RNA–Protein interactions for RNA: ENST00000635397.1

SMARCA2-241, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 4

Gene SMARCA2, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-241ENST00000635397 FAM212AQ96EL1 285 aa12.74□□□□□ -0.37
SMARCA2-241ENST00000635397 VSIG10Q8N0Z9 540 aa12.7□□□□□ -0.38
SMARCA2-241ENST00000635397 SPRYD3Q8NCJ5 442 aa12.69□□□□□ -0.38
SMARCA2-241ENST00000635397 RNF25Q96BH1 459 aaPredicted RBP12.69□□□□□ -0.38
SMARCA2-241ENST00000635397 RASEFQ8IZ41 740 aa12.67□□□□□ -0.38
SMARCA2-241ENST00000635397 HS6ST3Q8IZP7 471 aa12.65□□□□□ -0.38
SMARCA2-241ENST00000635397 TAOK2Q9UL54 1235 aa12.65□□□□□ -0.38
SMARCA2-241ENST00000635397 RIOK3O14730 519 aaKnown RBP12.64□□□□□ -0.39
SMARCA2-241ENST00000635397 CHRM1P11229 460 aaPredicted RBP12.59□□□□□ -0.39
SMARCA2-241ENST00000635397 CHADLQ6NUI6 762 aa12.59□□□□□ -0.39
SMARCA2-241ENST00000635397 VGFO15240 615 aaPredicted RBP12.56□□□□□ -0.4
SMARCA2-241ENST00000635397 PYGBP11216 843 aa12.55□□□□□ -0.4
SMARCA2-241ENST00000635397 TSHZ2Q9NRE2 1034 aa12.55□□□□□ -0.4
SMARCA2-241ENST00000635397 KDM2AQ9Y2K7 1162 aa12.55□□□□□ -0.4
SMARCA2-241ENST00000635397 DNAJC5Q9H3Z4 198 aa12.54□□□□□ -0.4
SMARCA2-241ENST00000635397 STK25O00506 426 aa12.52□□□□□ -0.41
SMARCA2-241ENST00000635397 FARP1Q9Y4F1 1045 aaPredicted RBP12.51□□□□□ -0.41
SMARCA2-241ENST00000635397 BCANQ96GW7 911 aa12.5□□□□□ -0.41
SMARCA2-241ENST00000635397 TSPYL2Q9H2G4 693 aaPredicted RBP12.5□□□□□ -0.41
SMARCA2-241ENST00000635397 PRKAR2AP13861 404 aaKnown RBP12.47□□□□□ -0.41
SMARCA2-241ENST00000635397 SGIP1Q9BQI5 828 aa12.47□□□□□ -0.41
SMARCA2-241ENST00000635397 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.46□□□□□ -0.41
SMARCA2-241ENST00000635397 NKX1-1Q15270 411 aaPredicted RBP12.46□□□□□ -0.41
SMARCA2-241ENST00000635397 ZFP91Q96JP5 570 aaPredicted RBP12.46□□□□□ -0.41
SMARCA2-241ENST00000635397 STK24Q9Y6E0 443 aa12.45□□□□□ -0.42
SMARCA2-241ENST00000635397 BCL11BQ9C0K0 894 aaPredicted RBP12.44□□□□□ -0.42
SMARCA2-241ENST00000635397 FXR2P51116 673 aaKnown RBP eCLIP12.42□□□□□ -0.42
SMARCA2-241ENST00000635397 GTPBP6O43824 516 aaPredicted RBP12.4□□□□□ -0.42
SMARCA2-241ENST00000635397 ZNF467Q7Z7K2 595 aaPredicted RBP12.39□□□□□ -0.43
SMARCA2-241ENST00000635397 CHRDL2Q6WN34 429 aa12.35□□□□□ -0.43
SMARCA2-241ENST00000635397 PAK3O75914 559 aaPredicted RBP12.33□□□□□ -0.44
SMARCA2-241ENST00000635397 RYDENQ9NUL5 291 aaKnown RBP12.33□□□□□ -0.44
SMARCA2-241ENST00000635397 CCDC61Q9Y6R9 512 aa12.33□□□□□ -0.44
SMARCA2-241ENST00000635397 PIP4P2Q8N4L2 257 aa12.31□□□□□ -0.44
SMARCA2-241ENST00000635397 PCDHB8Q9UN66 801 aa12.31□□□□□ -0.44
SMARCA2-241ENST00000635397 PCDHB13Q9Y5F0 798 aa12.31□□□□□ -0.44
SMARCA2-241ENST00000635397 PDAP1Q13442 181 aaKnown RBP12.3□□□□□ -0.44
SMARCA2-241ENST00000635397 ZNF579Q8NAF0 562 aaKnown RBP12.27□□□□□ -0.45
SMARCA2-241ENST00000635397 PSEN1P49768 467 aa12.25□□□□□ -0.45
SMARCA2-241ENST00000635397 MAP3K13O43283 966 aa12.2□□□□□ -0.46
SMARCA2-241ENST00000635397 IFNL1Q8IU54 200 aa12.19□□□□□ -0.46
SMARCA2-241ENST00000635397 KIF12Q96FN5 646 aa12.19□□□□□ -0.46
SMARCA2-241ENST00000635397 PRKCSHP14314 528 aaPredicted RBP12.18□□□□□ -0.46
SMARCA2-241ENST00000635397 NBR1Q14596 966 aa12.17□□□□□ -0.46
SMARCA2-241ENST00000635397 ZRANB1Q9UGI0 708 aa12.17□□□□□ -0.46
SMARCA2-241ENST00000635397 CD44P16070 742 aaKnown RBP12.14□□□□□ -0.47
SMARCA2-241ENST00000635397 TPRNQ4KMQ1 711 aa12.11□□□□□ -0.47
SMARCA2-241ENST00000635397 MFRPQ9BY79 579 aa12.11□□□□□ -0.47
SMARCA2-241ENST00000635397 CABP2Q9NPB3 220 aa12.1□□□□□ -0.47
SMARCA2-241ENST00000635397 PHF12Q96QT6 1004 aa12.09□□□□□ -0.47
SMARCA2-241ENST00000635397 EFCAB3Q8N7B9 438 aa12.08□□□□□ -0.48
SMARCA2-241ENST00000635397 SOX12O15370 315 aa12.05□□□□□ -0.48
SMARCA2-241ENST00000635397 NLRP6P59044 892 aa12.05□□□□□ -0.48
SMARCA2-241ENST00000635397 CADPS2Q86UW7 1296 aa12.04□□□□□ -0.48
SMARCA2-241ENST00000635397 WDR70Q9NW82 654 aa12.03□□□□□ -0.48
SMARCA2-241ENST00000635397 PHF8Q9UPP1 1060 aa12.02□□□□□ -0.49
SMARCA2-241ENST00000635397 FBXO22Q8NEZ5 403 aa12.01□□□□□ -0.49
SMARCA2-241ENST00000635397 PPP1R37O75864 691 aa11.99□□□□□ -0.49
SMARCA2-241ENST00000635397 P3H3Q8IVL6 736 aa11.99□□□□□ -0.49
SMARCA2-241ENST00000635397 C19orf67A6NJJ6 358 aa11.98□□□□□ -0.49
SMARCA2-241ENST00000635397 GOLGA2Q08379 1002 aa11.97□□□□□ -0.49
SMARCA2-241ENST00000635397 TMEM106CQ9BVX2 250 aa11.97□□□□□ -0.49
SMARCA2-241ENST00000635397 MS4A3Q96HJ5 214 aa11.96□□□□□ -0.49
SMARCA2-241ENST00000635397 TRPC6Q9Y210 931 aa11.93□□□□□ -0.5
SMARCA2-241ENST00000635397 KCNV2Q8TDN2 545 aa11.9□□□□□ -0.5
SMARCA2-241ENST00000635397 MKRN3Q13064 507 aaKnown RBP11.89□□□□□ -0.51
SMARCA2-241ENST00000635397 MS4A4AQ96JQ5 239 aa11.88□□□□□ -0.51
SMARCA2-241ENST00000635397 TIE1P35590 1138 aa11.86□□□□□ -0.51
SMARCA2-241ENST00000635397 TTLL13PA6NNM8 815 aa11.82□□□□□ -0.52
SMARCA2-241ENST00000635397 E2F4Q16254 413 aa11.81□□□□□ -0.52
SMARCA2-241ENST00000635397 HAX1O00165 279 aa11.8□□□□□ -0.52
SMARCA2-241ENST00000635397 PDE4AP27815 886 aa11.8□□□□□ -0.52
SMARCA2-241ENST00000635397 BMP2KQ9NSY1 1161 aaPredicted RBP11.8□□□□□ -0.52
SMARCA2-241ENST00000635397 GALR2O43603 387 aaPredicted RBP11.79□□□□□ -0.52
SMARCA2-241ENST00000635397 LARP6Q9BRS8 491 aaKnown RBP11.79□□□□□ -0.52
SMARCA2-241ENST00000635397 NCKAP5LQ9HCH0 1330 aa11.79□□□□□ -0.52
SMARCA2-241ENST00000635397 ARHGEF1Q92888 912 aaKnown RBP11.78□□□□□ -0.52
SMARCA2-241ENST00000635397 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.77□□□□□ -0.532e-8■■■■□ 21
SMARCA2-241ENST00000635397 TRIM35Q9UPQ4 493 aa11.75□□□□□ -0.53
SMARCA2-241ENST00000635397 CRISPLD2Q9H0B8 497 aa11.74□□□□□ -0.53
SMARCA2-241ENST00000635397 CLCN6P51797 869 aa11.73□□□□□ -0.53
SMARCA2-241ENST00000635397 MFSD10Q14728 455 aa11.73□□□□□ -0.53
SMARCA2-241ENST00000635397 ILDR1Q86SU0 546 aaPredicted RBP11.72□□□□□ -0.53
SMARCA2-241ENST00000635397 DDX27Q96GQ7 796 aaKnown RBP11.72□□□□□ -0.53
SMARCA2-241ENST00000635397 TULP1O00294 542 aaPredicted RBP11.71□□□□□ -0.53
SMARCA2-241ENST00000635397 EVX2Q03828 476 aa11.71□□□□□ -0.53
SMARCA2-241ENST00000635397 LMOD2Q6P5Q4 547 aa11.7□□□□□ -0.54
SMARCA2-241ENST00000635397 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.7□□□□□ -0.54
SMARCA2-241ENST00000635397 ATN1P54259 1190 aaPredicted RBP11.66□□□□□ -0.54
SMARCA2-241ENST00000635397 DPY19L2Q6NUT2 758 aa11.66□□□□□ -0.54
SMARCA2-241ENST00000635397 SEMA3EO15041 775 aa11.64□□□□□ -0.55
SMARCA2-241ENST00000635397 TESPA1A2RU30 521 aaPredicted RBP11.62□□□□□ -0.55
SMARCA2-241ENST00000635397 ATMINO43313 823 aaPredicted RBP11.62□□□□□ -0.55
SMARCA2-241ENST00000635397 CAMK2BQ13554 666 aa11.62□□□□□ -0.55
SMARCA2-241ENST00000635397 GPHNQ9NQX3 736 aaPredicted RBP11.62□□□□□ -0.55
SMARCA2-241ENST00000635397 PPP1R15BQ5SWA1 713 aa11.61□□□□□ -0.55
SMARCA2-241ENST00000635397 MICALL2Q8IY33 904 aa11.61□□□□□ -0.55
SMARCA2-241ENST00000635397 ARIH1Q9Y4X5 557 aaPredicted RBP11.61□□□□□ -0.55
SMARCA2-241ENST00000635397 PDCD7Q8N8D1 485 aaKnown RBP11.6□□□□□ -0.55
SMARCA2-241ENST00000635397 ASTLQ6HA08 431 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms