RNA–Protein interactions for RNA: ENST00000636901.1

CACNB4-238, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5 BASIC

Gene CACNB4, Length 7,706 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-238	ENST00000636901	MYO10	Q9HD67	2058 aa		3.85	□□□□□ -1.79
CACNB4-238	ENST00000636901	CENPB	P07199	599 aa	Predicted RBP	3.85	□□□□□ -1.79
CACNB4-238	ENST00000636901	WDR70	Q9NW82	654 aa		3.85	□□□□□ -1.79
CACNB4-238	ENST00000636901	MAP3K9	P80192	1104 aa		3.85	□□□□□ -1.79
CACNB4-238	ENST00000636901	BAZ1B	Q9UIG0	1483 aa	Known RBP	3.84	□□□□□ -1.79
CACNB4-238	ENST00000636901	HAP1	P54257	671 aa	Predicted RBP	3.84	□□□□□ -1.79
CACNB4-238	ENST00000636901	HDGF	P51858	240 aa	Known RBP	3.84	□□□□□ -1.8
CACNB4-238	ENST00000636901	NEUROD2	Q15784	382 aa		3.84	□□□□□ -1.8
CACNB4-238	ENST00000636901	ARX	Q96QS3	562 aa		3.83	□□□□□ -1.8
CACNB4-238	ENST00000636901	SCRIB	Q14160	1630 aa		3.83	□□□□□ -1.8
CACNB4-238	ENST00000636901	KCNA4	P22459	653 aa		3.82	□□□□□ -1.8
CACNB4-238	ENST00000636901	DCAF8	Q5TAQ9	597 aa		3.82	□□□□□ -1.8
CACNB4-238	ENST00000636901	ZBTB12	Q9Y330	459 aa	Predicted RBP	3.82	□□□□□ -1.8
CACNB4-238	ENST00000636901	NPM3	O75607	178 aa	Known RBP	3.82	□□□□□ -1.8
CACNB4-238	ENST00000636901	ABCC8	Q09428	1581 aa		3.82	□□□□□ -1.8
CACNB4-238	ENST00000636901	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	3.82	□□□□□ -1.8	6e-7	■■■■■ 26.8
CACNB4-238	ENST00000636901	SPAG17	Q6Q759	2223 aa		3.81	□□□□□ -1.8
CACNB4-238	ENST00000636901	SUPT5H	O00267	1087 aa	Known RBP	3.8	□□□□□ -1.8
CACNB4-238	ENST00000636901	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	3.8	□□□□□ -1.8
CACNB4-238	ENST00000636901	SMARCA2	P51531	1590 aa		3.8	□□□□□ -1.8
CACNB4-238	ENST00000636901	ASXL3	Q9C0F0	2248 aa		3.8	□□□□□ -1.8
CACNB4-238	ENST00000636901	ARID4B	Q4LE39	1312 aa	Predicted RBP	3.8	□□□□□ -1.8
CACNB4-238	ENST00000636901	STAG3	Q9UJ98	1225 aa		3.79	□□□□□ -1.8
CACNB4-238	ENST00000636901	NUMA1	Q14980	2115 aa		3.79	□□□□□ -1.8
CACNB4-238	ENST00000636901	APC2	O95996	2303 aa		3.79	□□□□□ -1.8
CACNB4-238	ENST00000636901	FOXD4L1	Q9NU39	408 aa		3.79	□□□□□ -1.8
CACNB4-238	ENST00000636901	BRWD1	Q9NSI6	2320 aa		3.79	□□□□□ -1.8
CACNB4-238	ENST00000636901	DCAF1	Q9Y4B6	1507 aa		3.79	□□□□□ -1.8
CACNB4-238	ENST00000636901	GOLGA2	Q08379	1002 aa		3.78	□□□□□ -1.8
CACNB4-238	ENST00000636901	KNL1	Q8NG31	2342 aa		3.78	□□□□□ -1.8
CACNB4-238	ENST00000636901	C14orf37	Q86TY3	774 aa		3.78	□□□□□ -1.8
CACNB4-238	ENST00000636901	VSIG10	Q8N0Z9	540 aa		3.77	□□□□□ -1.81
CACNB4-238	ENST00000636901	CUX2	O14529	1486 aa		3.77	□□□□□ -1.81
CACNB4-238	ENST00000636901	CARMIL2	Q6F5E8	1435 aa		3.77	□□□□□ -1.81
CACNB4-238	ENST00000636901	PPP4R2	Q9NY27	417 aa		3.76	□□□□□ -1.81
CACNB4-238	ENST00000636901	CACNA1B	Q00975	2339 aa		3.76	□□□□□ -1.81
CACNB4-238	ENST00000636901	UBTF	P17480	764 aa	Known RBP	3.76	□□□□□ -1.81
CACNB4-238	ENST00000636901	CACNA1G	O43497	2377 aa		3.76	□□□□□ -1.81
CACNB4-238	ENST00000636901	AK7	Q96M32	723 aa		3.76	□□□□□ -1.81
CACNB4-238	ENST00000636901	ISY1	Q9ULR0	285 aa	Known RBP	3.76	□□□□□ -1.81
CACNB4-238	ENST00000636901	DOCK10	Q96BY6	2186 aa		3.75	□□□□□ -1.81
CACNB4-238	ENST00000636901	ZBTB7C	A1YPR0	619 aa		3.75	□□□□□ -1.81
CACNB4-238	ENST00000636901	RTL5	Q5HYW3	569 aa	Predicted RBP	3.74	□□□□□ -1.81
CACNB4-238	ENST00000636901	MYCN	P04198	464 aa	Predicted RBP	3.74	□□□□□ -1.81
CACNB4-238	ENST00000636901	DOPEY2	Q9Y3R5	2298 aa		3.74	□□□□□ -1.81
CACNB4-238	ENST00000636901	CACNA1E	Q15878	2313 aa		3.74	□□□□□ -1.81
CACNB4-238	ENST00000636901	PDE4DIP	Q5VU43	2346 aa		3.74	□□□□□ -1.81
CACNB4-238	ENST00000636901	CANX	P27824	592 aa	Known RBP	3.74	□□□□□ -1.81
CACNB4-238	ENST00000636901	HSP90AA1	P07900	732 aa	Known RBP	3.74	□□□□□ -1.81
CACNB4-238	ENST00000636901	NCL	P19338	710 aa	Known RBP	3.74	□□□□□ -1.81
CACNB4-238	ENST00000636901	KLHL34	Q8N239	644 aa		3.74	□□□□□ -1.81
CACNB4-238	ENST00000636901	ANO8	Q9HCE9	1232 aa	Predicted RBP	3.74	□□□□□ -1.81
CACNB4-238	ENST00000636901	RP1L1	Q8IWN7	2480 aa	Predicted RBP	3.74	□□□□□ -1.81
CACNB4-238	ENST00000636901	ANP32B	Q92688	251 aa	Known RBP	3.73	□□□□□ -1.81
CACNB4-238	ENST00000636901	DNAJC5	Q9H3Z4	198 aa		3.73	□□□□□ -1.81
CACNB4-238	ENST00000636901	POGZ	Q7Z3K3	1410 aa		3.73	□□□□□ -1.81
CACNB4-238	ENST00000636901	RSF1	Q96T23	1441 aa	Predicted RBP	3.73	□□□□□ -1.81
CACNB4-238	ENST00000636901	MYO7A	Q13402	2215 aa		3.73	□□□□□ -1.81
CACNB4-238	ENST00000636901	CFAP44	Q96MT7	982 aa		3.73	□□□□□ -1.81
CACNB4-238	ENST00000636901	RYDEN	Q9NUL5	291 aa	Known RBP	3.73	□□□□□ -1.81
CACNB4-238	ENST00000636901	PCGF6	Q9BYE7	350 aa		3.73	□□□□□ -1.81
CACNB4-238	ENST00000636901	PPM1F	P49593	454 aa	Predicted RBP	3.73	□□□□□ -1.81
CACNB4-238	ENST00000636901	PLEKHD1	A6NEE1	506 aa		3.73	□□□□□ -1.81
CACNB4-238	ENST00000636901	CSRNP3	Q8WYN3	585 aa		3.72	□□□□□ -1.81
CACNB4-238	ENST00000636901	TMX4	Q9H1E5	349 aa	Predicted RBP	3.72	□□□□□ -1.81
CACNB4-238	ENST00000636901	TRIM44	Q96DX7	344 aa	Predicted RBP	3.72	□□□□□ -1.81
CACNB4-238	ENST00000636901	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	3.71	□□□□□ -1.82
CACNB4-238	ENST00000636901	ARID1B	Q8NFD5	2236 aa	Predicted RBP	3.71	□□□□□ -1.82
CACNB4-238	ENST00000636901	RRP12	Q5JTH9	1297 aa	Known RBP	3.71	□□□□□ -1.82
CACNB4-238	ENST00000636901	BBX	Q8WY36	941 aa	Predicted RBP	3.7	□□□□□ -1.82
CACNB4-238	ENST00000636901	CROCC	Q5TZA2	2017 aa		3.7	□□□□□ -1.82
CACNB4-238	ENST00000636901	CEP164	Q9UPV0	1460 aa		3.7	□□□□□ -1.82
CACNB4-238	ENST00000636901	HEATR1	Q9H583	2144 aa	Known RBP	3.7	□□□□□ -1.82
CACNB4-238	ENST00000636901	GTF3C3	Q9Y5Q9	886 aa		3.7	□□□□□ -1.82
CACNB4-238	ENST00000636901	SEC16A	O15027	2179 aa		3.69	□□□□□ -1.82
CACNB4-238	ENST00000636901	SF3B2	Q13435	895 aa	Known RBP	3.69	□□□□□ -1.82
CACNB4-238	ENST00000636901	PPP1R15A	O75807	674 aa	Predicted RBP	3.69	□□□□□ -1.82
CACNB4-238	ENST00000636901	CADPS	Q9ULU8	1353 aa		3.69	□□□□□ -1.82
CACNB4-238	ENST00000636901	ITGAE	P38570	1179 aa		3.69	□□□□□ -1.82
CACNB4-238	ENST00000636901	TSPY4	P0CV99	314 aa		3.69	□□□□□ -1.82
CACNB4-238	ENST00000636901	TSPY10	P0CW01	314 aa		3.69	□□□□□ -1.82
CACNB4-238	ENST00000636901	NBR1	Q14596	966 aa		3.69	□□□□□ -1.82
CACNB4-238	ENST00000636901	CYB5RL	Q6IPT4	315 aa		3.69	□□□□□ -1.82
CACNB4-238	ENST00000636901	WWC1	Q8IX03	1113 aa		3.69	□□□□□ -1.82
CACNB4-238	ENST00000636901	ANP32C	O43423	234 aa		3.68	□□□□□ -1.82
CACNB4-238	ENST00000636901	NIN	Q8N4C6	2090 aa		3.68	□□□□□ -1.82
CACNB4-238	ENST00000636901	PDE4C	Q08493	712 aa		3.68	□□□□□ -1.82
CACNB4-238	ENST00000636901	ZCCHC6	Q5VYS8	1495 aa	Known RBP	3.68	□□□□□ -1.82
CACNB4-238	ENST00000636901	MYO18A	Q92614	2054 aa	Known RBP	3.68	□□□□□ -1.82
CACNB4-238	ENST00000636901	MIER1	Q8N108	512 aa		3.67	□□□□□ -1.82
CACNB4-238	ENST00000636901	CWC22	Q9HCG8	908 aa	Known RBP	3.67	□□□□□ -1.82
CACNB4-238	ENST00000636901	EID1	Q9Y6B2	187 aa		3.67	□□□□□ -1.82
CACNB4-238	ENST00000636901		G3V3G9	751 aa		3.67	□□□□□ -1.82
CACNB4-238	ENST00000636901	WASHC2A	Q641Q2	1341 aa		3.67	□□□□□ -1.82
CACNB4-238	ENST00000636901	MAP1B	P46821	2468 aa	Known RBP	3.66	□□□□□ -1.82
CACNB4-238	ENST00000636901	ZRSR1	Q15695	479 aa	Known RBP	3.66	□□□□□ -1.82
CACNB4-238	ENST00000636901	TPR	P12270	2363 aa	Known RBP	3.66	□□□□□ -1.82
CACNB4-238	ENST00000636901	DNAJC13	O75165	2243 aa		3.66	□□□□□ -1.82
CACNB4-238	ENST00000636901	UNC13C	Q8NB66	2214 aa		3.66	□□□□□ -1.82
CACNB4-238	ENST00000636901	PAF1	Q8N7H5	531 aa		3.66	□□□□□ -1.82

Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms