RNA–Protein interactions for RNA: ENST00000637194.1

SYNGAP1-220, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-220ENST00000637194 LHX8Q68G74 356 aa5.43□□□□□ -1.54
SYNGAP1-220ENST00000637194 RASEFQ8IZ41 740 aa5.43□□□□□ -1.54
SYNGAP1-220ENST00000637194 MS4A3Q96HJ5 214 aa5.42□□□□□ -1.54
SYNGAP1-220ENST00000637194 NUBP1P53384 320 aa5.41□□□□□ -1.54
SYNGAP1-220ENST00000637194 KIF12Q96FN5 646 aa5.41□□□□□ -1.54
SYNGAP1-220ENST00000637194 ASTLQ6HA08 431 aaPredicted RBP5.4□□□□□ -1.54
SYNGAP1-220ENST00000637194 VASPP50552 380 aaPredicted RBP5.39□□□□□ -1.55
SYNGAP1-220ENST00000637194 SGIP1Q9BQI5 828 aa5.39□□□□□ -1.55
SYNGAP1-220ENST00000637194 FAM212AQ96EL1 285 aa5.38□□□□□ -1.55
SYNGAP1-220ENST00000637194 ATMINO43313 823 aaPredicted RBP5.37□□□□□ -1.55
SYNGAP1-220ENST00000637194 MAP3K13O43283 966 aa5.36□□□□□ -1.55
SYNGAP1-220ENST00000637194 TIE1P35590 1138 aa5.35□□□□□ -1.55
SYNGAP1-220ENST00000637194 PELP1Q8IZL8 1130 aaKnown RBP5.35□□□□□ -1.55
SYNGAP1-220ENST00000637194 SLC39A7Q92504 469 aa5.35□□□□□ -1.55
SYNGAP1-220ENST00000637194 C7P10643 843 aa5.34□□□□□ -1.55
SYNGAP1-220ENST00000637194 KLHL34Q8N239 644 aa5.33□□□□□ -1.56
SYNGAP1-220ENST00000637194 PCDHB13Q9Y5F0 798 aa5.33□□□□□ -1.56
SYNGAP1-220ENST00000637194 ATN1P54259 1190 aaPredicted RBP5.32□□□□□ -1.56
SYNGAP1-220ENST00000637194 DCAF8Q5TAQ9 597 aa5.32□□□□□ -1.56
SYNGAP1-220ENST00000637194 BMP2KQ9NSY1 1161 aaPredicted RBP5.32□□□□□ -1.56
SYNGAP1-220ENST00000637194 METRNQ9UJH8 293 aa5.32□□□□□ -1.56
SYNGAP1-220ENST00000637194 TRPC6Q9Y210 931 aa5.32□□□□□ -1.56
SYNGAP1-220ENST00000637194 GSE1Q14687 1217 aa5.31□□□□□ -1.56
SYNGAP1-220ENST00000637194 IFNL1Q8IU54 200 aa5.3□□□□□ -1.56
SYNGAP1-220ENST00000637194 TTLL13PA6NNM8 815 aa5.29□□□□□ -1.56
SYNGAP1-220ENST00000637194 POTEB2H3BUK9 544 aa5.29□□□□□ -1.56
SYNGAP1-220ENST00000637194 CHRM1P11229 460 aaPredicted RBP5.28□□□□□ -1.56
SYNGAP1-220ENST00000637194 IER5LQ5T953 404 aa5.28□□□□□ -1.56
SYNGAP1-220ENST00000637194 IFNLR1Q8IU57 520 aaPredicted RBP5.28□□□□□ -1.56
SYNGAP1-220ENST00000637194 SPOCK2Q92563 424 aa5.28□□□□□ -1.56
SYNGAP1-220ENST00000637194 PYGBP11216 843 aa5.27□□□□□ -1.57
SYNGAP1-220ENST00000637194 MAMSTRQ6ZN01 415 aa5.27□□□□□ -1.57
SYNGAP1-220ENST00000637194 OTUD5Q96G74 571 aa5.27□□□□□ -1.57
SYNGAP1-220ENST00000637194 POTEFA5A3E0 1075 aa5.25□□□□□ -1.57
SYNGAP1-220ENST00000637194 ZNF467Q7Z7K2 595 aaPredicted RBP5.25□□□□□ -1.57
SYNGAP1-220ENST00000637194 TMEM106CQ9BVX2 250 aa5.25□□□□□ -1.57
SYNGAP1-220ENST00000637194 TRIM35Q9UPQ4 493 aa5.25□□□□□ -1.57
SYNGAP1-220ENST00000637194 SEC24BO95487 1268 aa5.23□□□□□ -1.57
SYNGAP1-220ENST00000637194 POTEJP0CG39 1038 aa5.23□□□□□ -1.57
SYNGAP1-220ENST00000637194 PCDHB8Q9UN66 801 aa5.23□□□□□ -1.57
SYNGAP1-220ENST00000637194 SCUBE2Q9NQ36 999 aa5.22□□□□□ -1.57
SYNGAP1-220ENST00000637194 COLQQ9Y215 455 aaPredicted RBP5.22□□□□□ -1.57
SYNGAP1-220ENST00000637194 TRIM41Q8WV44 630 aa5.21□□□□□ -1.58
SYNGAP1-220ENST00000637194 CIZ1Q9ULV3 898 aaPredicted RBP5.2□□□□□ -1.58
SYNGAP1-220ENST00000637194 PLCG2P16885 1265 aa5.19□□□□□ -1.58
SYNGAP1-220ENST00000637194 IRX5P78411 483 aaPredicted RBP5.19□□□□□ -1.58
SYNGAP1-220ENST00000637194 PSEN1P49768 467 aa5.18□□□□□ -1.58
SYNGAP1-220ENST00000637194 PDAP1Q13442 181 aaKnown RBP5.18□□□□□ -1.58
SYNGAP1-220ENST00000637194 OCEL1Q9H607 264 aa5.18□□□□□ -1.58
SYNGAP1-220ENST00000637194 GOLGA2Q08379 1002 aa5.15□□□□□ -1.59
SYNGAP1-220ENST00000637194 MKRN3Q13064 507 aaKnown RBP5.15□□□□□ -1.59
SYNGAP1-220ENST00000637194 PDCD7Q8N8D1 485 aaKnown RBP5.13□□□□□ -1.59
SYNGAP1-220ENST00000637194 ILDR1Q86SU0 546 aaPredicted RBP5.12□□□□□ -1.59
SYNGAP1-220ENST00000637194 L3MBTL3Q96JM7 780 aaPredicted RBP5.11□□□□□ -1.59
SYNGAP1-220ENST00000637194 RIOK3O14730 519 aaKnown RBP5.1□□□□□ -1.59
SYNGAP1-220ENST00000637194 SLAIN1Q8ND83 568 aa5.1□□□□□ -1.59
SYNGAP1-220ENST00000637194 CABP2Q9NPB3 220 aa5.1□□□□□ -1.59
SYNGAP1-220ENST00000637194 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.1□□□□□ -1.59
SYNGAP1-220ENST00000637194 POTEMA6NI47 508 aa5.09□□□□□ -1.59
SYNGAP1-220ENST00000637194 LCE2DQ5TA82 110 aaPredicted RBP5.09□□□□□ -1.59
SYNGAP1-220ENST00000637194 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.09□□□□□ -1.59
SYNGAP1-220ENST00000637194 VGFO15240 615 aaPredicted RBP5.08□□□□□ -1.6
SYNGAP1-220ENST00000637194 POTEGQ6S5H5 508 aa5.08□□□□□ -1.6
SYNGAP1-220ENST00000637194 RNF25Q96BH1 459 aaPredicted RBP5.08□□□□□ -1.6
SYNGAP1-220ENST00000637194 FAM163AQ96GL9 167 aaPredicted RBP5.08□□□□□ -1.6
SYNGAP1-220ENST00000637194 C3orf67Q6ZVT6 689 aa5.07□□□□□ -1.6
SYNGAP1-220ENST00000637194 PCDH10Q9P2E7 1040 aa5.07□□□□□ -1.6
SYNGAP1-220ENST00000637194 TAOK2Q9UL54 1235 aa5.07□□□□□ -1.6
SYNGAP1-220ENST00000637194 SNPHO15079 494 aa5.06□□□□□ -1.6
SYNGAP1-220ENST00000637194 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.05□□□□□ -1.6
SYNGAP1-220ENST00000637194 SOX12O15370 315 aa5.05□□□□□ -1.6
SYNGAP1-220ENST00000637194 EFCAB3Q8N7B9 438 aa5.05□□□□□ -1.6
SYNGAP1-220ENST00000637194 ZFP91Q96JP5 570 aaPredicted RBP5.05□□□□□ -1.6
SYNGAP1-220ENST00000637194 G3V3G9 751 aa5.03□□□□□ -1.6
SYNGAP1-220ENST00000637194 ST18O60284 1047 aa5.03□□□□□ -1.6
SYNGAP1-220ENST00000637194 DPY19L2Q6NUT2 758 aa5.03□□□□□ -1.6
SYNGAP1-220ENST00000637194 BOLA1Q9Y3E2 137 aa5.03□□□□□ -1.6
SYNGAP1-220ENST00000637194 ECM2O94769 699 aaPredicted RBP5.02□□□□□ -1.61
SYNGAP1-220ENST00000637194 TMEM121BQ9BXQ6 578 aaPredicted RBP5.02□□□□□ -1.61
SYNGAP1-220ENST00000637194 PKD2Q13563 968 aa5.01□□□□□ -1.61
SYNGAP1-220ENST00000637194 NLRP6P59044 892 aa4.99□□□□□ -1.61
SYNGAP1-220ENST00000637194 BCL11BQ9C0K0 894 aaPredicted RBP4.99□□□□□ -1.61
SYNGAP1-220ENST00000637194 MS4A4AQ96JQ5 239 aa4.98□□□□□ -1.61
SYNGAP1-220ENST00000637194 PHF8Q9UPP1 1060 aa4.98□□□□□ -1.61
SYNGAP1-220ENST00000637194 STK25O00506 426 aa4.97□□□□□ -1.61
SYNGAP1-220ENST00000637194 RGL2O15211 777 aa4.97□□□□□ -1.61
SYNGAP1-220ENST00000637194 MICALL2Q8IY33 904 aa4.97□□□□□ -1.61
SYNGAP1-220ENST00000637194 PLSCR2Q9NRY7 297 aa4.97□□□□□ -1.61
SYNGAP1-220ENST00000637194 STK24Q9Y6E0 443 aa4.97□□□□□ -1.61
SYNGAP1-220ENST00000637194 CDAN1Q8IWY9 1227 aa4.96□□□□□ -1.62
SYNGAP1-220ENST00000637194 FBXO22Q8NEZ5 403 aa4.96□□□□□ -1.62
SYNGAP1-220ENST00000637194 MFRPQ9BY79 579 aa4.95□□□□□ -1.62
SYNGAP1-220ENST00000637194 HOXB3P14651 431 aaPredicted RBP4.94□□□□□ -1.62
SYNGAP1-220ENST00000637194 DOK7Q18PE1 504 aa4.94□□□□□ -1.62
SYNGAP1-220ENST00000637194 EMP3P54852 163 aa4.92□□□□□ -1.62
SYNGAP1-220ENST00000637194 TMEM92Q6UXU6 159 aa4.92□□□□□ -1.62
SYNGAP1-220ENST00000637194 MARVELD3Q96A59 401 aa4.92□□□□□ -1.62
SYNGAP1-220ENST00000637194 RIMBP2O15034 1052 aa4.91□□□□□ -1.62
SYNGAP1-220ENST00000637194 HOXB1P14653 301 aaPredicted RBP4.91□□□□□ -1.62
SYNGAP1-220ENST00000637194 HS6ST3Q8IZP7 471 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms