RNA–Protein interactions for RNA: ENST00000637354.1

PTPRD-215, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5

Gene PTPRD, Length 891 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-215ENST00000637354 SLC39A7Q92504 469 aa12.48□□□□□ -0.41
PTPRD-215ENST00000637354 ATMINO43313 823 aaPredicted RBP12.46□□□□□ -0.41
PTPRD-215ENST00000637354 ZBTB47Q9UFB7 747 aaPredicted RBP12.46□□□□□ -0.41
PTPRD-215ENST00000637354 C7P10643 843 aa12.45□□□□□ -0.42
PTPRD-215ENST00000637354 PELP1Q8IZL8 1130 aaKnown RBP12.45□□□□□ -0.42
PTPRD-215ENST00000637354 KIF12Q96FN5 646 aa12.44□□□□□ -0.42
PTPRD-215ENST00000637354 OTUD5Q96G74 571 aa12.43□□□□□ -0.42
PTPRD-215ENST00000637354 METRNQ9UJH8 293 aa12.43□□□□□ -0.42
PTPRD-215ENST00000637354 PLCD3Q8N3E9 789 aa12.42□□□□□ -0.42
PTPRD-215ENST00000637354 POTEB2H3BUK9 544 aa12.41□□□□□ -0.42
PTPRD-215ENST00000637354 RASEFQ8IZ41 740 aa12.38□□□□□ -0.43
PTPRD-215ENST00000637354 TIE1P35590 1138 aa12.36□□□□□ -0.43
PTPRD-215ENST00000637354 MAMSTRQ6ZN01 415 aa12.35□□□□□ -0.43
PTPRD-215ENST00000637354 SGIP1Q9BQI5 828 aa12.35□□□□□ -0.43
PTPRD-215ENST00000637354 MAP3K13O43283 966 aa12.33□□□□□ -0.44
PTPRD-215ENST00000637354 ATN1P54259 1190 aaPredicted RBP12.33□□□□□ -0.44
PTPRD-215ENST00000637354 RTN4Q9NQC3 1192 aaKnown RBP12.33□□□□□ -0.44
PTPRD-215ENST00000637354 AMER1Q5JTC6 1135 aaPredicted RBP12.31□□□□□ -0.44
PTPRD-215ENST00000637354 BMP2KQ9NSY1 1161 aaPredicted RBP12.31□□□□□ -0.44
PTPRD-215ENST00000637354 NUBP1P53384 320 aa12.28□□□□□ -0.44
PTPRD-215ENST00000637354 FAM212AQ96EL1 285 aa12.27□□□□□ -0.45
PTPRD-215ENST00000637354 SCUBE2Q9NQ36 999 aa12.25□□□□□ -0.45
PTPRD-215ENST00000637354 FBXO3Q9UK99 471 aa12.24□□□□□ -0.45
PTPRD-215ENST00000637354 TRPC6Q9Y210 931 aa12.24□□□□□ -0.45
PTPRD-215ENST00000637354 PCDHB13Q9Y5F0 798 aa12.23□□□□□ -0.45
PTPRD-215ENST00000637354 TTLL13PA6NNM8 815 aa12.22□□□□□ -0.45
PTPRD-215ENST00000637354 POTEJP0CG39 1038 aa12.22□□□□□ -0.45
PTPRD-215ENST00000637354 IER5LQ5T953 404 aa12.21□□□□□ -0.45
PTPRD-215ENST00000637354 POTEFA5A3E0 1075 aa12.16□□□□□ -0.46
PTPRD-215ENST00000637354 POTEMA6NI47 508 aa12.16□□□□□ -0.46
PTPRD-215ENST00000637354 SEC24BO95487 1268 aa12.15□□□□□ -0.46
PTPRD-215ENST00000637354 TRIM35Q9UPQ4 493 aa12.15□□□□□ -0.46
PTPRD-215ENST00000637354 IFNL1Q8IU54 200 aa12.13□□□□□ -0.47
PTPRD-215ENST00000637354 POTEGQ6S5H5 508 aa12.11□□□□□ -0.47
PTPRD-215ENST00000637354 PCDH10Q9P2E7 1040 aa12.11□□□□□ -0.47
PTPRD-215ENST00000637354 PLSCR2Q9NRY7 297 aa12.09□□□□□ -0.47
PTPRD-215ENST00000637354 COLQQ9Y215 455 aaPredicted RBP12.08□□□□□ -0.48
PTPRD-215ENST00000637354 TMEM106CQ9BVX2 250 aa12.07□□□□□ -0.48
PTPRD-215ENST00000637354 DCAF8Q5TAQ9 597 aa12.05□□□□□ -0.48
PTPRD-215ENST00000637354 PLCG2P16885 1265 aa12.01□□□□□ -0.49
PTPRD-215ENST00000637354 VASPP50552 380 aaPredicted RBP12.01□□□□□ -0.49
PTPRD-215ENST00000637354 GSE1Q14687 1217 aa12□□□□□ -0.49
PTPRD-215ENST00000637354 PYGBP11216 843 aa11.99□□□□□ -0.49
PTPRD-215ENST00000637354 LCE2DQ5TA82 110 aaPredicted RBP11.99□□□□□ -0.49
PTPRD-215ENST00000637354 FAM163AQ96GL9 167 aaPredicted RBP11.98□□□□□ -0.49
PTPRD-215ENST00000637354 IRX5P78411 483 aaPredicted RBP11.97□□□□□ -0.49
PTPRD-215ENST00000637354 KLHL34Q8N239 644 aa11.96□□□□□ -0.49
PTPRD-215ENST00000637354 ZNF467Q7Z7K2 595 aaPredicted RBP11.95□□□□□ -0.5
PTPRD-215ENST00000637354 SLC24A1O60721 1099 aa11.93□□□□□ -0.5
PTPRD-215ENST00000637354 OCEL1Q9H607 264 aa11.93□□□□□ -0.5
PTPRD-215ENST00000637354 CHRM1P11229 460 aaPredicted RBP11.92□□□□□ -0.5
PTPRD-215ENST00000637354 SLAIN1Q8ND83 568 aa11.9□□□□□ -0.5
PTPRD-215ENST00000637354 PCDHB8Q9UN66 801 aa11.9□□□□□ -0.5
PTPRD-215ENST00000637354 GOLGA2Q08379 1002 aa11.83□□□□□ -0.52
PTPRD-215ENST00000637354 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.81□□□□□ -0.52
PTPRD-215ENST00000637354 SNPHO15079 494 aa11.8□□□□□ -0.52
PTPRD-215ENST00000637354 MKRN3Q13064 507 aaKnown RBP11.8□□□□□ -0.52
PTPRD-215ENST00000637354 SPOCK2Q92563 424 aa11.79□□□□□ -0.52
PTPRD-215ENST00000637354 ST18O60284 1047 aa11.77□□□□□ -0.53
PTPRD-215ENST00000637354 PSEN1P49768 467 aa11.77□□□□□ -0.53
PTPRD-215ENST00000637354 PDCD7Q8N8D1 485 aaKnown RBP11.77□□□□□ -0.53
PTPRD-215ENST00000637354 L3MBTL3Q96JM7 780 aaPredicted RBP11.77□□□□□ -0.53
PTPRD-215ENST00000637354 TMEM121BQ9BXQ6 578 aaPredicted RBP11.77□□□□□ -0.53
PTPRD-215ENST00000637354 PDAP1Q13442 181 aaKnown RBP11.75□□□□□ -0.53
PTPRD-215ENST00000637354 C3orf67Q6ZVT6 689 aa11.73□□□□□ -0.53
PTPRD-215ENST00000637354 IFNLR1Q8IU57 520 aaPredicted RBP11.73□□□□□ -0.53
PTPRD-215ENST00000637354 CDAN1Q8IWY9 1227 aa11.73□□□□□ -0.53
PTPRD-215ENST00000637354 ILDR1Q86SU0 546 aaPredicted RBP11.7□□□□□ -0.54
PTPRD-215ENST00000637354 TRIM41Q8WV44 630 aa11.7□□□□□ -0.54
PTPRD-215ENST00000637354 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.7□□□□□ -0.54
PTPRD-215ENST00000637354 CIZ1Q9ULV3 898 aaPredicted RBP11.69□□□□□ -0.54
PTPRD-215ENST00000637354 CABP2Q9NPB3 220 aa11.6□□□□□ -0.55
PTPRD-215ENST00000637354 G3V3G9 751 aa11.59□□□□□ -0.55
PTPRD-215ENST00000637354 DCAF8L2P0C7V8 631 aa11.56□□□□□ -0.56
PTPRD-215ENST00000637354 BOLA1Q9Y3E2 137 aa11.55□□□□□ -0.56
PTPRD-215ENST00000637354 MARVELD3Q96A59 401 aa11.52□□□□□ -0.57
PTPRD-215ENST00000637354 EMP3P54852 163 aa11.51□□□□□ -0.57
PTPRD-215ENST00000637354 DPY19L2Q6NUT2 758 aa11.5□□□□□ -0.57
PTPRD-215ENST00000637354 PKD2Q13563 968 aa11.47□□□□□ -0.57
PTPRD-215ENST00000637354 SPNS2Q8IVW8 549 aa11.45□□□□□ -0.58
PTPRD-215ENST00000637354 RIOK3O14730 519 aaKnown RBP11.44□□□□□ -0.58
PTPRD-215ENST00000637354 EFCAB3Q8N7B9 438 aa11.44□□□□□ -0.58
PTPRD-215ENST00000637354 MMRN1Q13201 1228 aa11.43□□□□□ -0.58
PTPRD-215ENST00000637354 VGFO15240 615 aaPredicted RBP11.42□□□□□ -0.58
PTPRD-215ENST00000637354 SOX12O15370 315 aa11.42□□□□□ -0.58
PTPRD-215ENST00000637354 DOK7Q18PE1 504 aa11.42□□□□□ -0.58
PTPRD-215ENST00000637354 HS3ST6Q96QI5 342 aa11.42□□□□□ -0.58
PTPRD-215ENST00000637354 HOXB3P14651 431 aaPredicted RBP11.4□□□□□ -0.58
PTPRD-215ENST00000637354 FAM205CA6NFA0 338 aa11.38□□□□□ -0.59
PTPRD-215ENST00000637354 RIMBP2O15034 1052 aa11.38□□□□□ -0.59
PTPRD-215ENST00000637354 HOXB1P14653 301 aaPredicted RBP11.38□□□□□ -0.59
PTPRD-215ENST00000637354 PLCB2Q00722 1185 aa11.38□□□□□ -0.59
PTPRD-215ENST00000637354 ZNF710Q8N1W2 664 aa11.38□□□□□ -0.59
PTPRD-215ENST00000637354 TAOK2Q9UL54 1235 aa11.38□□□□□ -0.59
PTPRD-215ENST00000637354 ECM2O94769 699 aaPredicted RBP11.37□□□□□ -0.59
PTPRD-215ENST00000637354 RNF25Q96BH1 459 aaPredicted RBP11.37□□□□□ -0.59
PTPRD-215ENST00000637354 MICALL2Q8IY33 904 aa11.36□□□□□ -0.59
PTPRD-215ENST00000637354 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.35□□□□□ -0.59
PTPRD-215ENST00000637354 ZFP91Q96JP5 570 aaPredicted RBP11.35□□□□□ -0.59
PTPRD-215ENST00000637354 ZSWIM6Q9HCJ5 1215 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms