RNA–Protein interactions for RNA: ENST00000635832.1

GABRB3-217, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-217ENST00000635832 NPHP1O15259 732 aa12.79□□□□□ -0.36
GABRB3-217ENST00000635832 MTUS2Q5JR59 1369 aa12.78□□□□□ -0.36
GABRB3-217ENST00000635832 GOLGA6L22H0YM25 854 aa12.78□□□□□ -0.36
GABRB3-217ENST00000635832 ANP32EQ9BTT0 268 aa12.77□□□□□ -0.36
GABRB3-217ENST00000635832 CASC1Q6TDU7 716 aa12.77□□□□□ -0.37
GABRB3-217ENST00000635832 CDCA8Q53HL2 280 aa12.77□□□□□ -0.37
GABRB3-217ENST00000635832 BECN1Q14457 450 aa12.76□□□□□ -0.37
GABRB3-217ENST00000635832 MRS2Q9HD23 443 aa12.76□□□□□ -0.37
GABRB3-217ENST00000635832 DDX10Q13206 875 aaKnown RBP12.76□□□□□ -0.37
GABRB3-217ENST00000635832 PLEKHD1A6NEE1 506 aa12.73□□□□□ -0.37
GABRB3-217ENST00000635832 KCNH8Q96L42 1107 aa12.72□□□□□ -0.37
GABRB3-217ENST00000635832 TULP1O00294 542 aaPredicted RBP12.7□□□□□ -0.38
GABRB3-217ENST00000635832 DDRGK1Q96HY6 314 aa12.7□□□□□ -0.38
GABRB3-217ENST00000635832 EIF4G2P78344 907 aaKnown RBP eCLIP12.68□□□□□ -0.38
GABRB3-217ENST00000635832 TRIM44Q96DX7 344 aaPredicted RBP12.68□□□□□ -0.38
GABRB3-217ENST00000635832 LMOD2Q6P5Q4 547 aa12.68□□□□□ -0.38
GABRB3-217ENST00000635832 CHMP4BQ9H444 224 aaKnown RBP12.67□□□□□ -0.38
GABRB3-217ENST00000635832 NUDCQ9Y266 331 aa12.67□□□□□ -0.38
GABRB3-217ENST00000635832 GOLGA2Q08379 1002 aa12.66□□□□□ -0.38
GABRB3-217ENST00000635832 MAPK8IP3Q9UPT6 1336 aa12.66□□□□□ -0.38
GABRB3-217ENST00000635832 RSF1Q96T23 1441 aaPredicted RBP12.66□□□□□ -0.38
GABRB3-217ENST00000635832 SCRIBQ14160 1630 aa12.65□□□□□ -0.38
GABRB3-217ENST00000635832 KNSTRNQ9Y448 316 aa12.65□□□□□ -0.38
GABRB3-217ENST00000635832 PPM1GO15355 546 aaPredicted RBP12.64□□□□□ -0.39
GABRB3-217ENST00000635832 SENP3Q9H4L4 574 aaPredicted RBP12.64□□□□□ -0.39
GABRB3-217ENST00000635832 FTSJ3Q8IY81 847 aaKnown RBP12.64□□□□□ -0.39
GABRB3-217ENST00000635832 PTMAP06454 111 aaKnown RBP12.64□□□□□ -0.39
GABRB3-217ENST00000635832 POGKQ9P215 609 aa12.64□□□□□ -0.39
GABRB3-217ENST00000635832 HDGFP51858 240 aaKnown RBP12.63□□□□□ -0.39
GABRB3-217ENST00000635832 GOLGA6L6A8MZA4 724 aa12.63□□□□□ -0.39
GABRB3-217ENST00000635832 PNNQ9H307 717 aaKnown RBP12.62□□□□□ -0.39
GABRB3-217ENST00000635832 OS9Q13438 667 aaPredicted RBP12.6□□□□□ -0.39
GABRB3-217ENST00000635832 NBR1Q14596 966 aa12.6□□□□□ -0.39
GABRB3-217ENST00000635832 FGD1P98174 961 aa12.6□□□□□ -0.39
GABRB3-217ENST00000635832 TNNT2P45379 298 aaPredicted RBP12.6□□□□□ -0.39
GABRB3-217ENST00000635832 NRDCO43847 1150 aa12.59□□□□□ -0.39
GABRB3-217ENST00000635832 MS4A1P11836 297 aa12.59□□□□□ -0.39
GABRB3-217ENST00000635832 RGL3Q3MIN7 710 aa12.59□□□□□ -0.39
GABRB3-217ENST00000635832 RRP7BPQ9NSQ0 103 aa12.58□□□□□ -0.4
GABRB3-217ENST00000635832 LAS1LQ9Y4W2 734 aaKnown RBP12.57□□□□□ -0.4
GABRB3-217ENST00000635832 CFDP1Q9UEE9 299 aaPredicted RBP12.56□□□□□ -0.4
GABRB3-217ENST00000635832 KCNJ4P48050 445 aa12.55□□□□□ -0.4
GABRB3-217ENST00000635832 DNTTIP2Q5QJE6 756 aaKnown RBP12.55□□□□□ -0.4
GABRB3-217ENST00000635832 CLSTN1O94985 981 aa12.54□□□□□ -0.4
GABRB3-217ENST00000635832 TRHP20396 242 aaPredicted RBP12.54□□□□□ -0.4
GABRB3-217ENST00000635832 L1TD1Q5T7N2 865 aaKnown RBP12.52□□□□□ -0.4
GABRB3-217ENST00000635832 TMX4Q9H1E5 349 aaPredicted RBP12.52□□□□□ -0.41
GABRB3-217ENST00000635832 CARD11Q9BXL7 1154 aa12.51□□□□□ -0.41
GABRB3-217ENST00000635832 NAP1L2Q9ULW6 460 aaPredicted RBP12.51□□□□□ -0.41
GABRB3-217ENST00000635832 ISY1Q9ULR0 285 aaKnown RBP12.5□□□□□ -0.41
GABRB3-217ENST00000635832 KANK1Q14678 1352 aa12.5□□□□□ -0.41
GABRB3-217ENST00000635832 TAOK2Q9UL54 1235 aa12.49□□□□□ -0.41
GABRB3-217ENST00000635832 GOLGA6L4A6NEF3 574 aa12.48□□□□□ -0.41
GABRB3-217ENST00000635832 CLIP1P30622 1438 aa12.48□□□□□ -0.41
GABRB3-217ENST00000635832 NEUROD2Q15784 382 aa12.48□□□□□ -0.41
GABRB3-217ENST00000635832 CFAP44Q96MT7 982 aa12.48□□□□□ -0.41
GABRB3-217ENST00000635832 TPRNQ4KMQ1 711 aa12.48□□□□□ -0.41
GABRB3-217ENST00000635832 NCBP3Q53F19 620 aaKnown RBP12.47□□□□□ -0.41
GABRB3-217ENST00000635832 U2SURPO15042 1029 aaKnown RBP12.46□□□□□ -0.41
GABRB3-217ENST00000635832 MCCP23508 829 aa12.46□□□□□ -0.41
GABRB3-217ENST00000635832 IRX6P78412 446 aaPredicted RBP12.46□□□□□ -0.42
GABRB3-217ENST00000635832 PLCB2Q00722 1185 aa12.45□□□□□ -0.42
GABRB3-217ENST00000635832 HSP90AB1P08238 724 aaKnown RBP12.44□□□□□ -0.42
GABRB3-217ENST00000635832 ERCC6Q03468 1493 aa12.44□□□□□ -0.42
GABRB3-217ENST00000635832 RTF1Q92541 710 aaKnown RBP12.43□□□□□ -0.42
GABRB3-217ENST00000635832 CHMP4AQ9BY43 222 aa12.43□□□□□ -0.42
GABRB3-217ENST00000635832 CHAF1AQ13111 956 aaPredicted RBP12.43□□□□□ -0.42
GABRB3-217ENST00000635832 FRAT1Q92837 279 aaPredicted RBP12.43□□□□□ -0.42
GABRB3-217ENST00000635832 KIAA2012Q0VF49 1180 aa12.41□□□□□ -0.42
GABRB3-217ENST00000635832 GNL2Q13823 731 aaKnown RBP12.41□□□□□ -0.42
GABRB3-217ENST00000635832 HIRIP3Q9BW71 556 aaPredicted RBP12.41□□□□□ -0.42
GABRB3-217ENST00000635832 ERICH6BQ5W0A0 696 aa12.41□□□□□ -0.42
GABRB3-217ENST00000635832 ZCCHC6Q5VYS8 1495 aaKnown RBP12.41□□□□□ -0.42
GABRB3-217ENST00000635832 TMF1P82094 1093 aa12.4□□□□□ -0.42
GABRB3-217ENST00000635832 EEA1Q15075 1411 aa12.4□□□□□ -0.43
GABRB3-217ENST00000635832 SRPK2P78362 688 aaKnown RBP12.39□□□□□ -0.43
GABRB3-217ENST00000635832 MLECQ14165 292 aa12.39□□□□□ -0.43
GABRB3-217ENST00000635832 CSB-PGBD3P0DP91 1061 aa12.38□□□□□ -0.43
GABRB3-217ENST00000635832 DCAF1Q9Y4B6 1507 aa12.37□□□□□ -0.43
GABRB3-217ENST00000635832 HDGFL2Q7Z4V5 671 aaPredicted RBP12.37□□□□□ -0.43
GABRB3-217ENST00000635832 HSCBQ8IWL3 235 aa12.36□□□□□ -0.43
GABRB3-217ENST00000635832 CALD1Q05682 793 aaKnown RBP12.35□□□□□ -0.43
GABRB3-217ENST00000635832 CCNB3Q8WWL7 1395 aa12.35□□□□□ -0.43
GABRB3-217ENST00000635832 SOX12O15370 315 aa12.35□□□□□ -0.43
GABRB3-217ENST00000635832 RGS3P49796 1198 aa12.35□□□□□ -0.43
GABRB3-217ENST00000635832 GOLGA3Q08378 1498 aa12.35□□□□□ -0.43
GABRB3-217ENST00000635832 KIAA1211Q6ZU35 1233 aa12.35□□□□□ -0.43
GABRB3-217ENST00000635832 HDAC5Q9UQL6 1122 aa12.34□□□□□ -0.43
GABRB3-217ENST00000635832 KIF27Q86VH2 1401 aa12.34□□□□□ -0.43
GABRB3-217ENST00000635832 MORC1Q86VD1 984 aa12.34□□□□□ -0.43
GABRB3-217ENST00000635832 G3V3G9 751 aa12.34□□□□□ -0.43
GABRB3-217ENST00000635832 DCAF8Q5TAQ9 597 aa12.34□□□□□ -0.43
GABRB3-217ENST00000635832 CCDC9Q9Y3X0 531 aaKnown RBP12.34□□□□□ -0.43
GABRB3-217ENST00000635832 HTATSF1O43719 755 aaKnown RBP12.34□□□□□ -0.43
GABRB3-217ENST00000635832 PRM3Q9NNZ6 103 aa12.33□□□□□ -0.44
GABRB3-217ENST00000635832 CC2D1BQ5T0F9 858 aaKnown RBP12.33□□□□□ -0.44
GABRB3-217ENST00000635832 CCDC34Q96HJ3 373 aa12.33□□□□□ -0.44
GABRB3-217ENST00000635832 IPO8O15397 1037 aaKnown RBP12.32□□□□□ -0.44
GABRB3-217ENST00000635832 DRC7Q8IY82 874 aa12.31□□□□□ -0.44
GABRB3-217ENST00000635832 PAK3O75914 559 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms