RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 TONSLQ96HA7 1378 aa23.16■■□□□ 1.3
CACNA1A-225ENST00000636389 GOLGA6L22H0YM25 854 aa23.15■■□□□ 1.3
CACNA1A-225ENST00000636389 PRM3Q9NNZ6 103 aa23.13■■□□□ 1.29
CACNA1A-225ENST00000636389 KDM2AQ9Y2K7 1162 aa23.12■■□□□ 1.29
CACNA1A-225ENST00000636389 BECN1Q14457 450 aa23.11■■□□□ 1.29
CACNA1A-225ENST00000636389 AMER1Q5JTC6 1135 aaPredicted RBP23.1■■□□□ 1.29
CACNA1A-225ENST00000636389 PLCB2Q00722 1185 aa23.1■■□□□ 1.29
CACNA1A-225ENST00000636389 CASC1Q6TDU7 716 aa23.1■■□□□ 1.29
CACNA1A-225ENST00000636389 NAP1L2Q9ULW6 460 aaPredicted RBP23.05■■□□□ 1.28
CACNA1A-225ENST00000636389 IRX6P78412 446 aaPredicted RBP23.04■■□□□ 1.28
CACNA1A-225ENST00000636389 GOLGA2Q08379 1002 aa23.03■■□□□ 1.28
CACNA1A-225ENST00000636389 PPP1R15AO75807 674 aaPredicted RBP23.03■■□□□ 1.28
CACNA1A-225ENST00000636389 DDX10Q13206 875 aaKnown RBP23.03■■□□□ 1.28
CACNA1A-225ENST00000636389 ACIN1Q9UKV3 1341 aaKnown RBP23.02■■□□□ 1.28
CACNA1A-225ENST00000636389 PPM1GO15355 546 aaPredicted RBP22.99■■□□□ 1.27
CACNA1A-225ENST00000636389 GOLGA6L6A8MZA4 724 aa22.98■■□□□ 1.27
CACNA1A-225ENST00000636389 ISY1Q9ULR0 285 aaKnown RBP22.97■■□□□ 1.27
CACNA1A-225ENST00000636389 FGD1P98174 961 aa22.96■■□□□ 1.27
CACNA1A-225ENST00000636389 LAS1LQ9Y4W2 734 aaKnown RBP22.94■■□□□ 1.26
CACNA1A-225ENST00000636389 LMOD2Q6P5Q4 547 aa22.94■■□□□ 1.26
CACNA1A-225ENST00000636389 DDRGK1Q96HY6 314 aa22.94■■□□□ 1.26
CACNA1A-225ENST00000636389 NAP1L5Q96NT1 182 aaPredicted RBP22.92■■□□□ 1.26
CACNA1A-225ENST00000636389 ANP32EQ9BTT0 268 aa22.91■■□□□ 1.26
CACNA1A-225ENST00000636389 CHIC2Q9UKJ5 165 aa22.9■■□□□ 1.26
CACNA1A-225ENST00000636389 ARID4BQ4LE39 1312 aaPredicted RBP22.9■■□□□ 1.26
CACNA1A-225ENST00000636389 FTSJ3Q8IY81 847 aaKnown RBP22.89■■□□□ 1.25
CACNA1A-225ENST00000636389 MRS2Q9HD23 443 aa22.87■■□□□ 1.25
CACNA1A-225ENST00000636389 OS9Q13438 667 aaPredicted RBP22.87■■□□□ 1.25
CACNA1A-225ENST00000636389 KCNJ4P48050 445 aa22.84■■□□□ 1.25
CACNA1A-225ENST00000636389 NOC3LQ8WTT2 800 aaKnown RBP22.81■■□□□ 1.24
CACNA1A-225ENST00000636389 SENP3-EIF4A1A0A087X0R7 540 aa22.79■■□□□ 1.24
CACNA1A-225ENST00000636389 NRDCO43847 1150 aa22.79■■□□□ 1.24
CACNA1A-225ENST00000636389 ABCC9O60706 1549 aa22.77■■□□□ 1.24
CACNA1A-225ENST00000636389 DRC7Q8IY82 874 aa22.75■■□□□ 1.23
CACNA1A-225ENST00000636389 KIAA2012Q0VF49 1180 aa22.74■■□□□ 1.23
CACNA1A-225ENST00000636389 PDE4CQ08493 712 aa22.74■■□□□ 1.23
CACNA1A-225ENST00000636389 RTN4Q9NQC3 1192 aaKnown RBP22.74■■□□□ 1.23
CACNA1A-225ENST00000636389 HSP90AB1P08238 724 aaKnown RBP22.73■■□□□ 1.23
CACNA1A-225ENST00000636389 CHAF1AQ13111 956 aaPredicted RBP22.72■■□□□ 1.23
CACNA1A-225ENST00000636389 ERICH6BQ5W0A0 696 aa22.71■■□□□ 1.23
CACNA1A-225ENST00000636389 GOLGA6L4A6NEF3 574 aa22.7■■□□□ 1.22
CACNA1A-225ENST00000636389 PNNQ9H307 717 aaKnown RBP22.7■■□□□ 1.22
CACNA1A-225ENST00000636389 HIRIP3Q9BW71 556 aaPredicted RBP22.69■■□□□ 1.22
CACNA1A-225ENST00000636389 GNL2Q13823 731 aaKnown RBP22.68■■□□□ 1.22
CACNA1A-225ENST00000636389 TSPY4P0CV99 314 aa22.67■■□□□ 1.22
CACNA1A-225ENST00000636389 TSPY10P0CW01 314 aa22.67■■□□□ 1.22
CACNA1A-225ENST00000636389 CFAP53Q96M91 514 aa22.67■■□□□ 1.22
CACNA1A-225ENST00000636389 NEUROD2Q15784 382 aa22.66■■□□□ 1.22
CACNA1A-225ENST00000636389 L1TD1Q5T7N2 865 aaKnown RBP22.65■■□□□ 1.22
CACNA1A-225ENST00000636389 KRI1Q8N9T8 703 aaKnown RBP22.65■■□□□ 1.22
CACNA1A-225ENST00000636389 ANO8Q9HCE9 1232 aaPredicted RBP22.65■■□□□ 1.22
CACNA1A-225ENST00000636389 A0A0U1RQG5 324 aaPredicted RBP22.59■■□□□ 1.21
CACNA1A-225ENST00000636389 MAPK8IP3Q9UPT6 1336 aa22.58■■□□□ 1.21
CACNA1A-225ENST00000636389 FBXO3Q9UK99 471 aa22.58■■□□□ 1.21
CACNA1A-225ENST00000636389 KCNH8Q96L42 1107 aa22.57■■□□□ 1.2
CACNA1A-225ENST00000636389 RGL3Q3MIN7 710 aa22.56■■□□□ 1.2
CACNA1A-225ENST00000636389 FRAT1Q92837 279 aaPredicted RBP22.54■■□□□ 1.2
CACNA1A-225ENST00000636389 MSNP26038 577 aaKnown RBP22.54■■□□□ 1.2
CACNA1A-225ENST00000636389 KNSTRNQ9Y448 316 aa22.53■■□□□ 1.2
CACNA1A-225ENST00000636389 RGS3P49796 1198 aa22.52■■□□□ 1.2
CACNA1A-225ENST00000636389 ARID3AQ99856 593 aa22.5■■□□□ 1.19
CACNA1A-225ENST00000636389 SOX12O15370 315 aa22.5■■□□□ 1.19
CACNA1A-225ENST00000636389 SPRYD3Q8NCJ5 442 aa22.49■■□□□ 1.19
CACNA1A-225ENST00000636389 TMX4Q9H1E5 349 aaPredicted RBP22.49■■□□□ 1.19
CACNA1A-225ENST00000636389 EIF4G2P78344 907 aaKnown RBP eCLIP22.47■■□□□ 1.19
CACNA1A-225ENST00000636389 POGKQ9P215 609 aa22.46■■□□□ 1.19
CACNA1A-225ENST00000636389 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.45■■□□□ 1.18
CACNA1A-225ENST00000636389 U2SURPO15042 1029 aaKnown RBP22.43■■□□□ 1.18
CACNA1A-225ENST00000636389 MCCP23508 829 aa22.42■■□□□ 1.18
CACNA1A-225ENST00000636389 ZNF330Q9Y3S2 320 aaPredicted RBP22.41■■□□□ 1.18
CACNA1A-225ENST00000636389 CHMP7Q8WUX9 453 aaPredicted RBP22.41■■□□□ 1.18
CACNA1A-225ENST00000636389 HSCBQ8IWL3 235 aa22.39■■□□□ 1.18
CACNA1A-225ENST00000636389 NUDCQ9Y266 331 aa22.39■■□□□ 1.18
CACNA1A-225ENST00000636389 CREBRFQ8IUR6 639 aa22.39■■□□□ 1.17
CACNA1A-225ENST00000636389 RRP7BPQ9NSQ0 103 aa22.38■■□□□ 1.17
CACNA1A-225ENST00000636389 G3V3G9 751 aa22.37■■□□□ 1.17
CACNA1A-225ENST00000636389 DCAF8Q5TAQ9 597 aa22.37■■□□□ 1.17
CACNA1A-225ENST00000636389 CSRNP3Q8WYN3 585 aa22.37■■□□□ 1.17
CACNA1A-225ENST00000636389 MTUS2Q5JR59 1369 aa22.37■■□□□ 1.17
CACNA1A-225ENST00000636389 TNNT3P45378 269 aaPredicted RBP22.36■■□□□ 1.17
CACNA1A-225ENST00000636389 CHMP4BQ9H444 224 aaKnown RBP22.34■■□□□ 1.17
CACNA1A-225ENST00000636389 VPS53Q5VIR6 699 aa22.33■■□□□ 1.17
CACNA1A-225ENST00000636389 CDCA8Q53HL2 280 aa22.33■■□□□ 1.17
CACNA1A-225ENST00000636389 WWC1Q8IX03 1113 aa22.33■■□□□ 1.16
CACNA1A-225ENST00000636389 GOLGA6L1Q8N7Z2 621 aa22.32■■□□□ 1.16
CACNA1A-225ENST00000636389 HSP90B1P14625 803 aaKnown RBP22.31■■□□□ 1.16
CACNA1A-225ENST00000636389 APBB1O00213 710 aa22.31■■□□□ 1.16
CACNA1A-225ENST00000636389 CEP89Q96ST8 783 aa22.3■■□□□ 1.16
CACNA1A-225ENST00000636389 KIAA1211Q6ZU35 1233 aa22.29■■□□□ 1.16
CACNA1A-225ENST00000636389 SUPT16HQ9Y5B9 1047 aaKnown RBP22.29■■□□□ 1.16
CACNA1A-225ENST00000636389 TRHP20396 242 aaPredicted RBP22.29■■□□□ 1.16
CACNA1A-225ENST00000636389 CC2D1BQ5T0F9 858 aaKnown RBP22.29■■□□□ 1.16
CACNA1A-225ENST00000636389 RASSF8Q8NHQ8 419 aa22.27■■□□□ 1.16
CACNA1A-225ENST00000636389 CCDC9Q9Y3X0 531 aaKnown RBP22.25■■□□□ 1.15
CACNA1A-225ENST00000636389 CNKSR2Q8WXI2 1034 aa22.25■■□□□ 1.15
CACNA1A-225ENST00000636389 CHMP3Q9Y3E7 222 aa22.24■■□□□ 1.15
CACNA1A-225ENST00000636389 RTF1Q92541 710 aaKnown RBP22.24■■□□□ 1.15
CACNA1A-225ENST00000636389 TPM4P67936 248 aa22.22■■□□□ 1.15
CACNA1A-225ENST00000636389 MS4A1P11836 297 aa22.21■■□□□ 1.15
CACNA1A-225ENST00000636389 PAK3O75914 559 aaPredicted RBP22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms