RNA–Protein interactions for RNA: ENST00000637628.1

CHRNA4-220, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-220ENST00000637628 ZNF219Q9P2Y4 722 aaPredicted RBP5.56□□□□□ -1.52
CHRNA4-220ENST00000637628 SHROOM4Q9ULL8 1493 aa5.54□□□□□ -1.52
CHRNA4-220ENST00000637628 CIZ1Q9ULV3 898 aaPredicted RBP5.54□□□□□ -1.52
CHRNA4-220ENST00000637628 SLC24A3Q9HC58 644 aa5.52□□□□□ -1.53
CHRNA4-220ENST00000637628 MKRN4PQ13434 485 aaPredicted RBP5.51□□□□□ -1.53
CHRNA4-220ENST00000637628 HMGB1P09429 215 aaKnown RBP5.5□□□□□ -1.53
CHRNA4-220ENST00000637628 CDK11BP21127 795 aaKnown RBP5.5□□□□□ -1.53
CHRNA4-220ENST00000637628 PLCD3Q8N3E9 789 aa5.5□□□□□ -1.53
CHRNA4-220ENST00000637628 NECTIN2Q92692 538 aa5.5□□□□□ -1.53
CHRNA4-220ENST00000637628 C1orf115Q9H7X2 142 aa5.5□□□□□ -1.53
CHRNA4-220ENST00000637628 CDK11AQ9UQ88 783 aaPredicted RBP5.5□□□□□ -1.53
CHRNA4-220ENST00000637628 DMRT2Q9Y5R5 561 aa5.5□□□□□ -1.53
CHRNA4-220ENST00000637628 GTPBP6O43824 516 aaPredicted RBP5.49□□□□□ -1.53
CHRNA4-220ENST00000637628 ZC3H15Q8WU90 426 aaKnown RBP5.49□□□□□ -1.53
CHRNA4-220ENST00000637628 ARID3CA6NKF2 412 aa5.48□□□□□ -1.53
CHRNA4-220ENST00000637628 NKX1-1Q15270 411 aaPredicted RBP5.48□□□□□ -1.53
CHRNA4-220ENST00000637628 APBB1O00213 710 aa5.47□□□□□ -1.53
CHRNA4-220ENST00000637628 KCTD17Q8N5Z5 321 aa5.47□□□□□ -1.53
CHRNA4-220ENST00000637628 IGSF3O75054 1194 aa5.46□□□□□ -1.54
CHRNA4-220ENST00000637628 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.46□□□□□ -1.54
CHRNA4-220ENST00000637628 MSH5O43196 834 aa5.45□□□□□ -1.54
CHRNA4-220ENST00000637628 RAD21O60216 631 aa5.45□□□□□ -1.54
CHRNA4-220ENST00000637628 KCNV2Q8TDN2 545 aa5.45□□□□□ -1.54
CHRNA4-220ENST00000637628 TRIM41Q8WV44 630 aa5.45□□□□□ -1.54
CHRNA4-220ENST00000637628 WDR70Q9NW82 654 aa5.45□□□□□ -1.54
CHRNA4-220ENST00000637628 HSP90B1P14625 803 aaKnown RBP5.44□□□□□ -1.54
CHRNA4-220ENST00000637628 STAG3Q9UJ98 1225 aa5.43□□□□□ -1.54
CHRNA4-220ENST00000637628 MIER1Q8N108 512 aa5.41□□□□□ -1.54
CHRNA4-220ENST00000637628 IL27Q8NEV9 243 aa5.41□□□□□ -1.54
CHRNA4-220ENST00000637628 U3KPZ7 1027 aaPredicted RBP5.41□□□□□ -1.54
CHRNA4-220ENST00000637628 RBM25P49756 843 aaKnown RBP5.39□□□□□ -1.55
CHRNA4-220ENST00000637628 AEBP1Q8IUX7 1158 aa5.39□□□□□ -1.55
CHRNA4-220ENST00000637628 GPBP1L1Q9HC44 474 aaPredicted RBP5.39□□□□□ -1.55
CHRNA4-220ENST00000637628 RYDENQ9NUL5 291 aaKnown RBP5.39□□□□□ -1.55
CHRNA4-220ENST00000637628 STK25O00506 426 aa5.38□□□□□ -1.55
CHRNA4-220ENST00000637628 CCDC82Q8N4S0 544 aa5.38□□□□□ -1.55
CHRNA4-220ENST00000637628 RNF25Q96BH1 459 aaPredicted RBP5.38□□□□□ -1.55
CHRNA4-220ENST00000637628 MTMR7Q9Y216 660 aa5.38□□□□□ -1.55
CHRNA4-220ENST00000637628 MKRN3Q13064 507 aaKnown RBP5.37□□□□□ -1.55
CHRNA4-220ENST00000637628 TMCO4Q5TGY1 634 aa5.37□□□□□ -1.55
CHRNA4-220ENST00000637628 RGS22Q8NE09 1264 aa5.37□□□□□ -1.55
CHRNA4-220ENST00000637628 ZMYND10O75800 440 aa5.36□□□□□ -1.55
CHRNA4-220ENST00000637628 PUS7Q96PZ0 661 aaKnown RBP5.36□□□□□ -1.55
CHRNA4-220ENST00000637628 ZBTB47Q9UFB7 747 aaPredicted RBP5.36□□□□□ -1.55
CHRNA4-220ENST00000637628 RIOK3O14730 519 aaKnown RBP5.35□□□□□ -1.55
CHRNA4-220ENST00000637628 PLEKHG5O94827 1062 aa5.35□□□□□ -1.55
CHRNA4-220ENST00000637628 TRAIPQ9BWF2 469 aa5.35□□□□□ -1.55
CHRNA4-220ENST00000637628 DCAF8L1A6NGE4 600 aa5.34□□□□□ -1.55
CHRNA4-220ENST00000637628 FOXD4L5Q5VV16 416 aaPredicted RBP5.34□□□□□ -1.55
CHRNA4-220ENST00000637628 FOXD4L4Q8WXT5 416 aaPredicted RBP5.34□□□□□ -1.55
CHRNA4-220ENST00000637628 CHMP4AQ9BY43 222 aa5.34□□□□□ -1.55
CHRNA4-220ENST00000637628 MFAP1P55081 439 aaKnown RBP5.33□□□□□ -1.56
CHRNA4-220ENST00000637628 FLIIQ13045 1269 aa5.33□□□□□ -1.56
CHRNA4-220ENST00000637628 KDM4CQ9H3R0 1056 aa5.33□□□□□ -1.56
CHRNA4-220ENST00000637628 ZNF428Q96B54 188 aa5.32□□□□□ -1.56
CHRNA4-220ENST00000637628 AK7Q96M32 723 aa5.32□□□□□ -1.56
CHRNA4-220ENST00000637628 TESPA1A2RU30 521 aaPredicted RBP5.31□□□□□ -1.56
CHRNA4-220ENST00000637628 SEMA3EO15041 775 aa5.31□□□□□ -1.56
CHRNA4-220ENST00000637628 VGFO15240 615 aaPredicted RBP5.31□□□□□ -1.56
CHRNA4-220ENST00000637628 POLA2Q14181 598 aa5.31□□□□□ -1.56
CHRNA4-220ENST00000637628 GSE1Q14687 1217 aa5.31□□□□□ -1.56
CHRNA4-220ENST00000637628 ARHGEF1Q92888 912 aaKnown RBP5.31□□□□□ -1.56
CHRNA4-220ENST00000637628 GZF1Q9H116 711 aaPredicted RBP5.31□□□□□ -1.56
CHRNA4-220ENST00000637628 STK24Q9Y6E0 443 aa5.31□□□□□ -1.56
CHRNA4-220ENST00000637628 E9PSI1 815 aa5.3□□□□□ -1.56
CHRNA4-220ENST00000637628 BARGINQ6ZT62 677 aa5.3□□□□□ -1.56
CHRNA4-220ENST00000637628 USP35Q9P2H5 1018 aa5.3□□□□□ -1.56
CHRNA4-220ENST00000637628 TRAK2O60296 914 aa5.29□□□□□ -1.56
CHRNA4-220ENST00000637628 SMYD5Q6GMV2 418 aa5.29□□□□□ -1.56
CHRNA4-220ENST00000637628 CADPS2Q86UW7 1296 aa5.29□□□□□ -1.56
CHRNA4-220ENST00000637628 KRI1Q8N9T8 703 aaKnown RBP5.29□□□□□ -1.56
CHRNA4-220ENST00000637628 BCL11BQ9C0K0 894 aaPredicted RBP5.28□□□□□ -1.56
CHRNA4-220ENST00000637628 ZNF316A6NFI3 1004 aaPredicted RBP5.27□□□□□ -1.57
CHRNA4-220ENST00000637628 A6NJR5 290 aa5.27□□□□□ -1.57
CHRNA4-220ENST00000637628 FBXW7Q969H0 707 aa5.27□□□□□ -1.57
CHRNA4-220ENST00000637628 CLUAP1Q96AJ1 413 aa5.27□□□□□ -1.57
CHRNA4-220ENST00000637628 CCDC97Q96F63 343 aaPredicted RBP5.26□□□□□ -1.57
CHRNA4-220ENST00000637628 PDE4DQ08499 809 aa5.25□□□□□ -1.57
CHRNA4-220ENST00000637628 E2F4Q16254 413 aa5.24□□□□□ -1.57
CHRNA4-220ENST00000637628 DCAF8Q5TAQ9 597 aa5.24□□□□□ -1.57
CHRNA4-220ENST00000637628 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.23□□□□□ -1.57
CHRNA4-220ENST00000637628 RETREG2Q8NC44 543 aa5.23□□□□□ -1.57
CHRNA4-220ENST00000637628 ZFP91Q96JP5 570 aaPredicted RBP5.23□□□□□ -1.57
CHRNA4-220ENST00000637628 POLR3GLQ9BT43 218 aa5.23□□□□□ -1.57
CHRNA4-220ENST00000637628 SERPINA10Q9UK55 444 aa5.23□□□□□ -1.57
CHRNA4-220ENST00000637628 MYT1LQ9UL68 1186 aa5.23□□□□□ -1.57
CHRNA4-220ENST00000637628 TRIM66O15016 1216 aa5.22□□□□□ -1.57
CHRNA4-220ENST00000637628 GPIHBP1Q8IV16 184 aa5.22□□□□□ -1.57
CHRNA4-220ENST00000637628 ZNF692Q9BU19 519 aaPredicted RBP5.22□□□□□ -1.57
CHRNA4-220ENST00000637628 FAM117AQ9C073 453 aa5.22□□□□□ -1.57
CHRNA4-220ENST00000637628 ZNF777Q9ULD5 760 aaPredicted RBP5.22□□□□□ -1.57
CHRNA4-220ENST00000637628 RSPH4AQ5TD94 716 aa5.21□□□□□ -1.58
CHRNA4-220ENST00000637628 DDRGK1Q96HY6 314 aa5.2□□□□□ -1.58
CHRNA4-220ENST00000637628 SGIP1Q9BQI5 828 aa5.2□□□□□ -1.58
CHRNA4-220ENST00000637628 ONECUT3O60422 494 aaPredicted RBP5.19□□□□□ -1.58
CHRNA4-220ENST00000637628 IRF5Q13568 498 aa5.19□□□□□ -1.58
CHRNA4-220ENST00000637628 PROSER2Q86WR7 435 aaPredicted RBP5.19□□□□□ -1.58
CHRNA4-220ENST00000637628 ZBTB12Q9Y330 459 aaPredicted RBP5.19□□□□□ -1.58
CHRNA4-220ENST00000637628 PABPN1Q86U42 306 aaKnown RBP eCLIP5.18□□□□□ -1.58
CHRNA4-220ENST00000637628 FAM177A1Q8N128 213 aaPredicted RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms