RNA–Protein interactions for RNA: ENST00000636518.1

LRRK2-208, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 5

Gene LRRK2, Length 2,477 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-208ENST00000636518 SUPT16HQ9Y5B9 1047 aaKnown RBP8.26□□□□□ -1.09
LRRK2-208ENST00000636518 MYO15BQ96JP2 1530 aa8.23□□□□□ -1.09
LRRK2-208ENST00000636518 RBM19Q9Y4C8 960 aaKnown RBP8.21□□□□□ -1.1
LRRK2-208ENST00000636518 NAP1L2Q9ULW6 460 aaPredicted RBP8.19□□□□□ -1.1
LRRK2-208ENST00000636518 FANCIQ9NVI1 1328 aa8.19□□□□□ -1.1
LRRK2-208ENST00000636518 MSH5O43196 834 aa8.18□□□□□ -1.1
LRRK2-208ENST00000636518 IL27Q8NEV9 243 aa8.18□□□□□ -1.1
LRRK2-208ENST00000636518 IPO4Q8TEX9 1081 aaKnown RBP8.14□□□□□ -1.11
LRRK2-208ENST00000636518 CCER1Q8TC90 406 aaPredicted RBP8.13□□□□□ -1.11
LRRK2-208ENST00000636518 YTHDC1Q96MU7 727 aaKnown RBP8.13□□□□□ -1.11
LRRK2-208ENST00000636518 FOXD4L1Q9NU39 408 aa8.12□□□□□ -1.11
LRRK2-208ENST00000636518 TMEM132AQ24JP5 1023 aa8.11□□□□□ -1.11
LRRK2-208ENST00000636518 HMGB1P09429 215 aaKnown RBP8.09□□□□□ -1.11
LRRK2-208ENST00000636518 C11orf95C9JLR9 678 aaPredicted RBP8.09□□□□□ -1.11
LRRK2-208ENST00000636518 TEX2Q8IWB9 1127 aa8.09□□□□□ -1.11
LRRK2-208ENST00000636518 BBXQ8WY36 941 aaPredicted RBP8.07□□□□□ -1.12
LRRK2-208ENST00000636518 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.07□□□□□ -1.12
LRRK2-208ENST00000636518 ZFP91Q96JP5 570 aaPredicted RBP8.07□□□□□ -1.12
LRRK2-208ENST00000636518 RRP9O43818 475 aaKnown RBP8.06□□□□□ -1.12
LRRK2-208ENST00000636518 CHRM1P11229 460 aaPredicted RBP8.06□□□□□ -1.12
LRRK2-208ENST00000636518 POLR3GLQ9BT43 218 aa8.06□□□□□ -1.12
LRRK2-208ENST00000636518 IRX6P78412 446 aaPredicted RBP8.05□□□□□ -1.12
LRRK2-208ENST00000636518 CHMP4BQ9H444 224 aaKnown RBP8.05□□□□□ -1.12
LRRK2-208ENST00000636518 FTSJ3Q8IY81 847 aaKnown RBP8.05□□□□□ -1.12
LRRK2-208ENST00000636518 SHROOM4Q9ULL8 1493 aa8.04□□□□□ -1.12
LRRK2-208ENST00000636518 NCLP19338 710 aaKnown RBP8.04□□□□□ -1.12
LRRK2-208ENST00000636518 TRIM41Q8WV44 630 aa8.03□□□□□ -1.12
LRRK2-208ENST00000636518 CCDC9Q9Y3X0 531 aaKnown RBP8.03□□□□□ -1.12
LRRK2-208ENST00000636518 CANXP27824 592 aaKnown RBP8.03□□□□□ -1.12
LRRK2-208ENST00000636518 HSP90AA2PQ14568 343 aaPredicted RBP8.02□□□□□ -1.13
LRRK2-208ENST00000636518 RTL5Q5HYW3 569 aaPredicted RBP8.02□□□□□ -1.13
LRRK2-208ENST00000636518 CNGB1Q14028 1251 aaPredicted RBP8.01□□□□□ -1.13
LRRK2-208ENST00000636518 GTF2E1P29083 439 aaPredicted RBP8.01□□□□□ -1.13
LRRK2-208ENST00000636518 SECISBP2LQ93073 1101 aaKnown RBP8.01□□□□□ -1.13
LRRK2-208ENST00000636518 TICAM2Q86XR7 235 aa7.99□□□□□ -1.13
LRRK2-208ENST00000636518 ARID4BQ4LE39 1312 aaPredicted RBP7.98□□□□□ -1.13
LRRK2-208ENST00000636518 CALD1Q05682 793 aaKnown RBP7.98□□□□□ -1.13
LRRK2-208ENST00000636518 SLC4A2P04920 1241 aa7.97□□□□□ -1.13
LRRK2-208ENST00000636518 STAC3Q96MF2 364 aa7.96□□□□□ -1.13
LRRK2-208ENST00000636518 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.96□□□□□ -1.13
LRRK2-208ENST00000636518 RNF216Q9NWF9 866 aaPredicted RBP7.96□□□□□ -1.14
LRRK2-208ENST00000636518 SUPT5HO00267 1087 aaKnown RBP7.95□□□□□ -1.14
LRRK2-208ENST00000636518 IGSF3O75054 1194 aa7.95□□□□□ -1.14
LRRK2-208ENST00000636518 UBTFP17480 764 aaKnown RBP7.95□□□□□ -1.14
LRRK2-208ENST00000636518 CNPY4Q8N129 248 aa7.95□□□□□ -1.14
LRRK2-208ENST00000636518 ARID3AQ99856 593 aa7.95□□□□□ -1.14
LRRK2-208ENST00000636518 PRDM4Q9UKN5 801 aa7.95□□□□□ -1.14
LRRK2-208ENST00000636518 PLCB2Q00722 1185 aa7.94□□□□□ -1.14
LRRK2-208ENST00000636518 FAM43AQ8N2R8 423 aa7.94□□□□□ -1.14
LRRK2-208ENST00000636518 WASHC2CQ9Y4E1 1318 aa7.93□□□□□ -1.14
LRRK2-208ENST00000636518 CLSTN1O94985 981 aa7.92□□□□□ -1.14
LRRK2-208ENST00000636518 CENPJQ9HC77 1338 aaPredicted RBP7.92□□□□□ -1.14
LRRK2-208ENST00000636518 ZNF316A6NFI3 1004 aaPredicted RBP7.91□□□□□ -1.14
LRRK2-208ENST00000636518 PPM1GO15355 546 aaPredicted RBP7.91□□□□□ -1.14
LRRK2-208ENST00000636518 NBR1Q14596 966 aa7.91□□□□□ -1.14
LRRK2-208ENST00000636518 PUS7Q96PZ0 661 aaKnown RBP7.91□□□□□ -1.14
LRRK2-208ENST00000636518 HSP90AA1P07900 732 aaKnown RBP7.9□□□□□ -1.14
LRRK2-208ENST00000636518 NOP58Q9Y2X3 529 aaKnown RBP7.9□□□□□ -1.14
LRRK2-208ENST00000636518 VGFO15240 615 aaPredicted RBP7.89□□□□□ -1.15
LRRK2-208ENST00000636518 FKBP8Q14318 412 aa7.89□□□□□ -1.15
LRRK2-208ENST00000636518 WWC1Q8IX03 1113 aa7.89□□□□□ -1.15
LRRK2-208ENST00000636518 MIER1Q8N108 512 aa7.89□□□□□ -1.15
LRRK2-208ENST00000636518 BRPF3Q9ULD4 1205 aa7.89□□□□□ -1.15
LRRK2-208ENST00000636518 PTMAP06454 111 aaKnown RBP7.88□□□□□ -1.15
LRRK2-208ENST00000636518 WASHC2AQ641Q2 1341 aa7.88□□□□□ -1.15
LRRK2-208ENST00000636518 PRDM10Q9NQV6 1147 aa7.88□□□□□ -1.15
LRRK2-208ENST00000636518 DNAJC5BQ9UF47 199 aa7.88□□□□□ -1.15
LRRK2-208ENST00000636518 ZNF592Q92610 1267 aa7.88□□□□□ -1.15
LRRK2-208ENST00000636518 USP35Q9P2H5 1018 aa7.88□□□□□ -1.15
LRRK2-208ENST00000636518 GRIPAP1Q4V328 841 aa7.87□□□□□ -1.15
LRRK2-208ENST00000636518 CFAP44Q96MT7 982 aa7.86□□□□□ -1.15
LRRK2-208ENST00000636518 NEFMP07197 916 aa7.86□□□□□ -1.15
LRRK2-208ENST00000636518 PTMSP20962 102 aa7.86□□□□□ -1.15
LRRK2-208ENST00000636518 RGS3P49796 1198 aa7.86□□□□□ -1.15
LRRK2-208ENST00000636518 PLCD4Q9BRC7 762 aa7.86□□□□□ -1.15
LRRK2-208ENST00000636518 CLGNO14967 610 aa7.85□□□□□ -1.15
LRRK2-208ENST00000636518 MCCP23508 829 aa7.85□□□□□ -1.15
LRRK2-208ENST00000636518 KCNG1Q9UIX4 513 aa7.85□□□□□ -1.15
LRRK2-208ENST00000636518 PSMD1Q99460 953 aa7.83□□□□□ -1.16
LRRK2-208ENST00000636518 FAM193AP78312 1265 aa7.82□□□□□ -1.16
LRRK2-208ENST00000636518 ANP32BQ92688 251 aaKnown RBP7.82□□□□□ -1.16
LRRK2-208ENST00000636518 RGS22Q8NE09 1264 aa7.81□□□□□ -1.16
LRRK2-208ENST00000636518 PDCL3Q9H2J4 239 aa7.8□□□□□ -1.16
LRRK2-208ENST00000636518 HOXD11P31277 338 aaPredicted RBP7.8□□□□□ -1.16
LRRK2-208ENST00000636518 NPM1P06748 294 aaKnown RBP eCLIP7.79□□□□□ -1.16
LRRK2-208ENST00000636518 ZNF622Q969S3 477 aaKnown RBP eCLIP7.79□□□□□ -1.16
LRRK2-208ENST00000636518 ZNF830Q96NB3 372 aaPredicted RBP7.79□□□□□ -1.16
LRRK2-208ENST00000636518 MMP14P50281 582 aa7.79□□□□□ -1.16
LRRK2-208ENST00000636518 DMRT2Q9Y5R5 561 aa7.79□□□□□ -1.16
LRRK2-208ENST00000636518 SETQ01105 290 aaPredicted RBP7.78□□□□□ -1.16
LRRK2-208ENST00000636518 AXDND1Q5T1B0 1012 aaPredicted RBP7.78□□□□□ -1.16
LRRK2-208ENST00000636518 TMED8Q6PL24 325 aaPredicted RBP7.78□□□□□ -1.16
LRRK2-208ENST00000636518 PLCD3Q8N3E9 789 aa7.78□□□□□ -1.16
LRRK2-208ENST00000636518 PATL2C9JE40 543 aaKnown RBP7.77□□□□□ -1.17
LRRK2-208ENST00000636518 IRX3P78415 501 aaPredicted RBP7.77□□□□□ -1.17
LRRK2-208ENST00000636518 TMEM51Q9NW97 253 aa7.77□□□□□ -1.17
LRRK2-208ENST00000636518 ATF5Q9Y2D1 282 aaPredicted RBP7.77□□□□□ -1.17
LRRK2-208ENST00000636518 PHF14O94880 888 aa7.76□□□□□ -1.17
LRRK2-208ENST00000636518 FAM43BQ6ZT52 329 aaPredicted RBP7.75□□□□□ -1.17
LRRK2-208ENST00000636518 HDAC5Q9UQL6 1122 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms