RNA–Protein interactions for RNA: ENST00000635388.1

SMARCA2-239, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-239ENST00000635388 FARP1Q9Y4F1 1045 aaPredicted RBP16.31■□□□□ 0.2
SMARCA2-239ENST00000635388 PRKAR2AP13861 404 aaKnown RBP16.3■□□□□ 0.2
SMARCA2-239ENST00000635388 CHRDL2Q6WN34 429 aa16.29■□□□□ 0.2
SMARCA2-239ENST00000635388 BBXQ8WY36 941 aaPredicted RBP16.29■□□□□ 0.2
SMARCA2-239ENST00000635388 CHRM1P11229 460 aaPredicted RBP16.26■□□□□ 0.19
SMARCA2-239ENST00000635388 PIP4P2Q8N4L2 257 aa16.22■□□□□ 0.19
SMARCA2-239ENST00000635388 CHGAP10645 457 aaKnown RBP16.21■□□□□ 0.19
SMARCA2-239ENST00000635388 RIOK3O14730 519 aaKnown RBP16.2■□□□□ 0.18
SMARCA2-239ENST00000635388 HS6ST3Q8IZP7 471 aa16.19■□□□□ 0.18
SMARCA2-239ENST00000635388 PYGBP11216 843 aa16.17■□□□□ 0.18
SMARCA2-239ENST00000635388 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.16■□□□□ 0.18
SMARCA2-239ENST00000635388 TSPYL2Q9H2G4 693 aaPredicted RBP16.14■□□□□ 0.17
SMARCA2-239ENST00000635388 DNAJC5Q9H3Z4 198 aa16.12■□□□□ 0.17
SMARCA2-239ENST00000635388 HAP1P54257 671 aaPredicted RBP16.1■□□□□ 0.17
SMARCA2-239ENST00000635388 VGFO15240 615 aaPredicted RBP16.09■□□□□ 0.17
SMARCA2-239ENST00000635388 PAXIP1Q6ZW49 1069 aaPredicted RBP16.09■□□□□ 0.17
SMARCA2-239ENST00000635388 CCDC61Q9Y6R9 512 aa16.09■□□□□ 0.17
SMARCA2-239ENST00000635388 SGIP1Q9BQI5 828 aa16.07■□□□□ 0.16
SMARCA2-239ENST00000635388 TAOK2Q9UL54 1235 aa16.07■□□□□ 0.16
SMARCA2-239ENST00000635388 CFAP44Q96MT7 982 aa16.03■□□□□ 0.16
SMARCA2-239ENST00000635388 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.01■□□□□ 0.15
SMARCA2-239ENST00000635388 NKX1-1Q15270 411 aaPredicted RBP16.01■□□□□ 0.15
SMARCA2-239ENST00000635388 SPRYD3Q8NCJ5 442 aa16.01■□□□□ 0.15
SMARCA2-239ENST00000635388 ZFP91Q96JP5 570 aaPredicted RBP16.01■□□□□ 0.15
SMARCA2-239ENST00000635388 STK25O00506 426 aa15.99■□□□□ 0.15
SMARCA2-239ENST00000635388 ZNF467Q7Z7K2 595 aaPredicted RBP15.95■□□□□ 0.14
SMARCA2-239ENST00000635388 BCL11BQ9C0K0 894 aaPredicted RBP15.94■□□□□ 0.14
SMARCA2-239ENST00000635388 PAK3O75914 559 aaPredicted RBP15.92■□□□□ 0.14
SMARCA2-239ENST00000635388 VSIG10Q8N0Z9 540 aa15.9■□□□□ 0.14
SMARCA2-239ENST00000635388 PCDHB8Q9UN66 801 aa15.9■□□□□ 0.14
SMARCA2-239ENST00000635388 PCDHB13Q9Y5F0 798 aa15.9■□□□□ 0.14
SMARCA2-239ENST00000635388 STK24Q9Y6E0 443 aa15.9■□□□□ 0.14
SMARCA2-239ENST00000635388 ZNF579Q8NAF0 562 aaKnown RBP15.89■□□□□ 0.13
SMARCA2-239ENST00000635388 KIF12Q96FN5 646 aa15.87■□□□□ 0.13
SMARCA2-239ENST00000635388 GTPBP6O43824 516 aaPredicted RBP15.86■□□□□ 0.13
SMARCA2-239ENST00000635388 CD44P16070 742 aaKnown RBP15.86■□□□□ 0.13
SMARCA2-239ENST00000635388 PDAP1Q13442 181 aaKnown RBP15.85■□□□□ 0.13
SMARCA2-239ENST00000635388 TSHZ2Q9NRE2 1034 aa15.85■□□□□ 0.13
SMARCA2-239ENST00000635388 KDM2AQ9Y2K7 1162 aa15.85■□□□□ 0.13
SMARCA2-239ENST00000635388 MAP3K13O43283 966 aa15.84■□□□□ 0.13
SMARCA2-239ENST00000635388 IFNL1Q8IU54 200 aa15.83■□□□□ 0.12
SMARCA2-239ENST00000635388 ZRANB1Q9UGI0 708 aa15.83■□□□□ 0.12
SMARCA2-239ENST00000635388 C19orf67A6NJJ6 358 aa15.79■□□□□ 0.12
SMARCA2-239ENST00000635388 PSEN1P49768 467 aa15.78■□□□□ 0.12
SMARCA2-239ENST00000635388 PHF12Q96QT6 1004 aa15.78■□□□□ 0.12
SMARCA2-239ENST00000635388 RYDENQ9NUL5 291 aaKnown RBP15.66■□□□□ 0.1
SMARCA2-239ENST00000635388 MFRPQ9BY79 579 aa15.63■□□□□ 0.09
SMARCA2-239ENST00000635388 MS4A3Q96HJ5 214 aa15.62■□□□□ 0.09
SMARCA2-239ENST00000635388 TRPC6Q9Y210 931 aa15.6■□□□□ 0.09
SMARCA2-239ENST00000635388 EFCAB3Q8N7B9 438 aa15.58■□□□□ 0.08
SMARCA2-239ENST00000635388 CABP2Q9NPB3 220 aa15.58■□□□□ 0.08
SMARCA2-239ENST00000635388 FBXO22Q8NEZ5 403 aa15.54■□□□□ 0.08
SMARCA2-239ENST00000635388 EVX2Q03828 476 aa15.52■□□□□ 0.08
SMARCA2-239ENST00000635388 SOX12O15370 315 aa15.5■□□□□ 0.07
SMARCA2-239ENST00000635388 BCANQ96GW7 911 aa15.5■□□□□ 0.07
SMARCA2-239ENST00000635388 TMEM106CQ9BVX2 250 aa15.49■□□□□ 0.07
SMARCA2-239ENST00000635388 PHF8Q9UPP1 1060 aa15.49■□□□□ 0.07
SMARCA2-239ENST00000635388 HAX1O00165 279 aa15.47■□□□□ 0.07
SMARCA2-239ENST00000635388 GALR2O43603 387 aaPredicted RBP15.45■□□□□ 0.06
SMARCA2-239ENST00000635388 TIE1P35590 1138 aa15.45■□□□□ 0.06
SMARCA2-239ENST00000635388 NLRP6P59044 892 aa15.45■□□□□ 0.06
SMARCA2-239ENST00000635388 CADPS2Q86UW7 1296 aa15.45■□□□□ 0.06
SMARCA2-239ENST00000635388 PPP1R37O75864 691 aa15.44■□□□□ 0.06
SMARCA2-239ENST00000635388 TTLL13PA6NNM8 815 aa15.41■□□□□ 0.06
SMARCA2-239ENST00000635388 MS4A4AQ96JQ5 239 aa15.41■□□□□ 0.06
SMARCA2-239ENST00000635388 BMP2KQ9NSY1 1161 aaPredicted RBP15.41■□□□□ 0.06
SMARCA2-239ENST00000635388 CLCN6P51797 869 aa15.35■□□□□ 0.05
SMARCA2-239ENST00000635388 GOLGA2Q08379 1002 aa15.33■□□□□ 0.04
SMARCA2-239ENST00000635388 ILDR1Q86SU0 546 aaPredicted RBP15.33■□□□□ 0.04
SMARCA2-239ENST00000635388 MKRN3Q13064 507 aaKnown RBP15.3■□□□□ 0.04
SMARCA2-239ENST00000635388 TRIM35Q9UPQ4 493 aa15.29■□□□□ 0.04
SMARCA2-239ENST00000635388 POTEHQ6S545 545 aa15.24■□□□□ 0.03
SMARCA2-239ENST00000635388 ATN1P54259 1190 aaPredicted RBP15.23■□□□□ 0.03
SMARCA2-239ENST00000635388 ATMINO43313 823 aaPredicted RBP15.22■□□□□ 0.03
SMARCA2-239ENST00000635388 ASTLQ6HA08 431 aaPredicted RBP15.22■□□□□ 0.03
SMARCA2-239ENST00000635388 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.2■□□□□ 0.022e-8■■■■□ 21
SMARCA2-239ENST00000635388 NCKAP5LQ9HCH0 1330 aa15.19■□□□□ 0.02
SMARCA2-239ENST00000635388 GABBR2O75899 941 aa15.19■□□□□ 0.02
SMARCA2-239ENST00000635388 NBR1Q14596 966 aa15.17■□□□□ 0.02
SMARCA2-239ENST00000635388 KCNV2Q8TDN2 545 aa15.17■□□□□ 0.02
SMARCA2-239ENST00000635388 PDCD7Q8N8D1 485 aaKnown RBP15.16■□□□□ 0.02
SMARCA2-239ENST00000635388 P3H3Q8IVL6 736 aa15.15■□□□□ 0.02
SMARCA2-239ENST00000635388 WDR70Q9NW82 654 aa15.15■□□□□ 0.02
SMARCA2-239ENST00000635388 CRISPLD2Q9H0B8 497 aa15.14■□□□□ 0.01
SMARCA2-239ENST00000635388 IRX5P78411 483 aaPredicted RBP15.13■□□□□ 0.01
SMARCA2-239ENST00000635388 DPY19L2Q6NUT2 758 aa15.11■□□□□ 0.01
SMARCA2-239ENST00000635388 MFSD10Q14728 455 aa15.1■□□□□ 0.01
SMARCA2-239ENST00000635388 IER5LQ5T953 404 aa15.1■□□□□ 0.01
SMARCA2-239ENST00000635388 PRKCSHP14314 528 aaPredicted RBP15.08■□□□□ 0
SMARCA2-239ENST00000635388 PDE4AP27815 886 aa15.05■□□□□ -0
SMARCA2-239ENST00000635388 PELP1Q8IZL8 1130 aaKnown RBP15.05■□□□□ -0
SMARCA2-239ENST00000635388 LARP6Q9BRS8 491 aaKnown RBP15.05■□□□□ -0
SMARCA2-239ENST00000635388 MICALL2Q8IY33 904 aa15.04■□□□□ -0
SMARCA2-239ENST00000635388 OCEL1Q9H607 264 aa15.04■□□□□ -0
SMARCA2-239ENST00000635388 E2F4Q16254 413 aa15.02■□□□□ -0
SMARCA2-239ENST00000635388 TPRNQ4KMQ1 711 aa15□□□□□ -0.01
SMARCA2-239ENST00000635388 DDX27Q96GQ7 796 aaKnown RBP14.99□□□□□ -0.01
SMARCA2-239ENST00000635388 TMEM121BQ9BXQ6 578 aaPredicted RBP14.99□□□□□ -0.01
SMARCA2-239ENST00000635388 ARHGEF1Q92888 912 aaKnown RBP14.97□□□□□ -0.01
SMARCA2-239ENST00000635388 DCBLD2Q96PD2 775 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms