aa15.61■□□□□ 0.09
SCARB2-217ENST00000639324 POTEFA5A3E0 1075 aa15.59■□□□□ 0.09
SCARB2-217ENST00000639324 DCAF8Q5TAQ9 597 aa15.59■□□□□ 0.09
SCARB2-217ENST00000639324 KLHL34Q8N239 644 aa15.56■□□□□ 0.08
SCARB2-217ENST00000639324 PYGBP11216 843 aa15.55■□□□□ 0.08
SCARB2-217ENST00000639324 IFNLR1Q8IU57 520 aaPredicted RBP15.53■□□□□ 0.08
SCARB2-217ENST00000639324 TRIM35Q9UPQ4 493 aa15.49■□□□□ 0.07
SCARB2-217ENST00000639324 COLQQ9Y215 455 aaPredicted RBP15.47■□□□□ 0.07
SCARB2-217ENST00000639324 TMEM106CQ9BVX2 250 aa15.45■□□□□ 0.06
SCARB2-217ENST00000639324 PCDHB8Q9UN66 801 aa15.45■□□□□ 0.06
SCARB2-217ENST00000639324 GSE1Q14687 1217 aa15.42■□□□□ 0.06
SCARB2-217ENST00000639324 IER5LQ5T953 404 aa15.38■□□□□ 0.05
SCARB2-217ENST00000639324 SPOCK2Q92563 424 aa15.37■□□□□ 0.05
SCARB2-217ENST00000639324 CHRM1P11229 460 aaPredicted RBP15.35■□□□□ 0.05
SCARB2-217ENST00000639324 SEC24BO95487 1268 aa15.34■□□□□ 0.05
SCARB2-217ENST00000639324 MAMSTRQ6ZN01 415 aa15.32■□□□□ 0.04
SCARB2-217ENST00000639324 IRX5P78411 483 aaPredicted RBP15.29■□□□□ 0.04
SCARB2-217ENST00000639324 SCUBE2Q9NQ36 999 aa15.27■□□□□ 0.04
SCARB2-217ENST00000639324 ZNF467Q7Z7K2 595 aaPredicted RBP15.26■□□□□ 0.03
SCARB2-217ENST00000639324 CIZ1Q9ULV3 898 aaPredicted RBP15.25■□□□□ 0.03
SCARB2-217ENST00000639324 PLCG2P16885 1265 aa15.19■□□□□ 0.02
SCARB2-217ENST00000639324 LCE2DQ5TA82 110 aaPredicted RBP15.19■□□□□ 0.02
SCARB2-217ENST00000639324 PSEN1P49768 467 aa15.18■□□□□ 0.02
SCARB2-217ENST00000639324 OCEL1Q9H607 264 aa15.16■□□□□ 0.02
SCARB2-217ENST00000639324 PDCD7Q8N8D1 485 aaKnown RBP15.12■□□□□ 0.01
SCARB2-217ENST00000639324 POTEMA6NI47 508 aa15.1■□□□□ 0.01
SCARB2-217ENST00000639324 PDAP1Q13442 181 aaKnown RBP15.1■□□□□ 0.01
SCARB2-217ENST00000639324 POTEGQ6S5H5 508 aa15.08■□□□□ 0
SCARB2-217ENST00000639324 FAM163AQ96GL9 167 aaPredicted RBP15.05■□□□□ -0
SCARB2-217ENST00000639324 MKRN3Q13064 507 aaKnown RBP15.04■□□□□ -0
SCARB2-217ENST00000639324 ILDR1Q86SU0 546 aaPredicted RBP15.03■□□□□ -0
SCARB2-217ENST00000639324 SLAIN1Q8ND83 568 aa15.03■□□□□ -0
SCARB2-217ENST00000639324 GOLGA2Q08379 1002 aa15.02■□□□□ -0
SCARB2-217ENST00000639324 TRIM41Q8WV44 630 aa15.01□□□□□ -0.01
SCARB2-217ENST00000639324 RNF25Q96BH1 459 aaPredicted RBP15□□□□□ -0.01
SCARB2-217ENST00000639324 CABP2Q9NPB3 220 aa15□□□□□ -0.01
SCARB2-217ENST00000639324 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.99□□□□□ -0.01
SCARB2-217ENST00000639324 DPY19L2Q6NUT2 758 aa14.94□□□□□ -0.02
SCARB2-217ENST00000639324 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.9□□□□□ -0.02
SCARB2-217ENST00000639324 RIOK3O14730 519 aaKnown RBP14.88□□□□□ -0.03
SCARB2-217ENST00000639324 L3MBTL3Q96JM7 780 aaPredicted RBP14.87□□□□□ -0.03
SCARB2-217ENST00000639324 ST18O60284 1047 aa14.86□□□□□ -0.03
SCARB2-217ENST00000639324 EFCAB3Q8N7B9 438 aa14.86□□□□□ -0.03
SCARB2-217ENST00000639324 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.83□□□□□ -0.04
SCARB2-217ENST00000639324 ZFP91Q96JP5 570 aaPredicted RBP14.83□□□□□ -0.04
SCARB2-217ENST00000639324 PLSCR2Q9NRY7 297 aa14.83□□□□□ -0.04
SCARB2-217ENST00000639324 C3orf67Q6ZVT6 689 aa14.81□□□□□ -0.04
SCARB2-217ENST00000639324 VGFO15240 615 aaPredicted RBP14.78□□□□□ -0.04
SCARB2-217ENST00000639324 PCDH10Q9P2E7 1040 aa14.77□□□□□ -0.05
SCARB2-217ENST00000639324 BOLA1Q9Y3E2 137 aa14.77□□□□□ -0.05
SCARB2-217ENST00000639324 TMEM121BQ9BXQ6 578 aaPredicted RBP14.73□□□□□ -0.05
SCARB2-217ENST00000639324 PKD2Q13563 968 aa14.72□□□□□ -0.05
SCARB2-217ENST00000639324 MS4A4AQ96JQ5 239 aa14.72□□□□□ -0.05
SCARB2-217ENST00000639324 SNPHO15079 494 aa14.69□□□□□ -0.06
SCARB2-217ENST00000639324 PHF8Q9UPP1 1060 aa14.68□□□□□ -0.06
SCARB2-217ENST00000639324 SOX12O15370 315 aa14.67□□□□□ -0.06
SCARB2-217ENST00000639324 ECM2O94769 699 aaPredicted RBP14.67□□□□□ -0.06
SCARB2-217ENST00000639324 CDAN1Q8IWY9 1227 aa14.65□□□□□ -0.06
SCARB2-217ENST00000639324 BCL11BQ9C0K0 894 aaPredicted RBP14.65□□□□□ -0.06
SCARB2-217ENST00000639324 G3V3G9 751 aa14.63□□□□□ -0.07
SCARB2-217ENST00000639324 RGL2O15211 777 aa14.63□□□□□ -0.07
SCARB2-217ENST00000639324 MARVELD3Q96A59 401 aa14.63□□□□□ -0.07
SCARB2-217ENST00000639324 MICALL2Q8IY33 904 aa14.62□□□□□ -0.07
SCARB2-217ENST00000639324 TMEM92Q6UXU6 159 aa14.6□□□□□ -0.07
SCARB2-217ENST00000639324 HOXB3P14651 431 aaPredicted RBP14.59□□□□□ -0.07
SCARB2-217ENST00000639324 FBXO22Q8NEZ5 403 aa14.59□□□□□ -0.07
SCARB2-217ENST00000639324 STK24Q9Y6E0 443 aa14.58□□□□□ -0.08
SCARB2-217ENST00000639324 STK25O00506 426 aa14.55□□□□□ -0.08
SCARB2-217ENST00000639324 MFRPQ9BY79 579 aa14.55□□□□□ -0.08
SCARB2-217ENST00000639324 TAOK2Q9UL54 1235 aa14.54□□□□□ -0.08
SCARB2-217ENST00000639324 POTEB3A0JP26 581 aa14.51□□□□□ -0.09
SCARB2-217ENST00000639324 NLRP6P59044 892 aa14.51□□□□□ -0.09
SCARB2-217ENST00000639324 POTEBQ6S5H4 581 aa14.51□□□□□ -0.09
SCARB2-217ENST00000639324 EMP3P54852 163 aa14.49□□□□□ -0.09
SCARB2-217ENST00000639324 HS3ST6Q96QI5 342 aa14.42□□□□□ -0.1
SCARB2-217ENST00000639324 FAM205CA6NFA0 338 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms