RNA–Protein interactions for RNA: ENST00000637239.2

TCF4-285, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 7,771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-285ENST00000637239 RSF1Q96T23 1441 aaPredicted RBP8.87□□□□□ -0.99
TCF4-285ENST00000637239 SENP3Q9H4L4 574 aaPredicted RBP8.87□□□□□ -0.99
TCF4-285ENST00000637239 DCAF8L1A6NGE4 600 aa8.87□□□□□ -0.99
TCF4-285ENST00000637239 EEA1Q15075 1411 aa8.86□□□□□ -0.99
TCF4-285ENST00000637239 ABCC8Q09428 1581 aa8.85□□□□□ -0.99
TCF4-285ENST00000637239 KANK1Q14678 1352 aa8.85□□□□□ -0.99
TCF4-285ENST00000637239 TONSLQ96HA7 1378 aa8.85□□□□□ -0.99
TCF4-285ENST00000637239 WRNQ14191 1432 aaPredicted RBP eCLIP8.84□□□□□ -0.99
TCF4-285ENST00000637239 KIF27Q86VH2 1401 aa8.84□□□□□ -0.99
TCF4-285ENST00000637239 EIF4G2P78344 907 aaKnown RBP eCLIP8.84□□□□□ -0.992e-7■■■■■ 31.9
TCF4-285ENST00000637239 ANP32AP39687 249 aaKnown RBP8.83□□□□□ -1
TCF4-285ENST00000637239 TMX4Q9H1E5 349 aaPredicted RBP8.82□□□□□ -1
TCF4-285ENST00000637239 WDR43Q15061 677 aaKnown RBP eCLIP8.82□□□□□ -1
TCF4-285ENST00000637239 CADPSQ9ULU8 1353 aa8.82□□□□□ -1
TCF4-285ENST00000637239 MLECQ14165 292 aa8.82□□□□□ -1
TCF4-285ENST00000637239 MYH16Q9H6N6 1097 aa8.82□□□□□ -1
TCF4-285ENST00000637239 CHIC2Q9UKJ5 165 aa8.82□□□□□ -1
TCF4-285ENST00000637239 EIF5BO60841 1220 aaKnown RBP8.81□□□□□ -1
TCF4-285ENST00000637239 GLIPR1L2Q4G1C9 344 aa8.81□□□□□ -1
TCF4-285ENST00000637239 POGKQ9P215 609 aa8.8□□□□□ -1
TCF4-285ENST00000637239 FOXD1Q16676 465 aa8.8□□□□□ -1
TCF4-285ENST00000637239 CLIP1P30622 1438 aa8.79□□□□□ -1
TCF4-285ENST00000637239 HSP90AA1P07900 732 aaKnown RBP8.79□□□□□ -1
TCF4-285ENST00000637239 KDM2AQ9Y2K7 1162 aa8.79□□□□□ -1
TCF4-285ENST00000637239 EIF4G1Q04637 1599 aaKnown RBP8.79□□□□□ -1
TCF4-285ENST00000637239 CCDC9Q9Y3X0 531 aaKnown RBP8.78□□□□□ -1
TCF4-285ENST00000637239 TMC1Q8TDI8 760 aa8.77□□□□□ -1
TCF4-285ENST00000637239 CEP164Q9UPV0 1460 aa8.77□□□□□ -1.01
TCF4-285ENST00000637239 MEX3CQ5U5Q3 659 aaKnown RBP8.77□□□□□ -1.01
TCF4-285ENST00000637239 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.77□□□□□ -1.01
TCF4-285ENST00000637239 CDCA8Q53HL2 280 aa8.77□□□□□ -1.01
TCF4-285ENST00000637239 ANP32BQ92688 251 aaKnown RBP8.77□□□□□ -1.01
TCF4-285ENST00000637239 ATAD2BQ9ULI0 1458 aa8.76□□□□□ -1.01
TCF4-285ENST00000637239 CFAP53Q96M91 514 aa8.76□□□□□ -1.01
TCF4-285ENST00000637239 CARMIL2Q6F5E8 1435 aa8.76□□□□□ -1.01
TCF4-285ENST00000637239 CFDP1Q9UEE9 299 aaPredicted RBP8.76□□□□□ -1.01
TCF4-285ENST00000637239 GOLGA2Q08379 1002 aa8.75□□□□□ -1.01
TCF4-285ENST00000637239 UPF2Q9HAU5 1272 aaKnown RBP8.75□□□□□ -1.01
TCF4-285ENST00000637239 OSCARQ8IYS5 282 aa8.74□□□□□ -1.01
TCF4-285ENST00000637239 NCAPD3P42695 1498 aa8.73□□□□□ -1.01
TCF4-285ENST00000637239 SALL2Q9Y467 1007 aaPredicted RBP8.73□□□□□ -1.01
TCF4-285ENST00000637239 EID1Q9Y6B2 187 aa8.72□□□□□ -1.01
TCF4-285ENST00000637239 PHF23Q9BUL5 403 aaPredicted RBP8.72□□□□□ -1.01
TCF4-285ENST00000637239 SMARCA4P51532 1647 aa8.71□□□□□ -1.01
TCF4-285ENST00000637239 TOP2AP11388 1531 aaKnown RBP8.7□□□□□ -1.02
TCF4-285ENST00000637239 FKBP8Q14318 412 aa8.7□□□□□ -1.02
TCF4-285ENST00000637239 PNNQ9H307 717 aaKnown RBP8.7□□□□□ -1.02
TCF4-285ENST00000637239 FAM9BQ8IZU0 186 aa8.69□□□□□ -1.02
TCF4-285ENST00000637239 SOGA1O94964 1423 aa8.69□□□□□ -1.02
TCF4-285ENST00000637239 PPM1GO15355 546 aaPredicted RBP8.69□□□□□ -1.02
TCF4-285ENST00000637239 CSB-PGBD3P0DP91 1061 aa8.68□□□□□ -1.02
TCF4-285ENST00000637239 HNRNPUQ00839 825 aaKnown RBP eCLIP8.68□□□□□ -1.02
TCF4-285ENST00000637239 NUDCQ9Y266 331 aa8.67□□□□□ -1.02
TCF4-285ENST00000637239 CCNB3Q8WWL7 1395 aa8.66□□□□□ -1.02
TCF4-285ENST00000637239 MROH2BQ7Z745 1585 aa8.66□□□□□ -1.02
TCF4-285ENST00000637239 G3V3G9 751 aa8.66□□□□□ -1.02
TCF4-285ENST00000637239 DCAF8Q5TAQ9 597 aa8.66□□□□□ -1.02
TCF4-285ENST00000637239 CUX2O14529 1486 aa8.65□□□□□ -1.02
TCF4-285ENST00000637239 TULP1O00294 542 aaPredicted RBP8.65□□□□□ -1.02
TCF4-285ENST00000637239 RGL3Q3MIN7 710 aa8.65□□□□□ -1.02
TCF4-285ENST00000637239 RRP7BPQ9NSQ0 103 aa8.65□□□□□ -1.02
TCF4-285ENST00000637239 MAPK8IP3Q9UPT6 1336 aa8.65□□□□□ -1.02
TCF4-285ENST00000637239 FANCD2Q9BXW9 1451 aa8.65□□□□□ -1.03
TCF4-285ENST00000637239 DDX10Q13206 875 aaKnown RBP8.64□□□□□ -1.03
TCF4-285ENST00000637239 PAK3O75914 559 aaPredicted RBP8.64□□□□□ -1.03
TCF4-285ENST00000637239 NBR1Q14596 966 aa8.63□□□□□ -1.03
TCF4-285ENST00000637239 CASC1Q6TDU7 716 aa8.63□□□□□ -1.03
TCF4-285ENST00000637239 CARMIL1Q5VZK9 1371 aa8.63□□□□□ -1.03
TCF4-285ENST00000637239 KNSTRNQ9Y448 316 aa8.62□□□□□ -1.03
TCF4-285ENST00000637239 HMGXB3Q12766 1538 aa8.62□□□□□ -1.03
TCF4-285ENST00000637239 FHAD1B1AJZ9 1412 aa8.62□□□□□ -1.03
TCF4-285ENST00000637239 GGT6Q6P531 493 aa8.62□□□□□ -1.03
TCF4-285ENST00000637239 GOLGA3Q08378 1498 aa8.62□□□□□ -1.03
TCF4-285ENST00000637239 CC2D2AQ9P2K1 1620 aa8.61□□□□□ -1.03
TCF4-285ENST00000637239 CCDC88BA6NC98 1476 aa8.61□□□□□ -1.03
TCF4-285ENST00000637239 CCDC136Q96JN2 1154 aa8.61□□□□□ -1.03
TCF4-285ENST00000637239 OS9Q13438 667 aaPredicted RBP8.6□□□□□ -1.03
TCF4-285ENST00000637239 SRPK2P78362 688 aaKnown RBP8.59□□□□□ -1.03
TCF4-285ENST00000637239 ISY1Q9ULR0 285 aaKnown RBP8.59□□□□□ -1.03
TCF4-285ENST00000637239 EFCAB2Q5VUJ9 269 aa8.58□□□□□ -1.04
TCF4-285ENST00000637239 HDGFL2Q7Z4V5 671 aaPredicted RBP8.58□□□□□ -1.04
TCF4-285ENST00000637239 LAS1LQ9Y4W2 734 aaKnown RBP8.58□□□□□ -1.04
TCF4-285ENST00000637239 CYB5RLQ6IPT4 315 aa8.58□□□□□ -1.04
TCF4-285ENST00000637239 CHMP4BQ9H444 224 aaKnown RBP8.58□□□□□ -1.04
TCF4-285ENST00000637239 RTF1Q92541 710 aaKnown RBP8.58□□□□□ -1.04
TCF4-285ENST00000637239 EVA1CP58658 441 aa8.57□□□□□ -1.04
TCF4-285ENST00000637239 SF3B2Q13435 895 aaKnown RBP8.57□□□□□ -1.04
TCF4-285ENST00000637239 MRC2Q9UBG0 1479 aa8.57□□□□□ -1.04
TCF4-285ENST00000637239 MSH5O43196 834 aa8.56□□□□□ -1.04
TCF4-285ENST00000637239 ZRSR1Q15695 479 aaKnown RBP8.56□□□□□ -1.04
TCF4-285ENST00000637239 CLSTN1O94985 981 aa8.56□□□□□ -1.04
TCF4-285ENST00000637239 NCLP19338 710 aaKnown RBP8.56□□□□□ -1.04
TCF4-285ENST00000637239 TDRD9Q8NDG6 1382 aaKnown RBP8.55□□□□□ -1.04
TCF4-285ENST00000637239 SOX12O15370 315 aa8.55□□□□□ -1.04
TCF4-285ENST00000637239 IRX6P78412 446 aaPredicted RBP8.55□□□□□ -1.04
TCF4-285ENST00000637239 CHMP4AQ9BY43 222 aa8.55□□□□□ -1.04
TCF4-285ENST00000637239 MRS2Q9HD23 443 aa8.54□□□□□ -1.04
TCF4-285ENST00000637239 KRI1Q8N9T8 703 aaKnown RBP8.54□□□□□ -1.04
TCF4-285ENST00000637239 CARD11Q9BXL7 1154 aa8.54□□□□□ -1.04
TCF4-285ENST00000637239 FTSJ3Q8IY81 847 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms