RNA–Protein interactions for RNA: ENST00000635702.1

LINC01709-202, Transcript of long intergenic non-protein coding RNA 1709, humanhuman

TSL 5 BASIC

Gene LINC01709, Length 1,204 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01709-202ENST00000635702 METRNQ9UJH8 293 aa16.61■□□□□ 0.25
LINC01709-202ENST00000635702 TSPYL2Q9H2G4 693 aaPredicted RBP16.59■□□□□ 0.25
LINC01709-202ENST00000635702 POTEJP0CG39 1038 aa16.58■□□□□ 0.24
LINC01709-202ENST00000635702 SLC39A7Q92504 469 aa16.57■□□□□ 0.24
LINC01709-202ENST00000635702 C7P10643 843 aa16.56■□□□□ 0.24
LINC01709-202ENST00000635702 PLSCR2Q9NRY7 297 aa16.56■□□□□ 0.24
LINC01709-202ENST00000635702 KIF12Q96FN5 646 aa16.53■□□□□ 0.24
LINC01709-202ENST00000635702 ATN1P54259 1190 aaPredicted RBP16.5■□□□□ 0.23
LINC01709-202ENST00000635702 POTEMA6NI47 508 aa16.47■□□□□ 0.23
LINC01709-202ENST00000635702 TRPC6Q9Y210 931 aa16.44■□□□□ 0.22
LINC01709-202ENST00000635702 POTEGQ6S5H5 508 aa16.42■□□□□ 0.22
LINC01709-202ENST00000635702 RASEFQ8IZ41 740 aa16.42■□□□□ 0.22
LINC01709-202ENST00000635702 BMP2KQ9NSY1 1161 aaPredicted RBP16.42■□□□□ 0.22
LINC01709-202ENST00000635702 POTEFA5A3E0 1075 aa16.4■□□□□ 0.22
LINC01709-202ENST00000635702 MAP3K13O43283 966 aa16.39■□□□□ 0.21
LINC01709-202ENST00000635702 MAMSTRQ6ZN01 415 aa16.39■□□□□ 0.21
LINC01709-202ENST00000635702 MIER1Q8N108 512 aa16.39■□□□□ 0.21
LINC01709-202ENST00000635702 TIE1P35590 1138 aa16.35■□□□□ 0.21
LINC01709-202ENST00000635702 PLEKHG5O94827 1062 aa16.33■□□□□ 0.2
LINC01709-202ENST00000635702 LCE2DQ5TA82 110 aaPredicted RBP16.33■□□□□ 0.2
LINC01709-202ENST00000635702 SCUBE2Q9NQ36 999 aa16.27■□□□□ 0.2
LINC01709-202ENST00000635702 TTLL13PA6NNM8 815 aa16.25■□□□□ 0.19
LINC01709-202ENST00000635702 PCDH10Q9P2E7 1040 aa16.22■□□□□ 0.19
LINC01709-202ENST00000635702 COLQQ9Y215 455 aaPredicted RBP16.22■□□□□ 0.19
LINC01709-202ENST00000635702 NUBP1P53384 320 aa16.2■□□□□ 0.18
LINC01709-202ENST00000635702 SGIP1Q9BQI5 828 aa16.2■□□□□ 0.18
LINC01709-202ENST00000635702 PLCD3Q8N3E9 789 aa16.19■□□□□ 0.18
LINC01709-202ENST00000635702 FAM163AQ96GL9 167 aaPredicted RBP16.16■□□□□ 0.18
LINC01709-202ENST00000635702 PCDHB13Q9Y5F0 798 aa16.14■□□□□ 0.17
LINC01709-202ENST00000635702 TRIM35Q9UPQ4 493 aa16.13■□□□□ 0.17
LINC01709-202ENST00000635702 IER5LQ5T953 404 aa16.12■□□□□ 0.17
LINC01709-202ENST00000635702 ZBTB47Q9UFB7 747 aaPredicted RBP16.1■□□□□ 0.17
LINC01709-202ENST00000635702 SEC24BO95487 1268 aa16.09■□□□□ 0.17
LINC01709-202ENST00000635702 IFNL1Q8IU54 200 aa16.09■□□□□ 0.17
LINC01709-202ENST00000635702 FAM212AQ96EL1 285 aa16.01■□□□□ 0.15
LINC01709-202ENST00000635702 TMEM106CQ9BVX2 250 aa15.98■□□□□ 0.15
LINC01709-202ENST00000635702 FKBP8Q14318 412 aa15.96■□□□□ 0.15
LINC01709-202ENST00000635702 IRX5P78411 483 aaPredicted RBP15.92■□□□□ 0.14
LINC01709-202ENST00000635702 SLAIN1Q8ND83 568 aa15.88■□□□□ 0.13
LINC01709-202ENST00000635702 PLCG2P16885 1265 aa15.86■□□□□ 0.13
LINC01709-202ENST00000635702 ST18O60284 1047 aa15.83■□□□□ 0.12
LINC01709-202ENST00000635702 CDAN1Q8IWY9 1227 aa15.83■□□□□ 0.12
LINC01709-202ENST00000635702 PYGBP11216 843 aa15.82■□□□□ 0.12
LINC01709-202ENST00000635702 DCAF8Q5TAQ9 597 aa15.81■□□□□ 0.12
LINC01709-202ENST00000635702 OCEL1Q9H607 264 aa15.78■□□□□ 0.12
LINC01709-202ENST00000635702 PCDHB8Q9UN66 801 aa15.77■□□□□ 0.12
LINC01709-202ENST00000635702 FBXO3Q9UK99 471 aa15.71■□□□□ 0.11
LINC01709-202ENST00000635702 PDCD7Q8N8D1 485 aaKnown RBP15.64■□□□□ 0.09
LINC01709-202ENST00000635702 TMEM121BQ9BXQ6 578 aaPredicted RBP15.62■□□□□ 0.09
LINC01709-202ENST00000635702 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.62■□□□□ 0.09
LINC01709-202ENST00000635702 VASPP50552 380 aaPredicted RBP15.59■□□□□ 0.09
LINC01709-202ENST00000635702 GSE1Q14687 1217 aa15.59■□□□□ 0.09
LINC01709-202ENST00000635702 ZNF467Q7Z7K2 595 aaPredicted RBP15.59■□□□□ 0.09
LINC01709-202ENST00000635702 SNPHO15079 494 aa15.58■□□□□ 0.08
LINC01709-202ENST00000635702 CHRM1P11229 460 aaPredicted RBP15.57■□□□□ 0.08
LINC01709-202ENST00000635702 KLHL34Q8N239 644 aa15.52■□□□□ 0.08
LINC01709-202ENST00000635702 MARVELD3Q96A59 401 aa15.5■□□□□ 0.07
LINC01709-202ENST00000635702 MKRN3Q13064 507 aaKnown RBP15.49■□□□□ 0.07
LINC01709-202ENST00000635702 ILDR1Q86SU0 546 aaPredicted RBP15.48■□□□□ 0.07
LINC01709-202ENST00000635702 SPNS2Q8IVW8 549 aa15.48■□□□□ 0.07
LINC01709-202ENST00000635702 PSEN1P49768 467 aa15.47■□□□□ 0.07
LINC01709-202ENST00000635702 L3MBTL3Q96JM7 780 aaPredicted RBP15.47■□□□□ 0.07
LINC01709-202ENST00000635702 MMRN1Q13201 1228 aa15.46■□□□□ 0.07
LINC01709-202ENST00000635702 C3orf67Q6ZVT6 689 aa15.45■□□□□ 0.06
LINC01709-202ENST00000635702 GOLGA2Q08379 1002 aa15.44■□□□□ 0.06
LINC01709-202ENST00000635702 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.44■□□□□ 0.06
LINC01709-202ENST00000635702 PDAP1Q13442 181 aaKnown RBP15.37■□□□□ 0.05
LINC01709-202ENST00000635702 POTEB3A0JP26 581 aa15.35■□□□□ 0.05
LINC01709-202ENST00000635702 DPY19L2Q6NUT2 758 aa15.35■□□□□ 0.05
LINC01709-202ENST00000635702 POTEBQ6S5H4 581 aa15.35■□□□□ 0.05
LINC01709-202ENST00000635702 EMP3P54852 163 aa15.34■□□□□ 0.05
LINC01709-202ENST00000635702 IFNLR1Q8IU57 520 aaPredicted RBP15.31■□□□□ 0.04
LINC01709-202ENST00000635702 KRTAP3-3Q9BYR6 98 aa15.3■□□□□ 0.04
LINC01709-202ENST00000635702 KRTAP3-2Q9BYR7 98 aa15.3■□□□□ 0.04
LINC01709-202ENST00000635702 SPOCK2Q92563 424 aa15.28■□□□□ 0.04
LINC01709-202ENST00000635702 HS3ST6Q96QI5 342 aa15.28■□□□□ 0.04
LINC01709-202ENST00000635702 CABP2Q9NPB3 220 aa15.27■□□□□ 0.04
LINC01709-202ENST00000635702 FAM205CA6NFA0 338 aa15.24■□□□□ 0.03
LINC01709-202ENST00000635702 HOXB3P14651 431 aaPredicted RBP15.24■□□□□ 0.03
LINC01709-202ENST00000635702 BOLA1Q9Y3E2 137 aa15.23■□□□□ 0.03
LINC01709-202ENST00000635702 CIZ1Q9ULV3 898 aaPredicted RBP15.22■□□□□ 0.03
LINC01709-202ENST00000635702 G3V3G9 751 aa15.12■□□□□ 0.01
LINC01709-202ENST00000635702 HOXB1P14653 301 aaPredicted RBP15.11■□□□□ 0.01
LINC01709-202ENST00000635702 EFCAB3Q8N7B9 438 aa15.08■□□□□ 0
LINC01709-202ENST00000635702 DOK7Q18PE1 504 aa15.04■□□□□ -0
LINC01709-202ENST00000635702 TRIM41Q8WV44 630 aa15.03■□□□□ -0
LINC01709-202ENST00000635702 ZNF710Q8N1W2 664 aa15.02■□□□□ -0
LINC01709-202ENST00000635702 TMEM92Q6UXU6 159 aa15.01□□□□□ -0.01
LINC01709-202ENST00000635702 MICALL2Q8IY33 904 aa14.98□□□□□ -0.01
LINC01709-202ENST00000635702 ERBB3P21860 1342 aa14.97□□□□□ -0.01
LINC01709-202ENST00000635702 RNF25Q96BH1 459 aaPredicted RBP14.93□□□□□ -0.02
LINC01709-202ENST00000635702 MS4A4AQ96JQ5 239 aa14.93□□□□□ -0.02
LINC01709-202ENST00000635702 RIMBP2O15034 1052 aa14.91□□□□□ -0.02
LINC01709-202ENST00000635702 SOX12O15370 315 aa14.9□□□□□ -0.02
LINC01709-202ENST00000635702 ZSWIM6Q9HCJ5 1215 aa14.9□□□□□ -0.02
LINC01709-202ENST00000635702 VARS2Q5ST30 1063 aaKnown RBP14.89□□□□□ -0.03
LINC01709-202ENST00000635702 GPR153Q6NV75 609 aa14.88□□□□□ -0.03
LINC01709-202ENST00000635702 RIOK3O14730 519 aaKnown RBP14.87□□□□□ -0.03
LINC01709-202ENST00000635702 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.86□□□□□ -0.03
LINC01709-202ENST00000635702 ZFP91Q96JP5 570 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms