RNA–Protein interactions for RNA: ENST00000635786.1

CACNA1A-217, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,840 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-217ENST00000635786 NEUROD2Q15784 382 aa15.55■□□□□ 0.08
CACNA1A-217ENST00000635786 ZBTB7CA1YPR0 619 aa15.52■□□□□ 0.08
CACNA1A-217ENST00000635786 NACADO15069 1562 aa15.49■□□□□ 0.07
CACNA1A-217ENST00000635786 CDK11BP21127 795 aaKnown RBP15.49■□□□□ 0.07
CACNA1A-217ENST00000635786 CDK11AQ9UQ88 783 aaPredicted RBP15.49■□□□□ 0.07
CACNA1A-217ENST00000635786 ZMYND15Q9H091 742 aa15.49■□□□□ 0.07
CACNA1A-217ENST00000635786 ZNF428Q96B54 188 aa15.48■□□□□ 0.07
CACNA1A-217ENST00000635786 CENPBP07199 599 aaPredicted RBP15.47■□□□□ 0.07
CACNA1A-217ENST00000635786 NEUROD1Q13562 356 aa15.47■□□□□ 0.07
CACNA1A-217ENST00000635786 SAMD1Q6SPF0 538 aaPredicted RBP15.46■□□□□ 0.07
CACNA1A-217ENST00000635786 RSPH6AQ9H0K4 717 aa15.44■□□□□ 0.06
CACNA1A-217ENST00000635786 SCRIBQ14160 1630 aa15.43■□□□□ 0.06
CACNA1A-217ENST00000635786 PDIA4P13667 645 aaKnown RBP15.41■□□□□ 0.06
CACNA1A-217ENST00000635786 LMOD2Q6P5Q4 547 aa15.39■□□□□ 0.05
CACNA1A-217ENST00000635786 SPDYE4A6NLX3 237 aa15.38■□□□□ 0.05
CACNA1A-217ENST00000635786 RB1CC1Q8TDY2 1594 aa15.36■□□□□ 0.05
CACNA1A-217ENST00000635786 DHX37Q8IY37 1157 aaKnown RBP15.35■□□□□ 0.05
CACNA1A-217ENST00000635786 KCTD17Q8N5Z5 321 aa15.3■□□□□ 0.04
CACNA1A-217ENST00000635786 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.29■□□□□ 0.04
CACNA1A-217ENST00000635786 APBB1O00213 710 aa15.29■□□□□ 0.04
CACNA1A-217ENST00000635786 RAD21O60216 631 aa15.28■□□□□ 0.04
CACNA1A-217ENST00000635786 SLC24A3Q9HC58 644 aa15.27■□□□□ 0.04
CACNA1A-217ENST00000635786 RNF216Q9NWF9 866 aaPredicted RBP15.24■□□□□ 0.03
CACNA1A-217ENST00000635786 HSP90B1P14625 803 aaKnown RBP15.24■□□□□ 0.03
CACNA1A-217ENST00000635786 FOXD4L5Q5VV16 416 aaPredicted RBP15.23■□□□□ 0.03
CACNA1A-217ENST00000635786 DIEXFQ68CQ4 756 aaKnown RBP15.23■□□□□ 0.03
CACNA1A-217ENST00000635786 FOXD4L4Q8WXT5 416 aaPredicted RBP15.23■□□□□ 0.03
CACNA1A-217ENST00000635786 PROM2Q8N271 834 aa15.22■□□□□ 0.03
CACNA1A-217ENST00000635786 MTMR7Q9Y216 660 aa15.22■□□□□ 0.03
CACNA1A-217ENST00000635786 RBM25P49756 843 aaKnown RBP15.16■□□□□ 0.02
CACNA1A-217ENST00000635786 NKX1-1Q15270 411 aaPredicted RBP15.15■□□□□ 0.02
CACNA1A-217ENST00000635786 RGS22Q8NE09 1264 aa15.14■□□□□ 0.01
CACNA1A-217ENST00000635786 SPOCK2Q92563 424 aa15.14■□□□□ 0.01
CACNA1A-217ENST00000635786 CCER1Q8TC90 406 aaPredicted RBP15.12■□□□□ 0.01
CACNA1A-217ENST00000635786 ZC3H15Q8WU90 426 aaKnown RBP15.09■□□□□ 0.01
CACNA1A-217ENST00000635786 UNC13AQ9UPW8 1703 aa15.08■□□□□ 0.01
CACNA1A-217ENST00000635786 AEBP1Q8IUX7 1158 aa15.07■□□□□ 0
CACNA1A-217ENST00000635786 TRIM41Q8WV44 630 aa15.07■□□□□ 0
CACNA1A-217ENST00000635786 GPBP1L1Q9HC44 474 aaPredicted RBP15.07■□□□□ 0
CACNA1A-217ENST00000635786 PUS7Q96PZ0 661 aaKnown RBP15.06■□□□□ 0
CACNA1A-217ENST00000635786 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.05■□□□□ -0
CACNA1A-217ENST00000635786 IL27Q8NEV9 243 aa15.05■□□□□ -0
CACNA1A-217ENST00000635786 HMGB1P09429 215 aaKnown RBP15.04■□□□□ -0
CACNA1A-217ENST00000635786 PABPN1Q86U42 306 aaKnown RBP eCLIP15.04■□□□□ -0
CACNA1A-217ENST00000635786 CCDC82Q8N4S0 544 aa15.04■□□□□ -0
CACNA1A-217ENST00000635786 CECR2Q9BXF3 1484 aa15.02□□□□□ -0.01
CACNA1A-217ENST00000635786 MKRN3Q13064 507 aaKnown RBP15.02□□□□□ -0.01
CACNA1A-217ENST00000635786 KCNV2Q8TDN2 545 aa15.01□□□□□ -0.01
CACNA1A-217ENST00000635786 GTPBP6O43824 516 aaPredicted RBP14.99□□□□□ -0.01
CACNA1A-217ENST00000635786 RSF1Q96T23 1441 aaPredicted RBP14.98□□□□□ -0.01
CACNA1A-217ENST00000635786 POLR3GLQ9BT43 218 aa14.98□□□□□ -0.01
CACNA1A-217ENST00000635786 FAM9AQ8IZU1 332 aaPredicted RBP14.96□□□□□ -0.01
CACNA1A-217ENST00000635786 BICRAQ9NZM4 1560 aa14.96□□□□□ -0.01
CACNA1A-217ENST00000635786 ZNF316A6NFI3 1004 aaPredicted RBP14.95□□□□□ -0.02
CACNA1A-217ENST00000635786 MKRN4PQ13434 485 aaPredicted RBP14.95□□□□□ -0.02
CACNA1A-217ENST00000635786 UBE2Q2Q8WVN8 375 aa14.95□□□□□ -0.02
CACNA1A-217ENST00000635786 HS6ST3Q8IZP7 471 aa14.94□□□□□ -0.02
CACNA1A-217ENST00000635786 CLSPNQ9HAW4 1339 aa14.94□□□□□ -0.02
CACNA1A-217ENST00000635786 USP35Q9P2H5 1018 aa14.91□□□□□ -0.02
CACNA1A-217ENST00000635786 BRD2P25440 801 aaKnown RBP14.91□□□□□ -0.02
CACNA1A-217ENST00000635786 MROH2BQ7Z745 1585 aa14.9□□□□□ -0.02
CACNA1A-217ENST00000635786 MFAP1P55081 439 aaKnown RBP14.88□□□□□ -0.03
CACNA1A-217ENST00000635786 CIZ1Q9ULV3 898 aaPredicted RBP14.87□□□□□ -0.03
CACNA1A-217ENST00000635786 RNF25Q96BH1 459 aaPredicted RBP14.85□□□□□ -0.03
CACNA1A-217ENST00000635786 TMCO4Q5TGY1 634 aa14.85□□□□□ -0.03
CACNA1A-217ENST00000635786 YTHDC1Q96MU7 727 aaKnown RBP14.84□□□□□ -0.03
CACNA1A-217ENST00000635786 BCL11AQ9H165 835 aa14.84□□□□□ -0.03
CACNA1A-217ENST00000635786 ANP32EQ9BTT0 268 aa14.83□□□□□ -0.04
CACNA1A-217ENST00000635786 GZF1Q9H116 711 aaPredicted RBP14.83□□□□□ -0.04
CACNA1A-217ENST00000635786 WRNQ14191 1432 aaPredicted RBP eCLIP14.8□□□□□ -0.04
CACNA1A-217ENST00000635786 P3H3Q8IVL6 736 aa14.79□□□□□ -0.04
CACNA1A-217ENST00000635786 BAZ1AQ9NRL2 1556 aaPredicted RBP14.79□□□□□ -0.04
CACNA1A-217ENST00000635786 WDR70Q9NW82 654 aa14.79□□□□□ -0.04
CACNA1A-217ENST00000635786 MIER1Q8N108 512 aa14.78□□□□□ -0.04
CACNA1A-217ENST00000635786 WIZO95785 1651 aa14.77□□□□□ -0.04
CACNA1A-217ENST00000635786 ZNF692Q9BU19 519 aaPredicted RBP14.77□□□□□ -0.05
CACNA1A-217ENST00000635786 CLUAP1Q96AJ1 413 aa14.76□□□□□ -0.05
CACNA1A-217ENST00000635786 FAM177A1Q8N128 213 aaPredicted RBP14.75□□□□□ -0.05
CACNA1A-217ENST00000635786 SMARCA4P51532 1647 aa14.73□□□□□ -0.05
CACNA1A-217ENST00000635786 PDE4CQ08493 712 aa14.71□□□□□ -0.05
CACNA1A-217ENST00000635786 ZNF219Q9P2Y4 722 aaPredicted RBP14.7□□□□□ -0.06
CACNA1A-217ENST00000635786 TRAIPQ9BWF2 469 aa14.68□□□□□ -0.06
CACNA1A-217ENST00000635786 SUPT16HQ9Y5B9 1047 aaKnown RBP14.68□□□□□ -0.06
CACNA1A-217ENST00000635786 SEMA3EO15041 775 aa14.67□□□□□ -0.06
CACNA1A-217ENST00000635786 E9PSI1 815 aa14.67□□□□□ -0.06
CACNA1A-217ENST00000635786 HOXD11P31277 338 aaPredicted RBP14.67□□□□□ -0.06
CACNA1A-217ENST00000635786 ZMYND10O75800 440 aa14.65□□□□□ -0.06
CACNA1A-217ENST00000635786 CADPS2Q86UW7 1296 aa14.65□□□□□ -0.06
CACNA1A-217ENST00000635786 KDM4CQ9H3R0 1056 aa14.65□□□□□ -0.06
CACNA1A-217ENST00000635786 IRF5Q13568 498 aa14.64□□□□□ -0.07
CACNA1A-217ENST00000635786 RETREG2Q8NC44 543 aa14.61□□□□□ -0.07
CACNA1A-217ENST00000635786 CWC22Q9HCG8 908 aaKnown RBP14.61□□□□□ -0.07
CACNA1A-217ENST00000635786 PLCD3Q8N3E9 789 aa14.59□□□□□ -0.07
CACNA1A-217ENST00000635786 POLA2Q14181 598 aa14.58□□□□□ -0.08
CACNA1A-217ENST00000635786 PPM1GO15355 546 aaPredicted RBP14.57□□□□□ -0.08
CACNA1A-217ENST00000635786 ZNF777Q9ULD5 760 aaPredicted RBP14.56□□□□□ -0.08
CACNA1A-217ENST00000635786 CEP162Q5TB80 1403 aa14.55□□□□□ -0.08
CACNA1A-217ENST00000635786 IRX6P78412 446 aaPredicted RBP14.55□□□□□ -0.08
CACNA1A-217ENST00000635786 TOP2AP11388 1531 aaKnown RBP14.55□□□□□ -0.08
CACNA1A-217ENST00000635786 FBXW7Q969H0 707 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms