RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 KCNH8Q96L42 1107 aa23.95■■□□□ 1.42
CACNA1A-227ENST00000636549 TMC1Q8TDI8 760 aa23.93■■□□□ 1.42
CACNA1A-227ENST00000636549 LAS1LQ9Y4W2 734 aaKnown RBP23.92■■□□□ 1.42
CACNA1A-227ENST00000636549 DDX10Q13206 875 aaKnown RBP23.91■■□□□ 1.42
CACNA1A-227ENST00000636549 NCLP19338 710 aaKnown RBP23.9■■□□□ 1.42
CACNA1A-227ENST00000636549 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.89■■□□□ 1.41
CACNA1A-227ENST00000636549 MYH16Q9H6N6 1097 aa23.86■■□□□ 1.41
CACNA1A-227ENST00000636549 ISY1Q9ULR0 285 aaKnown RBP23.84■■□□□ 1.41
CACNA1A-227ENST00000636549 TRHP20396 242 aaPredicted RBP23.83■■□□□ 1.4
CACNA1A-227ENST00000636549 NAP1L2Q9ULW6 460 aaPredicted RBP23.81■■□□□ 1.4
CACNA1A-227ENST00000636549 SOX12O15370 315 aa23.8■■□□□ 1.4
CACNA1A-227ENST00000636549 ANO8Q9HCE9 1232 aaPredicted RBP23.8■■□□□ 1.4
CACNA1A-227ENST00000636549 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.77■■□□□ 1.4
CACNA1A-227ENST00000636549 CCDC136Q96JN2 1154 aa23.77■■□□□ 1.4
CACNA1A-227ENST00000636549 TONSLQ96HA7 1378 aa23.76■■□□□ 1.39
CACNA1A-227ENST00000636549 RGL3Q3MIN7 710 aa23.73■■□□□ 1.39
CACNA1A-227ENST00000636549 TNNT2P45379 298 aaPredicted RBP23.72■■□□□ 1.39
CACNA1A-227ENST00000636549 NEUROD2Q15784 382 aa23.71■■□□□ 1.39
CACNA1A-227ENST00000636549 PLCB2Q00722 1185 aa23.69■■□□□ 1.38
CACNA1A-227ENST00000636549 PRM3Q9NNZ6 103 aa23.67■■□□□ 1.38
CACNA1A-227ENST00000636549 MLECQ14165 292 aa23.64■■□□□ 1.37
CACNA1A-227ENST00000636549 PDE4CQ08493 712 aa23.63■■□□□ 1.37
CACNA1A-227ENST00000636549 ZRSR1Q15695 479 aaKnown RBP23.63■■□□□ 1.37
CACNA1A-227ENST00000636549 GOLGA2Q08379 1002 aa23.62■■□□□ 1.37
CACNA1A-227ENST00000636549 PTMAP06454 111 aaKnown RBP23.57■■□□□ 1.36
CACNA1A-227ENST00000636549 MRS2Q9HD23 443 aa23.57■■□□□ 1.36
CACNA1A-227ENST00000636549 DNTTIP2Q5QJE6 756 aaKnown RBP23.56■■□□□ 1.36
CACNA1A-227ENST00000636549 OS9Q13438 667 aaPredicted RBP23.54■■□□□ 1.36
CACNA1A-227ENST00000636549 CHMP7Q8WUX9 453 aaPredicted RBP23.54■■□□□ 1.36
CACNA1A-227ENST00000636549 RRP7BPQ9NSQ0 103 aa23.54■■□□□ 1.36
CACNA1A-227ENST00000636549 ZNF330Q9Y3S2 320 aaPredicted RBP23.54■■□□□ 1.36
CACNA1A-227ENST00000636549 TSPY4P0CV99 314 aa23.47■■□□□ 1.35
CACNA1A-227ENST00000636549 TSPY10P0CW01 314 aa23.47■■□□□ 1.35
CACNA1A-227ENST00000636549 FGD1P98174 961 aa23.46■■□□□ 1.35
CACNA1A-227ENST00000636549 CCDC9Q9Y3X0 531 aaKnown RBP23.46■■□□□ 1.35
CACNA1A-227ENST00000636549 TRIM44Q96DX7 344 aaPredicted RBP23.45■■□□□ 1.34
CACNA1A-227ENST00000636549 ERICH6BQ5W0A0 696 aa23.45■■□□□ 1.34
CACNA1A-227ENST00000636549 FBXO3Q9UK99 471 aa23.45■■□□□ 1.34
CACNA1A-227ENST00000636549 GLIPR1L2Q4G1C9 344 aa23.43■■□□□ 1.34
CACNA1A-227ENST00000636549 CSRNP3Q8WYN3 585 aa23.43■■□□□ 1.34
CACNA1A-227ENST00000636549 ACIN1Q9UKV3 1341 aaKnown RBP23.42■■□□□ 1.34
CACNA1A-227ENST00000636549 RTN4Q9NQC3 1192 aaKnown RBP23.41■■□□□ 1.34
CACNA1A-227ENST00000636549 SAFB2Q14151 953 aaKnown RBP eCLIP23.41■■□□□ 1.34
CACNA1A-227ENST00000636549 FTSJ3Q8IY81 847 aaKnown RBP23.41■■□□□ 1.34
CACNA1A-227ENST00000636549 SPRYD3Q8NCJ5 442 aa23.39■■□□□ 1.33
CACNA1A-227ENST00000636549 FRAT1Q92837 279 aaPredicted RBP23.37■■□□□ 1.33
CACNA1A-227ENST00000636549 KCNJ4P48050 445 aa23.37■■□□□ 1.33
CACNA1A-227ENST00000636549 POGKQ9P215 609 aa23.36■■□□□ 1.33
CACNA1A-227ENST00000636549 CASC1Q6TDU7 716 aa23.34■■□□□ 1.33
CACNA1A-227ENST00000636549 U2SURPO15042 1029 aaKnown RBP23.33■■□□□ 1.33
CACNA1A-227ENST00000636549 APBB1O00213 710 aa23.31■■□□□ 1.32
CACNA1A-227ENST00000636549 CC2D1BQ5T0F9 858 aaKnown RBP23.29■■□□□ 1.32
CACNA1A-227ENST00000636549 PAK3O75914 559 aaPredicted RBP23.28■■□□□ 1.32
CACNA1A-227ENST00000636549 RGS3P49796 1198 aa23.27■■□□□ 1.32
CACNA1A-227ENST00000636549 SCRIBQ14160 1630 aa23.25■■□□□ 1.31
CACNA1A-227ENST00000636549 ARID3AQ99856 593 aa23.23■■□□□ 1.31
CACNA1A-227ENST00000636549 GOLGA6L22H0YM25 854 aa23.23■■□□□ 1.31
CACNA1A-227ENST00000636549 WWC1Q8IX03 1113 aa23.22■■□□□ 1.31
CACNA1A-227ENST00000636549 BECN1Q14457 450 aa23.22■■□□□ 1.31
CACNA1A-227ENST00000636549 MAPK8IP3Q9UPT6 1336 aa23.22■■□□□ 1.31
CACNA1A-227ENST00000636549 CFAP53Q96M91 514 aa23.19■■□□□ 1.3
CACNA1A-227ENST00000636549 NAP1L5Q96NT1 182 aaPredicted RBP23.17■■□□□ 1.3
CACNA1A-227ENST00000636549 STK26Q9P289 416 aa23.16■■□□□ 1.3
CACNA1A-227ENST00000636549 MTUS2Q5JR59 1369 aa23.15■■□□□ 1.3
CACNA1A-227ENST00000636549 HSP90AB1P08238 724 aaKnown RBP23.15■■□□□ 1.3
CACNA1A-227ENST00000636549 CSB-PGBD3P0DP91 1061 aa23.15■■□□□ 1.3
CACNA1A-227ENST00000636549 KNSTRNQ9Y448 316 aa23.15■■□□□ 1.3
CACNA1A-227ENST00000636549 GNL2Q13823 731 aaKnown RBP23.13■■□□□ 1.29
CACNA1A-227ENST00000636549 G3V3G9 751 aa23.13■■□□□ 1.29
CACNA1A-227ENST00000636549 DCAF8Q5TAQ9 597 aa23.13■■□□□ 1.29
CACNA1A-227ENST00000636549 KLHL34Q8N239 644 aa23.12■■□□□ 1.29
CACNA1A-227ENST00000636549 KRI1Q8N9T8 703 aaKnown RBP23.11■■□□□ 1.29
CACNA1A-227ENST00000636549 DRC7Q8IY82 874 aa23.11■■□□□ 1.29
CACNA1A-227ENST00000636549 CHMP3Q9Y3E7 222 aa23.1■■□□□ 1.29
CACNA1A-227ENST00000636549 CREBRFQ8IUR6 639 aa23.09■■□□□ 1.29
CACNA1A-227ENST00000636549 MSH5O43196 834 aa23.07■■□□□ 1.28
CACNA1A-227ENST00000636549 VPS53Q5VIR6 699 aa23.05■■□□□ 1.28
CACNA1A-227ENST00000636549 SRPK2P78362 688 aaKnown RBP23.04■■□□□ 1.28
CACNA1A-227ENST00000636549 NOC3LQ8WTT2 800 aaKnown RBP23.03■■□□□ 1.28
CACNA1A-227ENST00000636549 TMX4Q9H1E5 349 aaPredicted RBP23.03■■□□□ 1.28
CACNA1A-227ENST00000636549 GOLGA6L4A6NEF3 574 aa23.02■■□□□ 1.28
CACNA1A-227ENST00000636549 MIER1Q8N108 512 aa23.01■■□□□ 1.27
CACNA1A-227ENST00000636549 EIF4G2P78344 907 aaKnown RBP eCLIP23■■□□□ 1.27
CACNA1A-227ENST00000636549 CARD11Q9BXL7 1154 aa23■■□□□ 1.27
CACNA1A-227ENST00000636549 PHF23Q9BUL5 403 aaPredicted RBP23■■□□□ 1.27
CACNA1A-227ENST00000636549 DDRGK1Q96HY6 314 aa23■■□□□ 1.27
CACNA1A-227ENST00000636549 GOLGA6L6A8MZA4 724 aa22.99■■□□□ 1.27
CACNA1A-227ENST00000636549 PLEKHD1A6NEE1 506 aa22.99■■□□□ 1.27
CACNA1A-227ENST00000636549 SUPT16HQ9Y5B9 1047 aaKnown RBP22.97■■□□□ 1.27
CACNA1A-227ENST00000636549 HSP90B1P14625 803 aaKnown RBP22.97■■□□□ 1.27
CACNA1A-227ENST00000636549 NUTM2DQ5VT03 806 aaPredicted RBP22.96■■□□□ 1.27
CACNA1A-227ENST00000636549 NUTM2FA1L443 756 aa22.95■■□□□ 1.26
CACNA1A-227ENST00000636549 PNNQ9H307 717 aaKnown RBP22.94■■□□□ 1.26
CACNA1A-227ENST00000636549 RAD21O60216 631 aa22.94■■□□□ 1.26
CACNA1A-227ENST00000636549 NUDCQ9Y266 331 aa22.92■■□□□ 1.26
CACNA1A-227ENST00000636549 B4GALNT3Q6L9W6 998 aa22.91■■□□□ 1.26
CACNA1A-227ENST00000636549 AEBP2Q6ZN18 517 aaPredicted RBP22.9■■□□□ 1.26
CACNA1A-227ENST00000636549 RTF1Q92541 710 aaKnown RBP22.89■■□□□ 1.26
CACNA1A-227ENST00000636549 NOL8Q76FK4 1167 aaKnown RBP22.88■■□□□ 1.25
CACNA1A-227ENST00000636549 LTV1Q96GA3 475 aaPredicted RBP22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms