RNA–Protein interactions for RNA: ENST00000635688.1

SMARCA2-245, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-245ENST00000635688 PLCD3Q8N3E9 789 aa18.72■□□□□ 0.59
SMARCA2-245ENST00000635688 PLEKHG5O94827 1062 aa18.71■□□□□ 0.59
SMARCA2-245ENST00000635688 PELP1Q8IZL8 1130 aaKnown RBP18.68■□□□□ 0.58
SMARCA2-245ENST00000635688 KIF12Q96FN5 646 aa18.63■□□□□ 0.57
SMARCA2-245ENST00000635688 POTEB2H3BUK9 544 aa18.57■□□□□ 0.56
SMARCA2-245ENST00000635688 ASTLQ6HA08 431 aaPredicted RBP18.57■□□□□ 0.56
SMARCA2-245ENST00000635688 NUBP1P53384 320 aa18.56■□□□□ 0.56
SMARCA2-245ENST00000635688 ATMINO43313 823 aaPredicted RBP18.55■□□□□ 0.56
SMARCA2-245ENST00000635688 MAP3K13O43283 966 aa18.54■□□□□ 0.56
SMARCA2-245ENST00000635688 TRPC6Q9Y210 931 aa18.54■□□□□ 0.56
SMARCA2-245ENST00000635688 ZBTB47Q9UFB7 747 aaPredicted RBP18.48■□□□□ 0.55
SMARCA2-245ENST00000635688 ATN1P54259 1190 aaPredicted RBP18.45■□□□□ 0.54
SMARCA2-245ENST00000635688 OTUD5Q96G74 571 aa18.42■□□□□ 0.54
SMARCA2-245ENST00000635688 BMP2KQ9NSY1 1161 aaPredicted RBP18.42■□□□□ 0.54
SMARCA2-245ENST00000635688 METRNQ9UJH8 293 aa18.42■□□□□ 0.54
SMARCA2-245ENST00000635688 FBXO3Q9UK99 471 aa18.41■□□□□ 0.54
SMARCA2-245ENST00000635688 SLC39A7Q92504 469 aa18.37■□□□□ 0.53
SMARCA2-245ENST00000635688 C7P10643 843 aa18.34■□□□□ 0.53
SMARCA2-245ENST00000635688 POTEJP0CG39 1038 aa18.33■□□□□ 0.52
SMARCA2-245ENST00000635688 FAM212AQ96EL1 285 aa18.33■□□□□ 0.52
SMARCA2-245ENST00000635688 PCDHB13Q9Y5F0 798 aa18.32■□□□□ 0.52
SMARCA2-245ENST00000635688 TIE1P35590 1138 aa18.31■□□□□ 0.52
SMARCA2-245ENST00000635688 VASPP50552 380 aaPredicted RBP18.29■□□□□ 0.52
SMARCA2-245ENST00000635688 POTEFA5A3E0 1075 aa18.27■□□□□ 0.52
SMARCA2-245ENST00000635688 TTLL13PA6NNM8 815 aa18.27■□□□□ 0.52
SMARCA2-245ENST00000635688 IFNL1Q8IU54 200 aa18.27■□□□□ 0.52
SMARCA2-245ENST00000635688 SGIP1Q9BQI5 828 aa18.26■□□□□ 0.51
SMARCA2-245ENST00000635688 DCAF8Q5TAQ9 597 aa18.22■□□□□ 0.51
SMARCA2-245ENST00000635688 PYGBP11216 843 aa18.18■□□□□ 0.5
SMARCA2-245ENST00000635688 KLHL34Q8N239 644 aa18.16■□□□□ 0.5
SMARCA2-245ENST00000635688 TRIM35Q9UPQ4 493 aa18.15■□□□□ 0.5
SMARCA2-245ENST00000635688 COLQQ9Y215 455 aaPredicted RBP18.15■□□□□ 0.5
SMARCA2-245ENST00000635688 TMEM106CQ9BVX2 250 aa18.09■□□□□ 0.49
SMARCA2-245ENST00000635688 PCDHB8Q9UN66 801 aa18.06■□□□□ 0.48
SMARCA2-245ENST00000635688 IFNLR1Q8IU57 520 aaPredicted RBP18.04■□□□□ 0.48
SMARCA2-245ENST00000635688 SEC24BO95487 1268 aa18.01■□□□□ 0.47
SMARCA2-245ENST00000635688 MAMSTRQ6ZN01 415 aa18■□□□□ 0.47
SMARCA2-245ENST00000635688 IER5LQ5T953 404 aa17.99■□□□□ 0.47
SMARCA2-245ENST00000635688 GSE1Q14687 1217 aa17.97■□□□□ 0.47
SMARCA2-245ENST00000635688 SCUBE2Q9NQ36 999 aa17.95■□□□□ 0.46
SMARCA2-245ENST00000635688 IRX5P78411 483 aaPredicted RBP17.88■□□□□ 0.45
SMARCA2-245ENST00000635688 SPOCK2Q92563 424 aa17.88■□□□□ 0.45
SMARCA2-245ENST00000635688 CHRM1P11229 460 aaPredicted RBP17.87■□□□□ 0.45
SMARCA2-245ENST00000635688 LCE2DQ5TA82 110 aaPredicted RBP17.84■□□□□ 0.45
SMARCA2-245ENST00000635688 PLCG2P16885 1265 aa17.82■□□□□ 0.44
SMARCA2-245ENST00000635688 POTEMA6NI47 508 aa17.81■□□□□ 0.44
SMARCA2-245ENST00000635688 ZNF467Q7Z7K2 595 aaPredicted RBP17.81■□□□□ 0.44
SMARCA2-245ENST00000635688 ABCC9O60706 1549 aa17.81■□□□□ 0.44
SMARCA2-245ENST00000635688 POTEGQ6S5H5 508 aa17.79■□□□□ 0.44
SMARCA2-245ENST00000635688 CIZ1Q9ULV3 898 aaPredicted RBP17.79■□□□□ 0.44
SMARCA2-245ENST00000635688 FAM163AQ96GL9 167 aaPredicted RBP17.75■□□□□ 0.43
SMARCA2-245ENST00000635688 OCEL1Q9H607 264 aa17.75■□□□□ 0.43
SMARCA2-245ENST00000635688 PSEN1P49768 467 aa17.72■□□□□ 0.43
SMARCA2-245ENST00000635688 PDCD7Q8N8D1 485 aaKnown RBP17.66■□□□□ 0.42
SMARCA2-245ENST00000635688 SLAIN1Q8ND83 568 aa17.66■□□□□ 0.42
SMARCA2-245ENST00000635688 PDAP1Q13442 181 aaKnown RBP17.62■□□□□ 0.41
SMARCA2-245ENST00000635688 PLSCR2Q9NRY7 297 aa17.61■□□□□ 0.41
SMARCA2-245ENST00000635688 MKRN3Q13064 507 aaKnown RBP17.6■□□□□ 0.41
SMARCA2-245ENST00000635688 GOLGA2Q08379 1002 aa17.58■□□□□ 0.4
SMARCA2-245ENST00000635688 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.54■□□□□ 0.42e-8■■■■□ 21
SMARCA2-245ENST00000635688 CABP2Q9NPB3 220 aa17.52■□□□□ 0.4
SMARCA2-245ENST00000635688 ILDR1Q86SU0 546 aaPredicted RBP17.5■□□□□ 0.39
SMARCA2-245ENST00000635688 DPY19L2Q6NUT2 758 aa17.49■□□□□ 0.39
SMARCA2-245ENST00000635688 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.48■□□□□ 0.39
SMARCA2-245ENST00000635688 ST18O60284 1047 aa17.47■□□□□ 0.39
SMARCA2-245ENST00000635688 TRIM41Q8WV44 630 aa17.44■□□□□ 0.38
SMARCA2-245ENST00000635688 RNF25Q96BH1 459 aaPredicted RBP17.44■□□□□ 0.38
SMARCA2-245ENST00000635688 L3MBTL3Q96JM7 780 aaPredicted RBP17.41■□□□□ 0.38
SMARCA2-245ENST00000635688 PCDH10Q9P2E7 1040 aa17.39■□□□□ 0.37
SMARCA2-245ENST00000635688 C3orf67Q6ZVT6 689 aa17.36■□□□□ 0.37
SMARCA2-245ENST00000635688 EFCAB3Q8N7B9 438 aa17.35■□□□□ 0.37
SMARCA2-245ENST00000635688 CCDC180Q9P1Z9 1646 aa17.33■□□□□ 0.37
SMARCA2-245ENST00000635688 RIOK3O14730 519 aaKnown RBP17.31■□□□□ 0.36
SMARCA2-245ENST00000635688 BOLA1Q9Y3E2 137 aa17.28■□□□□ 0.36
SMARCA2-245ENST00000635688 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.27■□□□□ 0.36
SMARCA2-245ENST00000635688 CDAN1Q8IWY9 1227 aa17.27■□□□□ 0.36
SMARCA2-245ENST00000635688 ZFP91Q96JP5 570 aaPredicted RBP17.27■□□□□ 0.36
SMARCA2-245ENST00000635688 SNPHO15079 494 aa17.24■□□□□ 0.35
SMARCA2-245ENST00000635688 MARVELD3Q96A59 401 aa17.22■□□□□ 0.35
SMARCA2-245ENST00000635688 VGFO15240 615 aaPredicted RBP17.2■□□□□ 0.34
SMARCA2-245ENST00000635688 TMEM121BQ9BXQ6 578 aaPredicted RBP17.19■□□□□ 0.34
SMARCA2-245ENST00000635688 MS4A4AQ96JQ5 239 aa17.16■□□□□ 0.34
SMARCA2-245ENST00000635688 G3V3G9 751 aa17.14■□□□□ 0.33
SMARCA2-245ENST00000635688 PHF8Q9UPP1 1060 aa17.13■□□□□ 0.33
SMARCA2-245ENST00000635688 SOX12O15370 315 aa17.1■□□□□ 0.33
SMARCA2-245ENST00000635688 HOXB3P14651 431 aaPredicted RBP17.09■□□□□ 0.33
SMARCA2-245ENST00000635688 MICALL2Q8IY33 904 aa17.07■□□□□ 0.32
SMARCA2-245ENST00000635688 PKD2Q13563 968 aa17.06■□□□□ 0.32
SMARCA2-245ENST00000635688 TMEM92Q6UXU6 159 aa17.06■□□□□ 0.32
SMARCA2-245ENST00000635688 BCL11BQ9C0K0 894 aaPredicted RBP17.06■□□□□ 0.32
SMARCA2-245ENST00000635688 ECM2O94769 699 aaPredicted RBP17.05■□□□□ 0.32
SMARCA2-245ENST00000635688 POTEB3A0JP26 581 aa17.04■□□□□ 0.32
SMARCA2-245ENST00000635688 POTEBQ6S5H4 581 aa17.04■□□□□ 0.32
SMARCA2-245ENST00000635688 EMP3P54852 163 aa17.02■□□□□ 0.32
SMARCA2-245ENST00000635688 RGL2O15211 777 aa17■□□□□ 0.31
SMARCA2-245ENST00000635688 STK24Q9Y6E0 443 aa17■□□□□ 0.31
SMARCA2-245ENST00000635688 FBXO22Q8NEZ5 403 aa16.98■□□□□ 0.31
SMARCA2-245ENST00000635688 FAM205CA6NFA0 338 aa16.95■□□□□ 0.3
SMARCA2-245ENST00000635688 STK25O00506 426 aa16.94■□□□□ 0.3
SMARCA2-245ENST00000635688 HS3ST6Q96QI5 342 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms