RNA–Protein interactions for RNA: ENST00000637874.1

EFHC1-236, Transcript of EF-hand domain containing 1, humanhuman

TSL 3

Gene EFHC1, Length 490 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-236ENST00000637874 SCUBE2Q9NQ36 999 aa9.3□□□□□ -0.92
EFHC1-236ENST00000637874 PRKCSHP14314 528 aaPredicted RBP9.27□□□□□ -0.93
EFHC1-236ENST00000637874 BCANQ96GW7 911 aa9.27□□□□□ -0.93
EFHC1-236ENST00000637874 ZRANB1Q9UGI0 708 aa9.27□□□□□ -0.93
EFHC1-236ENST00000637874 METRNQ9UJH8 293 aa9.27□□□□□ -0.93
EFHC1-236ENST00000637874 PELP1Q8IZL8 1130 aaKnown RBP9.26□□□□□ -0.93
EFHC1-236ENST00000637874 SPDYE4A6NLX3 237 aa9.22□□□□□ -0.93
EFHC1-236ENST00000637874 C7P10643 843 aa9.2□□□□□ -0.94
EFHC1-236ENST00000637874 VASPP50552 380 aaPredicted RBP9.2□□□□□ -0.94
EFHC1-236ENST00000637874 SLC39A7Q92504 469 aa9.19□□□□□ -0.94
EFHC1-236ENST00000637874 SSUH2Q9Y2M2 353 aa9.19□□□□□ -0.94
EFHC1-236ENST00000637874 TAOK2Q9UL54 1235 aa9.18□□□□□ -0.94
EFHC1-236ENST00000637874 ZNF692Q9BU19 519 aaPredicted RBP9.16□□□□□ -0.94
EFHC1-236ENST00000637874 VSIG10Q8N0Z9 540 aa9.14□□□□□ -0.95
EFHC1-236ENST00000637874 IFNLR1Q8IU57 520 aaPredicted RBP9.13□□□□□ -0.95
EFHC1-236ENST00000637874 FBLN2P98095 1184 aa9.12□□□□□ -0.95
EFHC1-236ENST00000637874 ASTLQ6HA08 431 aaPredicted RBP9.09□□□□□ -0.95
EFHC1-236ENST00000637874 PKD2Q13563 968 aa9.08□□□□□ -0.96
EFHC1-236ENST00000637874 TPRNQ4KMQ1 711 aa9.07□□□□□ -0.96
EFHC1-236ENST00000637874 PROM2Q8N271 834 aa9.07□□□□□ -0.96
EFHC1-236ENST00000637874 MKRN4PQ13434 485 aaPredicted RBP9.06□□□□□ -0.96
EFHC1-236ENST00000637874 ATMINO43313 823 aaPredicted RBP9.03□□□□□ -0.96
EFHC1-236ENST00000637874 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.03□□□□□ -0.96
EFHC1-236ENST00000637874 ST18O60284 1047 aa9.02□□□□□ -0.97
EFHC1-236ENST00000637874 PHF12Q96QT6 1004 aa9.02□□□□□ -0.97
EFHC1-236ENST00000637874 KDM2AQ9Y2K7 1162 aa9.01□□□□□ -0.97
EFHC1-236ENST00000637874 PAXIP1Q6ZW49 1069 aaPredicted RBP9□□□□□ -0.97
EFHC1-236ENST00000637874 CFAP44Q96MT7 982 aa8.99□□□□□ -0.97
EFHC1-236ENST00000637874 PAK3O75914 559 aaPredicted RBP8.98□□□□□ -0.97
EFHC1-236ENST00000637874 PABPN1Q86U42 306 aaKnown RBP eCLIP8.98□□□□□ -0.97
EFHC1-236ENST00000637874 BBXQ8WY36 941 aaPredicted RBP8.98□□□□□ -0.97
EFHC1-236ENST00000637874 ECM2O94769 699 aaPredicted RBP8.95□□□□□ -0.98
EFHC1-236ENST00000637874 KLHL34Q8N239 644 aa8.93□□□□□ -0.98
EFHC1-236ENST00000637874 NPM1P06748 294 aaKnown RBP eCLIP8.92□□□□□ -0.98
EFHC1-236ENST00000637874 SPOCK2Q92563 424 aa8.9□□□□□ -0.98
EFHC1-236ENST00000637874 TMEM121BQ9BXQ6 578 aaPredicted RBP8.88□□□□□ -0.99
EFHC1-236ENST00000637874 POTEFA5A3E0 1075 aa8.87□□□□□ -0.99
EFHC1-236ENST00000637874 MS4A3Q96HJ5 214 aa8.87□□□□□ -0.99
EFHC1-236ENST00000637874 TSHZ2Q9NRE2 1034 aa8.85□□□□□ -0.99
EFHC1-236ENST00000637874 SPRYD3Q8NCJ5 442 aa8.84□□□□□ -0.99
EFHC1-236ENST00000637874 ATN1P54259 1190 aaPredicted RBP8.83□□□□□ -1
EFHC1-236ENST00000637874 RGL2O15211 777 aa8.82□□□□□ -1
EFHC1-236ENST00000637874 SLAIN1Q8ND83 568 aa8.81□□□□□ -1
EFHC1-236ENST00000637874 NBR1Q14596 966 aa8.77□□□□□ -1.01
EFHC1-236ENST00000637874 CREBZFQ9NS37 354 aa8.77□□□□□ -1.01
EFHC1-236ENST00000637874 PLCD3Q8N3E9 789 aa8.76□□□□□ -1.01
EFHC1-236ENST00000637874 CHGAP10645 457 aaKnown RBP8.74□□□□□ -1.01
EFHC1-236ENST00000637874 MARVELD3Q96A59 401 aa8.74□□□□□ -1.01
EFHC1-236ENST00000637874 SEC24BO95487 1268 aa8.72□□□□□ -1.01
EFHC1-236ENST00000637874 KRTAP3-3Q9BYR6 98 aa8.72□□□□□ -1.01
EFHC1-236ENST00000637874 KRTAP3-2Q9BYR7 98 aa8.72□□□□□ -1.01
EFHC1-236ENST00000637874 TIMELESSQ9UNS1 1208 aa8.72□□□□□ -1.01
EFHC1-236ENST00000637874 STAG3Q9UJ98 1225 aa8.71□□□□□ -1.02
EFHC1-236ENST00000637874 TULP1O00294 542 aaPredicted RBP8.7□□□□□ -1.02
EFHC1-236ENST00000637874 CIZ1Q9ULV3 898 aaPredicted RBP8.7□□□□□ -1.02
EFHC1-236ENST00000637874 COLQQ9Y215 455 aaPredicted RBP8.69□□□□□ -1.02
EFHC1-236ENST00000637874 MIER1Q8N108 512 aa8.68□□□□□ -1.02
EFHC1-236ENST00000637874 SNPHO15079 494 aa8.65□□□□□ -1.02
EFHC1-236ENST00000637874 BMP2KQ9NSY1 1161 aaPredicted RBP8.65□□□□□ -1.02
EFHC1-236ENST00000637874 GTF3C3Q9Y5Q9 886 aa8.64□□□□□ -1.03
EFHC1-236ENST00000637874 RNF166Q96A37 237 aaPredicted RBP8.63□□□□□ -1.03
EFHC1-236ENST00000637874 DNAJC5Q9H3Z4 198 aa8.63□□□□□ -1.03
EFHC1-236ENST00000637874 EMP3P54852 163 aa8.6□□□□□ -1.03
EFHC1-236ENST00000637874 HS6ST3Q8IZP7 471 aa8.58□□□□□ -1.04
EFHC1-236ENST00000637874 PLEKHG5O94827 1062 aa8.57□□□□□ -1.04
EFHC1-236ENST00000637874 HS3ST6Q96QI5 342 aa8.57□□□□□ -1.04
EFHC1-236ENST00000637874 TIE1P35590 1138 aa8.55□□□□□ -1.04
EFHC1-236ENST00000637874 ZBTB47Q9UFB7 747 aaPredicted RBP8.55□□□□□ -1.04
EFHC1-236ENST00000637874 TRIM41Q8WV44 630 aa8.54□□□□□ -1.04
EFHC1-236ENST00000637874 IER5LQ5T953 404 aa8.53□□□□□ -1.04
EFHC1-236ENST00000637874 ARXQ96QS3 562 aa8.52□□□□□ -1.05
EFHC1-236ENST00000637874 POTEB3A0JP26 581 aa8.51□□□□□ -1.05
EFHC1-236ENST00000637874 POTEBQ6S5H4 581 aa8.51□□□□□ -1.05
EFHC1-236ENST00000637874 FAM205CA6NFA0 338 aa8.5□□□□□ -1.05
EFHC1-236ENST00000637874 ERICH6Q7L0X2 663 aa8.5□□□□□ -1.05
EFHC1-236ENST00000637874 TRPC6Q9Y210 931 aa8.5□□□□□ -1.05
EFHC1-236ENST00000637874 NKX1-1Q15270 411 aaPredicted RBP8.48□□□□□ -1.05
EFHC1-236ENST00000637874 RNF25Q96BH1 459 aaPredicted RBP8.48□□□□□ -1.05
EFHC1-236ENST00000637874 TMEM132AQ24JP5 1023 aa8.47□□□□□ -1.05
EFHC1-236ENST00000637874 TTLL13PA6NNM8 815 aa8.46□□□□□ -1.06
EFHC1-236ENST00000637874 DAXXQ9UER7 740 aaPredicted RBP8.46□□□□□ -1.06
EFHC1-236ENST00000637874 GTPBP6O43824 516 aaPredicted RBP8.45□□□□□ -1.06
EFHC1-236ENST00000637874 MYT1LQ9UL68 1186 aa8.45□□□□□ -1.06
EFHC1-236ENST00000637874 GSE1Q14687 1217 aa8.44□□□□□ -1.06
EFHC1-236ENST00000637874 KIF12Q96FN5 646 aa8.44□□□□□ -1.06
EFHC1-236ENST00000637874 MNX1P50219 401 aaPredicted RBP8.43□□□□□ -1.06
EFHC1-236ENST00000637874 C14orf37Q86TY3 774 aa8.43□□□□□ -1.06
EFHC1-236ENST00000637874 RIOK3O14730 519 aaKnown RBP8.42□□□□□ -1.06
EFHC1-236ENST00000637874 TRIM35Q9UPQ4 493 aa8.42□□□□□ -1.06
EFHC1-236ENST00000637874 CCDC61Q9Y6R9 512 aa8.41□□□□□ -1.06
EFHC1-236ENST00000637874 STK25O00506 426 aa8.4□□□□□ -1.06
EFHC1-236ENST00000637874 TSPYL2Q9H2G4 693 aaPredicted RBP8.4□□□□□ -1.06
EFHC1-236ENST00000637874 PLCG2P16885 1265 aa8.39□□□□□ -1.07
EFHC1-236ENST00000637874 DCAF8Q5TAQ9 597 aa8.39□□□□□ -1.07
EFHC1-236ENST00000637874 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.38□□□□□ -1.07
EFHC1-236ENST00000637874 HOMEZQ8IX15 550 aa8.37□□□□□ -1.07
EFHC1-236ENST00000637874 VGFO15240 615 aaPredicted RBP8.34□□□□□ -1.07
EFHC1-236ENST00000637874 NUBP1P53384 320 aa8.34□□□□□ -1.07
EFHC1-236ENST00000637874 P3H3Q8IVL6 736 aa8.33□□□□□ -1.08
EFHC1-236ENST00000637874 MAP3K13O43283 966 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms