RNA–Protein interactions for RNA: ENST00000637490.1

SYNGAP1-221, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 132 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-221ENST00000637490 IPO4Q8TEX9 1081 aaKnown RBP3.58□□□□□ -1.84
SYNGAP1-221ENST00000637490 UBTFP17480 764 aaKnown RBP3.57□□□□□ -1.84
SYNGAP1-221ENST00000637490 NAP1L2Q9ULW6 460 aaPredicted RBP3.57□□□□□ -1.84
SYNGAP1-221ENST00000637490 ARID4BQ4LE39 1312 aaPredicted RBP3.56□□□□□ -1.84
SYNGAP1-221ENST00000637490 CHRM1P11229 460 aaPredicted RBP3.56□□□□□ -1.84
SYNGAP1-221ENST00000637490 ZBTB4Q9P1Z0 1013 aaPredicted RBP3.56□□□□□ -1.84
SYNGAP1-221ENST00000637490 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.56□□□□□ -1.84
SYNGAP1-221ENST00000637490 FANCIQ9NVI1 1328 aa3.55□□□□□ -1.84
SYNGAP1-221ENST00000637490 IGSF3O75054 1194 aa3.54□□□□□ -1.84
SYNGAP1-221ENST00000637490 NPM1P06748 294 aaKnown RBP eCLIP3.54□□□□□ -1.84
SYNGAP1-221ENST00000637490 CCER1Q8TC90 406 aaPredicted RBP3.54□□□□□ -1.84
SYNGAP1-221ENST00000637490 RRP9O43818 475 aaKnown RBP3.53□□□□□ -1.84
SYNGAP1-221ENST00000637490 NEFMP07197 916 aa3.53□□□□□ -1.84
SYNGAP1-221ENST00000637490 SETQ01105 290 aaPredicted RBP3.53□□□□□ -1.84
SYNGAP1-221ENST00000637490 RTL5Q5HYW3 569 aaPredicted RBP3.53□□□□□ -1.84
SYNGAP1-221ENST00000637490 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.53□□□□□ -1.84
SYNGAP1-221ENST00000637490 FTSJ3Q8IY81 847 aaKnown RBP3.53□□□□□ -1.84
SYNGAP1-221ENST00000637490 C11orf95C9JLR9 678 aaPredicted RBP3.52□□□□□ -1.85
SYNGAP1-221ENST00000637490 VGFO15240 615 aaPredicted RBP3.52□□□□□ -1.85
SYNGAP1-221ENST00000637490 PTMAP06454 111 aaKnown RBP3.52□□□□□ -1.85
SYNGAP1-221ENST00000637490 PTMSP20962 102 aa3.52□□□□□ -1.85
SYNGAP1-221ENST00000637490 CNGB1Q14028 1251 aaPredicted RBP3.52□□□□□ -1.85
SYNGAP1-221ENST00000637490 ZFP91Q96JP5 570 aaPredicted RBP3.52□□□□□ -1.85
SYNGAP1-221ENST00000637490 PSMD1Q99460 953 aa3.52□□□□□ -1.85
SYNGAP1-221ENST00000637490 MCCP23508 829 aa3.51□□□□□ -1.85
SYNGAP1-221ENST00000637490 CANXP27824 592 aaKnown RBP3.51□□□□□ -1.85
SYNGAP1-221ENST00000637490 GRIPAP1Q4V328 841 aa3.51□□□□□ -1.85
SYNGAP1-221ENST00000637490 PLCD4Q9BRC7 762 aa3.51□□□□□ -1.85
SYNGAP1-221ENST00000637490 RNF216Q9NWF9 866 aaPredicted RBP3.51□□□□□ -1.85
SYNGAP1-221ENST00000637490 CNPY4Q8N129 248 aa3.5□□□□□ -1.85
SYNGAP1-221ENST00000637490 BBXQ8WY36 941 aaPredicted RBP3.5□□□□□ -1.85
SYNGAP1-221ENST00000637490 ZNF592Q92610 1267 aa3.5□□□□□ -1.85
SYNGAP1-221ENST00000637490 SUPT16HQ9Y5B9 1047 aaKnown RBP3.5□□□□□ -1.85
SYNGAP1-221ENST00000637490 CALD1Q05682 793 aaKnown RBP3.49□□□□□ -1.85
SYNGAP1-221ENST00000637490 DIEXFQ68CQ4 756 aaKnown RBP3.49□□□□□ -1.85
SYNGAP1-221ENST00000637490 CC2D2BQ6DHV5 1058 aa3.49□□□□□ -1.85
SYNGAP1-221ENST00000637490 ANP32BQ92688 251 aaKnown RBP3.49□□□□□ -1.85
SYNGAP1-221ENST00000637490 SECISBP2LQ93073 1101 aaKnown RBP3.49□□□□□ -1.85
SYNGAP1-221ENST00000637490 CENPJQ9HC77 1338 aaPredicted RBP3.48□□□□□ -1.85
SYNGAP1-221ENST00000637490 CLGNO14967 610 aa3.48□□□□□ -1.85
SYNGAP1-221ENST00000637490 GTF2E1P29083 439 aaPredicted RBP3.48□□□□□ -1.85
SYNGAP1-221ENST00000637490 IRX6P78412 446 aaPredicted RBP3.48□□□□□ -1.85
SYNGAP1-221ENST00000637490 CHMP4BQ9H444 224 aaKnown RBP3.48□□□□□ -1.85
SYNGAP1-221ENST00000637490 BRPF3Q9ULD4 1205 aa3.48□□□□□ -1.85
SYNGAP1-221ENST00000637490 PPP6R1Q9UPN7 881 aa3.48□□□□□ -1.85
SYNGAP1-221ENST00000637490 RBM19Q9Y4C8 960 aaKnown RBP3.48□□□□□ -1.85
SYNGAP1-221ENST00000637490 ZBTB7CA1YPR0 619 aa3.47□□□□□ -1.85
SYNGAP1-221ENST00000637490 PPM1GO15355 546 aaPredicted RBP3.47□□□□□ -1.85
SYNGAP1-221ENST00000637490 HSP90AA2PQ14568 343 aaPredicted RBP3.47□□□□□ -1.85
SYNGAP1-221ENST00000637490 AXDND1Q5T1B0 1012 aaPredicted RBP3.47□□□□□ -1.85
SYNGAP1-221ENST00000637490 IL27Q8NEV9 243 aa3.47□□□□□ -1.85
SYNGAP1-221ENST00000637490 SLC4A1APQ9BWU0 796 aaKnown RBP3.47□□□□□ -1.85
SYNGAP1-221ENST00000637490 MYO15BQ96JP2 1530 aa3.47□□□□□ -1.85
SYNGAP1-221ENST00000637490 PHF14O94880 888 aa3.46□□□□□ -1.86
SYNGAP1-221ENST00000637490 WWC1Q8IX03 1113 aa3.46□□□□□ -1.86
SYNGAP1-221ENST00000637490 ZNF622Q969S3 477 aaKnown RBP eCLIP3.46□□□□□ -1.86
SYNGAP1-221ENST00000637490 STAC3Q96MF2 364 aa3.46□□□□□ -1.86
SYNGAP1-221ENST00000637490 CFAP44Q96MT7 982 aa3.46□□□□□ -1.86
SYNGAP1-221ENST00000637490 MSH5O43196 834 aa3.45□□□□□ -1.86
SYNGAP1-221ENST00000637490 ANP32AP39687 249 aaKnown RBP3.45□□□□□ -1.86
SYNGAP1-221ENST00000637490 FAM193AP78312 1265 aa3.45□□□□□ -1.86
SYNGAP1-221ENST00000637490 DNAJC2Q99543 621 aaKnown RBP3.45□□□□□ -1.86
SYNGAP1-221ENST00000637490 KDM2AQ9Y2K7 1162 aa3.45□□□□□ -1.86
SYNGAP1-221ENST00000637490 MAFGO15525 162 aa3.44□□□□□ -1.86
SYNGAP1-221ENST00000637490 MMP14P50281 582 aa3.44□□□□□ -1.86
SYNGAP1-221ENST00000637490 CERS3Q8IU89 383 aa3.44□□□□□ -1.86
SYNGAP1-221ENST00000637490 FAM43AQ8N2R8 423 aa3.44□□□□□ -1.86
SYNGAP1-221ENST00000637490 TRIM44Q96DX7 344 aaPredicted RBP3.44□□□□□ -1.86
SYNGAP1-221ENST00000637490 PRDM10Q9NQV6 1147 aa3.44□□□□□ -1.86
SYNGAP1-221ENST00000637490 PRDM4Q9UKN5 801 aa3.44□□□□□ -1.86
SYNGAP1-221ENST00000637490 ANAPC15P60006 121 aa3.43□□□□□ -1.86
SYNGAP1-221ENST00000637490 TMED8Q6PL24 325 aaPredicted RBP3.43□□□□□ -1.86
SYNGAP1-221ENST00000637490 GPATCH11Q8N954 259 aa3.43□□□□□ -1.86
SYNGAP1-221ENST00000637490 CEP120Q8N960 986 aa3.43□□□□□ -1.86
SYNGAP1-221ENST00000637490 USP35Q9P2H5 1018 aa3.43□□□□□ -1.86
SYNGAP1-221ENST00000637490 WASHC2CQ9Y4E1 1318 aa3.43□□□□□ -1.86
SYNGAP1-221ENST00000637490 HSP90AA1P07900 732 aaKnown RBP3.42□□□□□ -1.86
SYNGAP1-221ENST00000637490 RGS22Q8NE09 1264 aa3.42□□□□□ -1.86
SYNGAP1-221ENST00000637490 PRDM16Q9HAZ2 1276 aa3.42□□□□□ -1.86
SYNGAP1-221ENST00000637490 IRX3P78415 501 aaPredicted RBP3.41□□□□□ -1.86
SYNGAP1-221ENST00000637490 KCNG1Q9UIX4 513 aa3.41□□□□□ -1.86
SYNGAP1-221ENST00000637490 PATL2C9JE40 543 aaKnown RBP3.4□□□□□ -1.87
SYNGAP1-221ENST00000637490 TAF3Q5VWG9 929 aa3.4□□□□□ -1.87
SYNGAP1-221ENST00000637490 TRIM41Q8WV44 630 aa3.4□□□□□ -1.87
SYNGAP1-221ENST00000637490 CWC22Q9HCG8 908 aaKnown RBP3.4□□□□□ -1.87
SYNGAP1-221ENST00000637490 WASHC2AQ641Q2 1341 aa3.4□□□□□ -1.87
SYNGAP1-221ENST00000637490 ZNF316A6NFI3 1004 aaPredicted RBP3.39□□□□□ -1.87
SYNGAP1-221ENST00000637490 FBLN2P98095 1184 aa3.39□□□□□ -1.87
SYNGAP1-221ENST00000637490 NBPF20Q3BBV1 942 aa3.39□□□□□ -1.87
SYNGAP1-221ENST00000637490 SMAP1Q8IYB5 467 aaPredicted RBP3.39□□□□□ -1.87
SYNGAP1-221ENST00000637490 ZNF692Q9BU19 519 aaPredicted RBP3.39□□□□□ -1.87
SYNGAP1-221ENST00000637490 PDCL3Q9H2J4 239 aa3.39□□□□□ -1.87
SYNGAP1-221ENST00000637490 HDAC5Q9UQL6 1122 aa3.39□□□□□ -1.87
SYNGAP1-221ENST00000637490 NOP58Q9Y2X3 529 aaKnown RBP3.39□□□□□ -1.87
SYNGAP1-221ENST00000637490 LAS1LQ9Y4W2 734 aaKnown RBP3.39□□□□□ -1.87
SYNGAP1-221ENST00000637490 TTC36A6NLP5 189 aa3.38□□□□□ -1.87
SYNGAP1-221ENST00000637490 OS9Q13438 667 aaPredicted RBP3.38□□□□□ -1.87
SYNGAP1-221ENST00000637490 CCDC27Q2M243 656 aa3.38□□□□□ -1.87
SYNGAP1-221ENST00000637490 HSP90AB4PQ58FF6 505 aa3.38□□□□□ -1.87
SYNGAP1-221ENST00000637490 UTP14CQ5TAP6 766 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms