RNA–Protein interactions for RNA: ENST00000637749.1

LINC01958-201, Transcript of long intergenic non-protein coding RNA 1958, humanhuman

TSL 5 BASIC

Gene LINC01958, Length 1,941 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01958-201ENST00000637749 ZMYND15Q9H091 742 aa10.34□□□□□ -0.75
LINC01958-201ENST00000637749 ZBTB7CA1YPR0 619 aa10.33□□□□□ -0.76
LINC01958-201ENST00000637749 PUS7Q96PZ0 661 aaKnown RBP10.29□□□□□ -0.76
LINC01958-201ENST00000637749 BCL11AQ9H165 835 aa10.29□□□□□ -0.76
LINC01958-201ENST00000637749 ARID3CA6NKF2 412 aa10.28□□□□□ -0.76
LINC01958-201ENST00000637749 RSPH6AQ9H0K4 717 aa10.28□□□□□ -0.76
LINC01958-201ENST00000637749 SLC4A2P04920 1241 aa10.27□□□□□ -0.76
LINC01958-201ENST00000637749 ATXN8OSP0DMR3 200 aa10.27□□□□□ -0.76
LINC01958-201ENST00000637749 BRD2P25440 801 aaKnown RBP10.27□□□□□ -0.76
LINC01958-201ENST00000637749 RGL2O15211 777 aa10.26□□□□□ -0.77
LINC01958-201ENST00000637749 DNAJC5BQ9UF47 199 aa10.26□□□□□ -0.77
LINC01958-201ENST00000637749 MAPK8IP2Q13387 824 aaPredicted RBP10.24□□□□□ -0.77
LINC01958-201ENST00000637749 RGS22Q8NE09 1264 aa10.24□□□□□ -0.77
LINC01958-201ENST00000637749 BICRAQ9NZM4 1560 aa10.24□□□□□ -0.77
LINC01958-201ENST00000637749 NEUROD2Q15784 382 aa10.21□□□□□ -0.77
LINC01958-201ENST00000637749 PDE4CQ08493 712 aa10.21□□□□□ -0.78
LINC01958-201ENST00000637749 ECM2O94769 699 aaPredicted RBP10.19□□□□□ -0.78
LINC01958-201ENST00000637749 HMGB1P09429 215 aaKnown RBP10.19□□□□□ -0.78
LINC01958-201ENST00000637749 KCTD17Q8N5Z5 321 aa10.19□□□□□ -0.78
LINC01958-201ENST00000637749 MTMR7Q9Y216 660 aa10.19□□□□□ -0.78
LINC01958-201ENST00000637749 RAD21O60216 631 aa10.19□□□□□ -0.78
LINC01958-201ENST00000637749 FAM9AQ8IZU1 332 aaPredicted RBP10.19□□□□□ -0.78
LINC01958-201ENST00000637749 DMRT2Q9Y5R5 561 aa10.18□□□□□ -0.78
LINC01958-201ENST00000637749 FOXD4L5Q5VV16 416 aaPredicted RBP10.17□□□□□ -0.78
LINC01958-201ENST00000637749 FOXD4L4Q8WXT5 416 aaPredicted RBP10.17□□□□□ -0.78
LINC01958-201ENST00000637749 BAZ1AQ9NRL2 1556 aaPredicted RBP10.16□□□□□ -0.78
LINC01958-201ENST00000637749 RSF1Q96T23 1441 aaPredicted RBP10.13□□□□□ -0.79
LINC01958-201ENST00000637749 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.13□□□□□ -0.79
LINC01958-201ENST00000637749 ATF5Q9Y2D1 282 aaPredicted RBP10.13□□□□□ -0.79
LINC01958-201ENST00000637749 LMOD2Q6P5Q4 547 aa10.12□□□□□ -0.79
LINC01958-201ENST00000637749 SMARCA4P51532 1647 aa10.1□□□□□ -0.79
LINC01958-201ENST00000637749 APBB1O00213 710 aa10.1□□□□□ -0.79
LINC01958-201ENST00000637749 RBM25P49756 843 aaKnown RBP10.1□□□□□ -0.79
LINC01958-201ENST00000637749 CECR2Q9BXF3 1484 aa10.1□□□□□ -0.79
LINC01958-201ENST00000637749 CHGAP10645 457 aaKnown RBP10.09□□□□□ -0.79
LINC01958-201ENST00000637749 ZNF692Q9BU19 519 aaPredicted RBP10.09□□□□□ -0.79
LINC01958-201ENST00000637749 MROH2BQ7Z745 1585 aa10.09□□□□□ -0.79
LINC01958-201ENST00000637749 TAF7LQ5H9L4 462 aa10.07□□□□□ -0.8
LINC01958-201ENST00000637749 POLR3GLQ9BT43 218 aa10.06□□□□□ -0.8
LINC01958-201ENST00000637749 SLC24A3Q9HC58 644 aa10.05□□□□□ -0.8
LINC01958-201ENST00000637749 POTEHQ6S545 545 aa10.05□□□□□ -0.8
LINC01958-201ENST00000637749 PEG3Q9GZU2 1588 aa10.04□□□□□ -0.8
LINC01958-201ENST00000637749 MYCNP04198 464 aaPredicted RBP10.01□□□□□ -0.81
LINC01958-201ENST00000637749 WIZO95785 1651 aa10.01□□□□□ -0.81
LINC01958-201ENST00000637749 BCL11BQ9C0K0 894 aaPredicted RBP10□□□□□ -0.81
LINC01958-201ENST00000637749 PABPN1Q86U42 306 aaKnown RBP eCLIP9.99□□□□□ -0.81
LINC01958-201ENST00000637749 PROM2Q8N271 834 aa9.99□□□□□ -0.81
LINC01958-201ENST00000637749 FAM177A1Q8N128 213 aaPredicted RBP9.97□□□□□ -0.81
LINC01958-201ENST00000637749 CCDC82Q8N4S0 544 aa9.97□□□□□ -0.81
LINC01958-201ENST00000637749 RNF39Q9H2S5 420 aa9.97□□□□□ -0.81
LINC01958-201ENST00000637749 TOP2AP11388 1531 aaKnown RBP9.97□□□□□ -0.81
LINC01958-201ENST00000637749 AEBP1Q8IUX7 1158 aa9.96□□□□□ -0.81
LINC01958-201ENST00000637749 ZC3H15Q8WU90 426 aaKnown RBP9.95□□□□□ -0.82
LINC01958-201ENST00000637749 SMARCA2P51531 1590 aa9.95□□□□□ -0.82
LINC01958-201ENST00000637749 MFAP1P55081 439 aaKnown RBP9.95□□□□□ -0.82
LINC01958-201ENST00000637749 IRX6P78412 446 aaPredicted RBP9.95□□□□□ -0.82
LINC01958-201ENST00000637749 MKRN3Q13064 507 aaKnown RBP9.95□□□□□ -0.82
LINC01958-201ENST00000637749 BRPF3Q9ULD4 1205 aa9.95□□□□□ -0.82
LINC01958-201ENST00000637749 USP35Q9P2H5 1018 aa9.94□□□□□ -0.82
LINC01958-201ENST00000637749 EIF4G1Q04637 1599 aaKnown RBP9.93□□□□□ -0.82
LINC01958-201ENST00000637749 NKX1-1Q15270 411 aaPredicted RBP9.93□□□□□ -0.82
LINC01958-201ENST00000637749 SPDYE4A6NLX3 237 aa9.91□□□□□ -0.82
LINC01958-201ENST00000637749 CWC22Q9HCG8 908 aaKnown RBP9.9□□□□□ -0.82
LINC01958-201ENST00000637749 ZFP91Q96JP5 570 aaPredicted RBP9.9□□□□□ -0.83
LINC01958-201ENST00000637749 GPBP1L1Q9HC44 474 aaPredicted RBP9.9□□□□□ -0.83
LINC01958-201ENST00000637749 TMCO4Q5TGY1 634 aa9.89□□□□□ -0.83
LINC01958-201ENST00000637749 TRAIPQ9BWF2 469 aa9.89□□□□□ -0.83
LINC01958-201ENST00000637749 ATAD2BQ9ULI0 1458 aa9.89□□□□□ -0.83
LINC01958-201ENST00000637749 GZF1Q9H116 711 aaPredicted RBP9.88□□□□□ -0.83
LINC01958-201ENST00000637749 HMGXB3Q12766 1538 aa9.88□□□□□ -0.83
LINC01958-201ENST00000637749 TMED8Q6PL24 325 aaPredicted RBP9.88□□□□□ -0.83
LINC01958-201ENST00000637749 IL27Q8NEV9 243 aa9.88□□□□□ -0.83
LINC01958-201ENST00000637749 NEFLP07196 543 aa9.85□□□□□ -0.83
LINC01958-201ENST00000637749 BAZ1BQ9UIG0 1483 aaKnown RBP9.84□□□□□ -0.83
LINC01958-201ENST00000637749 NCAPD3P42695 1498 aa9.84□□□□□ -0.83
LINC01958-201ENST00000637749 GTPBP6O43824 516 aaPredicted RBP9.84□□□□□ -0.83
LINC01958-201ENST00000637749 SPOCK2Q92563 424 aa9.84□□□□□ -0.83
LINC01958-201ENST00000637749 ZNF592Q92610 1267 aa9.84□□□□□ -0.83
LINC01958-201ENST00000637749 CERS3Q8IU89 383 aa9.82□□□□□ -0.84
LINC01958-201ENST00000637749 KCNV2Q8TDN2 545 aa9.82□□□□□ -0.84
LINC01958-201ENST00000637749 E9PSI1 815 aa9.81□□□□□ -0.84
LINC01958-201ENST00000637749 CCDC88BA6NC98 1476 aa9.79□□□□□ -0.84
LINC01958-201ENST00000637749 C1QBPQ07021 282 aaKnown RBP9.79□□□□□ -0.84
LINC01958-201ENST00000637749 IRF5Q13568 498 aa9.78□□□□□ -0.84
LINC01958-201ENST00000637749 HS6ST3Q8IZP7 471 aa9.78□□□□□ -0.84
LINC01958-201ENST00000637749 CCDC136Q96JN2 1154 aa9.78□□□□□ -0.84
LINC01958-201ENST00000637749 BCCIPQ9P287 314 aaKnown RBP eCLIP9.78□□□□□ -0.84
LINC01958-201ENST00000637749 PKNOX2Q96KN3 472 aa9.76□□□□□ -0.85
LINC01958-201ENST00000637749 CC2D2AQ9P2K1 1620 aa9.76□□□□□ -0.85
LINC01958-201ENST00000637749 PPM1GO15355 546 aaPredicted RBP9.76□□□□□ -0.85
LINC01958-201ENST00000637749 TICAM2Q86XR7 235 aa9.75□□□□□ -0.85
LINC01958-201ENST00000637749 SCAF1Q9H7N4 1312 aaKnown RBP9.74□□□□□ -0.85
LINC01958-201ENST00000637749 FGD1P98174 961 aa9.74□□□□□ -0.85
LINC01958-201ENST00000637749 CLUAP1Q96AJ1 413 aa9.74□□□□□ -0.85
LINC01958-201ENST00000637749 ZNF316A6NFI3 1004 aaPredicted RBP9.74□□□□□ -0.85
LINC01958-201ENST00000637749 DCAF8L1A6NGE4 600 aa9.74□□□□□ -0.85
LINC01958-201ENST00000637749 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.74□□□□□ -0.85
LINC01958-201ENST00000637749 RSPH4AQ5TD94 716 aa9.72□□□□□ -0.85
LINC01958-201ENST00000637749 RNF216Q9NWF9 866 aaPredicted RBP9.72□□□□□ -0.85
LINC01958-201ENST00000637749 WDR70Q9NW82 654 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms