RNA–Protein interactions for RNA: ENST00000630920.1

CCAT2-201, colon cancer associated transcript 2, humanhuman

BASIC

Gene CCAT2, Length 1,752 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCAT2-201ENST00000630920 TTBK1Q5TCY1 1321 aaPredicted RBP11.45□□□□□ -0.58
CCAT2-201ENST00000630920 NKX1-1Q15270 411 aaPredicted RBP11.44□□□□□ -0.58
CCAT2-201ENST00000630920 NUBP1P53384 320 aa11.44□□□□□ -0.58
CCAT2-201ENST00000630920 GSE1Q14687 1217 aa11.41□□□□□ -0.58
CCAT2-201ENST00000630920 RIOK3O14730 519 aaKnown RBP11.37□□□□□ -0.59
CCAT2-201ENST00000630920 NBR1Q14596 966 aa11.36□□□□□ -0.59
CCAT2-201ENST00000630920 GTPBP6O43824 516 aaPredicted RBP11.35□□□□□ -0.59
CCAT2-201ENST00000630920 DCAF8Q5TAQ9 597 aa11.33□□□□□ -0.59
CCAT2-201ENST00000630920 MNX1P50219 401 aaPredicted RBP11.31□□□□□ -0.6
CCAT2-201ENST00000630920 STK25O00506 426 aa11.31□□□□□ -0.6
CCAT2-201ENST00000630920 CREBZFQ9NS37 354 aa11.29□□□□□ -0.6
CCAT2-201ENST00000630920 SPDYE1Q8NFV5 336 aaPredicted RBP11.28□□□□□ -0.6
CCAT2-201ENST00000630920 FAM212AQ96EL1 285 aa11.28□□□□□ -0.6
CCAT2-201ENST00000630920 CACNB1Q02641 598 aaPredicted RBP11.26□□□□□ -0.61
CCAT2-201ENST00000630920 VGFO15240 615 aaPredicted RBP11.26□□□□□ -0.61
CCAT2-201ENST00000630920 RASEFQ8IZ41 740 aa11.26□□□□□ -0.61
CCAT2-201ENST00000630920 CLEC11AQ9Y240 323 aa11.24□□□□□ -0.61
CCAT2-201ENST00000630920 PRR29P0C7W0 189 aa11.21□□□□□ -0.61
CCAT2-201ENST00000630920 CHRM1P11229 460 aaPredicted RBP11.21□□□□□ -0.61
CCAT2-201ENST00000630920 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.21□□□□□ -0.62
CCAT2-201ENST00000630920 AKT1S1Q96B36 256 aa11.21□□□□□ -0.62
CCAT2-201ENST00000630920 ZFP91Q96JP5 570 aaPredicted RBP11.21□□□□□ -0.62
CCAT2-201ENST00000630920 BCL11BQ9C0K0 894 aaPredicted RBP11.21□□□□□ -0.62
CCAT2-201ENST00000630920 STK24Q9Y6E0 443 aa11.18□□□□□ -0.62
CCAT2-201ENST00000630920 PYGBP11216 843 aa11.17□□□□□ -0.62
CCAT2-201ENST00000630920 SGIP1Q9BQI5 828 aa11.16□□□□□ -0.62
CCAT2-201ENST00000630920 REM2Q8IYK8 340 aaPredicted RBP11.15□□□□□ -0.62
CCAT2-201ENST00000630920 RBM42Q9BTD8 480 aaKnown RBP11.15□□□□□ -0.62
CCAT2-201ENST00000630920 RYDENQ9NUL5 291 aaKnown RBP11.09□□□□□ -0.63
CCAT2-201ENST00000630920 PITPNM1O00562 1244 aa11.03□□□□□ -0.64
CCAT2-201ENST00000630920 CADPS2Q86UW7 1296 aa11.03□□□□□ -0.64
CCAT2-201ENST00000630920 TIMELESSQ9UNS1 1208 aa11.03□□□□□ -0.64
CCAT2-201ENST00000630920 P3H3Q8IVL6 736 aa11.01□□□□□ -0.65
CCAT2-201ENST00000630920 KCNV2Q8TDN2 545 aa11□□□□□ -0.65
CCAT2-201ENST00000630920 TULP1O00294 542 aaPredicted RBP10.98□□□□□ -0.65
CCAT2-201ENST00000630920 ERICH6Q7L0X2 663 aa10.97□□□□□ -0.65
CCAT2-201ENST00000630920 TSPYL2Q9H2G4 693 aaPredicted RBP10.96□□□□□ -0.65
CCAT2-201ENST00000630920 CHADLQ6NUI6 762 aa10.95□□□□□ -0.66
CCAT2-201ENST00000630920 ZNF467Q7Z7K2 595 aaPredicted RBP10.95□□□□□ -0.66
CCAT2-201ENST00000630920 GTF3C3Q9Y5Q9 886 aa10.95□□□□□ -0.66
CCAT2-201ENST00000630920 PCDHB8Q9UN66 801 aa10.93□□□□□ -0.66
CCAT2-201ENST00000630920 PCDHB13Q9Y5F0 798 aa10.93□□□□□ -0.66
CCAT2-201ENST00000630920 PDAP1Q13442 181 aaKnown RBP10.93□□□□□ -0.66
CCAT2-201ENST00000630920 MFRPQ9BY79 579 aa10.92□□□□□ -0.66
CCAT2-201ENST00000630920 WDR70Q9NW82 654 aa10.91□□□□□ -0.66
CCAT2-201ENST00000630920 LMOD2Q6P5Q4 547 aa10.9□□□□□ -0.67
CCAT2-201ENST00000630920 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.9□□□□□ -0.67
CCAT2-201ENST00000630920 TMEM132AQ24JP5 1023 aa10.87□□□□□ -0.67
CCAT2-201ENST00000630920 FARP1Q9Y4F1 1045 aaPredicted RBP10.87□□□□□ -0.67
CCAT2-201ENST00000630920 CCDC61Q9Y6R9 512 aa10.87□□□□□ -0.67
CCAT2-201ENST00000630920 PSEN1P49768 467 aa10.85□□□□□ -0.67
CCAT2-201ENST00000630920 PPP1R37O75864 691 aa10.84□□□□□ -0.67
CCAT2-201ENST00000630920 ZNF579Q8NAF0 562 aaKnown RBP10.81□□□□□ -0.68
CCAT2-201ENST00000630920 BCL11AQ9H165 835 aa10.81□□□□□ -0.68
CCAT2-201ENST00000630920 FBXO22Q8NEZ5 403 aa10.79□□□□□ -0.68
CCAT2-201ENST00000630920 IFNL1Q8IU54 200 aa10.78□□□□□ -0.68
CCAT2-201ENST00000630920 EFCAB3Q8N7B9 438 aa10.77□□□□□ -0.68
CCAT2-201ENST00000630920 ARHGEF1Q92888 912 aaKnown RBP10.77□□□□□ -0.69
CCAT2-201ENST00000630920 HRCP23327 699 aa10.76□□□□□ -0.69
CCAT2-201ENST00000630920 SEMA3EO15041 775 aa10.75□□□□□ -0.69
CCAT2-201ENST00000630920 BRPF1P55201 1214 aaPredicted RBP10.75□□□□□ -0.69
CCAT2-201ENST00000630920 PRKAR2AP13861 404 aaKnown RBP10.74□□□□□ -0.69
CCAT2-201ENST00000630920 E2F4Q16254 413 aa10.74□□□□□ -0.69
CCAT2-201ENST00000630920 CABP2Q9NPB3 220 aa10.74□□□□□ -0.69
CCAT2-201ENST00000630920 PHF8Q9UPP1 1060 aa10.74□□□□□ -0.69
CCAT2-201ENST00000630920 ZC3H15Q8WU90 426 aaKnown RBP10.73□□□□□ -0.69
CCAT2-201ENST00000630920 MAP3K13O43283 966 aa10.72□□□□□ -0.69
CCAT2-201ENST00000630920 NLRP6P59044 892 aa10.71□□□□□ -0.69
CCAT2-201ENST00000630920 NCKAP5LQ9HCH0 1330 aa10.71□□□□□ -0.7
CCAT2-201ENST00000630920 TESPA1A2RU30 521 aaPredicted RBP10.7□□□□□ -0.7
CCAT2-201ENST00000630920 SOX12O15370 315 aa10.68□□□□□ -0.7
CCAT2-201ENST00000630920 FAM9AQ8IZU1 332 aaPredicted RBP10.68□□□□□ -0.7
CCAT2-201ENST00000630920 KIF12Q96FN5 646 aa10.68□□□□□ -0.7
CCAT2-201ENST00000630920 SLC24A3Q9HC58 644 aa10.65□□□□□ -0.7
CCAT2-201ENST00000630920 FXR2P51116 673 aaKnown RBP eCLIP10.65□□□□□ -0.71
CCAT2-201ENST00000630920 MS4A4AQ96JQ5 239 aa10.65□□□□□ -0.71
CCAT2-201ENST00000630920 DAXXQ9UER7 740 aaPredicted RBP10.65□□□□□ -0.71
CCAT2-201ENST00000630920 PAK3O75914 559 aaPredicted RBP10.63□□□□□ -0.71
CCAT2-201ENST00000630920 C14orf37Q86TY3 774 aa10.63□□□□□ -0.71
CCAT2-201ENST00000630920 LARP6Q9BRS8 491 aaKnown RBP10.63□□□□□ -0.71
CCAT2-201ENST00000630920 NEUROD2Q15784 382 aa10.62□□□□□ -0.71
CCAT2-201ENST00000630920 MFSD10Q14728 455 aa10.6□□□□□ -0.71
CCAT2-201ENST00000630920 CRISPLD2Q9H0B8 497 aa10.6□□□□□ -0.71
CCAT2-201ENST00000630920 ZMYND10O75800 440 aa10.58□□□□□ -0.72
CCAT2-201ENST00000630920 ARXQ96QS3 562 aa10.58□□□□□ -0.72
CCAT2-201ENST00000630920 PDE4AP27815 886 aa10.56□□□□□ -0.72
CCAT2-201ENST00000630920 DDX27Q96GQ7 796 aaKnown RBP10.56□□□□□ -0.72
CCAT2-201ENST00000630920 ARIH1Q9Y4X5 557 aaPredicted RBP10.54□□□□□ -0.72
CCAT2-201ENST00000630920 CAMK2BQ13554 666 aa10.53□□□□□ -0.72
CCAT2-201ENST00000630920 PHF12Q96QT6 1004 aa10.53□□□□□ -0.72
CCAT2-201ENST00000630920 PIP4P2Q8N4L2 257 aa10.52□□□□□ -0.72
CCAT2-201ENST00000630920 ZRANB1Q9UGI0 708 aa10.51□□□□□ -0.73
CCAT2-201ENST00000630920 SMYD5Q6GMV2 418 aa10.5□□□□□ -0.73
CCAT2-201ENST00000630920 TRPC6Q9Y210 931 aa10.49□□□□□ -0.73
CCAT2-201ENST00000630920 TMEM106CQ9BVX2 250 aa10.49□□□□□ -0.73
CCAT2-201ENST00000630920 MLLT3P42568 568 aaPredicted RBP10.48□□□□□ -0.73
CCAT2-201ENST00000630920 RBM26Q5T8P6 1007 aaKnown RBP10.48□□□□□ -0.73
CCAT2-201ENST00000630920 CHRDL2Q6WN34 429 aa10.48□□□□□ -0.73
CCAT2-201ENST00000630920 BARGINQ6ZT62 677 aa10.48□□□□□ -0.73
CCAT2-201ENST00000630920 CD44P16070 742 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms