RNA–Protein interactions for RNA: ENST00000634781.1

SMARCA2-229, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCA2, Length 1,106 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-229ENST00000634781 MS4A3Q96HJ5 214 aa11.84□□□□□ -0.51
SMARCA2-229ENST00000634781 METRNQ9UJH8 293 aa11.84□□□□□ -0.51
SMARCA2-229ENST00000634781 SLC39A7Q92504 469 aa11.82□□□□□ -0.52
SMARCA2-229ENST00000634781 ATMINO43313 823 aaPredicted RBP11.81□□□□□ -0.52
SMARCA2-229ENST00000634781 C7P10643 843 aa11.8□□□□□ -0.52
SMARCA2-229ENST00000634781 POTEJP0CG39 1038 aa11.76□□□□□ -0.53
SMARCA2-229ENST00000634781 MAMSTRQ6ZN01 415 aa11.76□□□□□ -0.53
SMARCA2-229ENST00000634781 PCDH10Q9P2E7 1040 aa11.76□□□□□ -0.53
SMARCA2-229ENST00000634781 PROM2Q8N271 834 aa11.73□□□□□ -0.53
SMARCA2-229ENST00000634781 TSPYL2Q9H2G4 693 aaPredicted RBP11.72□□□□□ -0.53
SMARCA2-229ENST00000634781 FBXO3Q9UK99 471 aa11.72□□□□□ -0.53
SMARCA2-229ENST00000634781 ATN1P54259 1190 aaPredicted RBP11.69□□□□□ -0.54
SMARCA2-229ENST00000634781 SCUBE2Q9NQ36 999 aa11.67□□□□□ -0.54
SMARCA2-229ENST00000634781 CCDC61Q9Y6R9 512 aa11.67□□□□□ -0.54
SMARCA2-229ENST00000634781 LCE2DQ5TA82 110 aaPredicted RBP11.65□□□□□ -0.54
SMARCA2-229ENST00000634781 FAM163AQ96GL9 167 aaPredicted RBP11.65□□□□□ -0.54
SMARCA2-229ENST00000634781 KIF12Q96FN5 646 aa11.63□□□□□ -0.55
SMARCA2-229ENST00000634781 BMP2KQ9NSY1 1161 aaPredicted RBP11.59□□□□□ -0.55
SMARCA2-229ENST00000634781 POTEFA5A3E0 1075 aa11.58□□□□□ -0.56
SMARCA2-229ENST00000634781 TRPC6Q9Y210 931 aa11.57□□□□□ -0.56
SMARCA2-229ENST00000634781 TIE1P35590 1138 aa11.55□□□□□ -0.56
SMARCA2-229ENST00000634781 MAP3K13O43283 966 aa11.54□□□□□ -0.56
SMARCA2-229ENST00000634781 PLEKHG5O94827 1062 aa11.51□□□□□ -0.57
SMARCA2-229ENST00000634781 SEC24BO95487 1268 aa11.48□□□□□ -0.57
SMARCA2-229ENST00000634781 TTLL13PA6NNM8 815 aa11.47□□□□□ -0.57
SMARCA2-229ENST00000634781 VASPP50552 380 aaPredicted RBP11.47□□□□□ -0.57
SMARCA2-229ENST00000634781 RASEFQ8IZ41 740 aa11.47□□□□□ -0.57
SMARCA2-229ENST00000634781 COLQQ9Y215 455 aaPredicted RBP11.47□□□□□ -0.57
SMARCA2-229ENST00000634781 MIER1Q8N108 512 aa11.46□□□□□ -0.57
SMARCA2-229ENST00000634781 CDAN1Q8IWY9 1227 aa11.41□□□□□ -0.58
SMARCA2-229ENST00000634781 IER5LQ5T953 404 aa11.4□□□□□ -0.58
SMARCA2-229ENST00000634781 TRIM35Q9UPQ4 493 aa11.4□□□□□ -0.58
SMARCA2-229ENST00000634781 SGIP1Q9BQI5 828 aa11.38□□□□□ -0.59
SMARCA2-229ENST00000634781 PCDHB13Q9Y5F0 798 aa11.37□□□□□ -0.59
SMARCA2-229ENST00000634781 PLCD3Q8N3E9 789 aa11.36□□□□□ -0.59
SMARCA2-229ENST00000634781 AMER1Q5JTC6 1135 aaPredicted RBP11.34□□□□□ -0.59
SMARCA2-229ENST00000634781 SLAIN1Q8ND83 568 aa11.34□□□□□ -0.59
SMARCA2-229ENST00000634781 ST18O60284 1047 aa11.31□□□□□ -0.6
SMARCA2-229ENST00000634781 IFNLR1Q8IU57 520 aaPredicted RBP11.29□□□□□ -0.6
SMARCA2-229ENST00000634781 KLHL34Q8N239 644 aa11.29□□□□□ -0.6
SMARCA2-229ENST00000634781 IFNL1Q8IU54 200 aa11.28□□□□□ -0.6
SMARCA2-229ENST00000634781 PLCG2P16885 1265 aa11.27□□□□□ -0.61
SMARCA2-229ENST00000634781 NUBP1P53384 320 aa11.27□□□□□ -0.61
SMARCA2-229ENST00000634781 TMEM106CQ9BVX2 250 aa11.27□□□□□ -0.61
SMARCA2-229ENST00000634781 ZBTB47Q9UFB7 747 aaPredicted RBP11.27□□□□□ -0.61
SMARCA2-229ENST00000634781 FAM212AQ96EL1 285 aa11.22□□□□□ -0.61
SMARCA2-229ENST00000634781 RTN4Q9NQC3 1192 aaKnown RBP11.22□□□□□ -0.61
SMARCA2-229ENST00000634781 IRX5P78411 483 aaPredicted RBP11.2□□□□□ -0.62
SMARCA2-229ENST00000634781 SPOCK2Q92563 424 aa11.2□□□□□ -0.62
SMARCA2-229ENST00000634781 MMRN1Q13201 1228 aa11.15□□□□□ -0.62
SMARCA2-229ENST00000634781 TMEM121BQ9BXQ6 578 aaPredicted RBP11.15□□□□□ -0.62
SMARCA2-229ENST00000634781 OCEL1Q9H607 264 aa11.15□□□□□ -0.62
SMARCA2-229ENST00000634781 SNPHO15079 494 aa11.13□□□□□ -0.63
SMARCA2-229ENST00000634781 SPNS2Q8IVW8 549 aa11.13□□□□□ -0.63
SMARCA2-229ENST00000634781 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.12□□□□□ -0.63
SMARCA2-229ENST00000634781 DCAF8Q5TAQ9 597 aa11.08□□□□□ -0.64
SMARCA2-229ENST00000634781 PYGBP11216 843 aa11.07□□□□□ -0.64
SMARCA2-229ENST00000634781 MARVELD3Q96A59 401 aa11.07□□□□□ -0.64
SMARCA2-229ENST00000634781 PCDHB8Q9UN66 801 aa11.04□□□□□ -0.64
SMARCA2-229ENST00000634781 CIZ1Q9ULV3 898 aaPredicted RBP11□□□□□ -0.65
SMARCA2-229ENST00000634781 GSE1Q14687 1217 aa10.99□□□□□ -0.65
SMARCA2-229ENST00000634781 C3orf67Q6ZVT6 689 aa10.98□□□□□ -0.65
SMARCA2-229ENST00000634781 EMP3P54852 163 aa10.97□□□□□ -0.65
SMARCA2-229ENST00000634781 PKD2Q13563 968 aa10.97□□□□□ -0.65
SMARCA2-229ENST00000634781 PDCD7Q8N8D1 485 aaKnown RBP10.97□□□□□ -0.65
SMARCA2-229ENST00000634781 L3MBTL3Q96JM7 780 aaPredicted RBP10.95□□□□□ -0.66
SMARCA2-229ENST00000634781 TRIM41Q8WV44 630 aa10.94□□□□□ -0.66
SMARCA2-229ENST00000634781 ECM2O94769 699 aaPredicted RBP10.93□□□□□ -0.66
SMARCA2-229ENST00000634781 GOLGA2Q08379 1002 aa10.93□□□□□ -0.66
SMARCA2-229ENST00000634781 MKRN3Q13064 507 aaKnown RBP10.93□□□□□ -0.66
SMARCA2-229ENST00000634781 ZNF467Q7Z7K2 595 aaPredicted RBP10.91□□□□□ -0.66
SMARCA2-229ENST00000634781 HS3ST6Q96QI5 342 aa10.91□□□□□ -0.66
SMARCA2-229ENST00000634781 FAM205CA6NFA0 338 aa10.89□□□□□ -0.67
SMARCA2-229ENST00000634781 KRTAP3-3Q9BYR6 98 aa10.89□□□□□ -0.67
SMARCA2-229ENST00000634781 KRTAP3-2Q9BYR7 98 aa10.89□□□□□ -0.67
SMARCA2-229ENST00000634781 POTEB3A0JP26 581 aa10.88□□□□□ -0.67
SMARCA2-229ENST00000634781 POTEBQ6S5H4 581 aa10.88□□□□□ -0.67
SMARCA2-229ENST00000634781 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.88□□□□□ -0.672e-8■■■■□ 21
SMARCA2-229ENST00000634781 DCAF8L2P0C7V8 631 aa10.83□□□□□ -0.68
SMARCA2-229ENST00000634781 PSEN1P49768 467 aa10.82□□□□□ -0.68
SMARCA2-229ENST00000634781 CHRM1P11229 460 aaPredicted RBP10.81□□□□□ -0.68
SMARCA2-229ENST00000634781 ILDR1Q86SU0 546 aaPredicted RBP10.77□□□□□ -0.69
SMARCA2-229ENST00000634781 RGL2O15211 777 aa10.76□□□□□ -0.69
SMARCA2-229ENST00000634781 DPY19L2Q6NUT2 758 aa10.76□□□□□ -0.69
SMARCA2-229ENST00000634781 TAOK2Q9UL54 1235 aa10.76□□□□□ -0.69
SMARCA2-229ENST00000634781 G3V3G9 751 aa10.74□□□□□ -0.69
SMARCA2-229ENST00000634781 HOXB3P14651 431 aaPredicted RBP10.74□□□□□ -0.69
SMARCA2-229ENST00000634781 PDAP1Q13442 181 aaKnown RBP10.73□□□□□ -0.69
SMARCA2-229ENST00000634781 BOLA1Q9Y3E2 137 aa10.72□□□□□ -0.69
SMARCA2-229ENST00000634781 HOXB1P14653 301 aaPredicted RBP10.71□□□□□ -0.69
SMARCA2-229ENST00000634781 RIOK3O14730 519 aaKnown RBP10.7□□□□□ -0.7
SMARCA2-229ENST00000634781 ZNF710Q8N1W2 664 aa10.7□□□□□ -0.7
SMARCA2-229ENST00000634781 CABP2Q9NPB3 220 aa10.7□□□□□ -0.7
SMARCA2-229ENST00000634781 ERBB3P21860 1342 aa10.68□□□□□ -0.7
SMARCA2-229ENST00000634781 DOK7Q18PE1 504 aa10.67□□□□□ -0.7
SMARCA2-229ENST00000634781 RNF166Q96A37 237 aaPredicted RBP10.65□□□□□ -0.7
SMARCA2-229ENST00000634781 RNF25Q96BH1 459 aaPredicted RBP10.65□□□□□ -0.7
SMARCA2-229ENST00000634781 VGFO15240 615 aaPredicted RBP10.64□□□□□ -0.71
SMARCA2-229ENST00000634781 CHGAP10645 457 aaKnown RBP10.62□□□□□ -0.71
SMARCA2-229ENST00000634781 RIMBP2O15034 1052 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms