RNA–Protein interactions for RNA: ENST00000629387.2

TCF4-268, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-268ENST00000629387 ZMYND15Q9H091 742 aa8.55□□□□□ -1.04
TCF4-268ENST00000629387 ARID3AQ99856 593 aa8.53□□□□□ -1.04
TCF4-268ENST00000629387 HMGB1P09429 215 aaKnown RBP8.49□□□□□ -1.05
TCF4-268ENST00000629387 BCCIPQ9P287 314 aaKnown RBP eCLIP8.49□□□□□ -1.05
TCF4-268ENST00000629387 RSPH4AQ5TD94 716 aa8.49□□□□□ -1.05
TCF4-268ENST00000629387 FBLN2P98095 1184 aa8.48□□□□□ -1.05
TCF4-268ENST00000629387 ZNF526Q8TF50 670 aaPredicted RBP8.48□□□□□ -1.05
TCF4-268ENST00000629387 PPP4R3CPQ6ZMV5 832 aa8.48□□□□□ -1.05
TCF4-268ENST00000629387 RSPH6AQ9H0K4 717 aa8.48□□□□□ -1.05
TCF4-268ENST00000629387 PRDM10Q9NQV6 1147 aa8.47□□□□□ -1.05
TCF4-268ENST00000629387 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.47□□□□□ -1.05
TCF4-268ENST00000629387 FOXD1Q16676 465 aa8.47□□□□□ -1.05
TCF4-268ENST00000629387 NAP1L2Q9ULW6 460 aaPredicted RBP8.45□□□□□ -1.06
TCF4-268ENST00000629387 NCLP19338 710 aaKnown RBP8.43□□□□□ -1.06
TCF4-268ENST00000629387 BRPF3Q9ULD4 1205 aa8.43□□□□□ -1.06
TCF4-268ENST00000629387 ZNF592Q92610 1267 aa8.42□□□□□ -1.06
TCF4-268ENST00000629387 CHMP4BQ9H444 224 aaKnown RBP8.4□□□□□ -1.06
TCF4-268ENST00000629387 CNPY4Q8N129 248 aa8.4□□□□□ -1.07
TCF4-268ENST00000629387 RTL5Q5HYW3 569 aaPredicted RBP8.39□□□□□ -1.07
TCF4-268ENST00000629387 ZFP91Q96JP5 570 aaPredicted RBP8.38□□□□□ -1.07
TCF4-268ENST00000629387 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.38□□□□□ -1.07
TCF4-268ENST00000629387 PCGF6Q9BYE7 350 aa8.38□□□□□ -1.07
TCF4-268ENST00000629387 KDM2AQ9Y2K7 1162 aa8.37□□□□□ -1.07
TCF4-268ENST00000629387 WWC1Q8IX03 1113 aa8.36□□□□□ -1.07
TCF4-268ENST00000629387 YTHDC1Q96MU7 727 aaKnown RBP8.36□□□□□ -1.07
TCF4-268ENST00000629387 ARID4BQ4LE39 1312 aaPredicted RBP8.35□□□□□ -1.07
TCF4-268ENST00000629387 BBXQ8WY36 941 aaPredicted RBP8.34□□□□□ -1.08
TCF4-268ENST00000629387 PSMD1Q99460 953 aa8.33□□□□□ -1.08
TCF4-268ENST00000629387 PTMSP20962 102 aa8.31□□□□□ -1.08
TCF4-268ENST00000629387 TICAM2Q86XR7 235 aa8.31□□□□□ -1.08
TCF4-268ENST00000629387 PATL2C9JE40 543 aaKnown RBP8.29□□□□□ -1.08
TCF4-268ENST00000629387 TMED8Q6PL24 325 aaPredicted RBP8.28□□□□□ -1.08
TCF4-268ENST00000629387 CWC22Q9HCG8 908 aaKnown RBP8.28□□□□□ -1.08
TCF4-268ENST00000629387 SECISBP2LQ93073 1101 aaKnown RBP8.27□□□□□ -1.08
TCF4-268ENST00000629387 CLSTN1O94985 981 aa8.27□□□□□ -1.09
TCF4-268ENST00000629387 CANXP27824 592 aaKnown RBP8.27□□□□□ -1.09
TCF4-268ENST00000629387 PLCD4Q9BRC7 762 aa8.27□□□□□ -1.09
TCF4-268ENST00000629387 CNGB1Q14028 1251 aaPredicted RBP8.26□□□□□ -1.09
TCF4-268ENST00000629387 ABCC9O60706 1549 aa8.25□□□□□ -1.09
TCF4-268ENST00000629387 USP35Q9P2H5 1018 aa8.24□□□□□ -1.09
TCF4-268ENST00000629387 PUS7Q96PZ0 661 aaKnown RBP8.24□□□□□ -1.09
TCF4-268ENST00000629387 ZBTB7CA1YPR0 619 aa8.24□□□□□ -1.09
TCF4-268ENST00000629387 IPO4Q8TEX9 1081 aaKnown RBP8.24□□□□□ -1.09
TCF4-268ENST00000629387 PPM1GO15355 546 aaPredicted RBP8.23□□□□□ -1.09
TCF4-268ENST00000629387 ZNF428Q96B54 188 aa8.23□□□□□ -1.09
TCF4-268ENST00000629387 OS9Q13438 667 aaPredicted RBP8.22□□□□□ -1.09
TCF4-268ENST00000629387 TSHZ2Q9NRE2 1034 aa8.22□□□□□ -1.09
TCF4-268ENST00000629387 FTSJ3Q8IY81 847 aaKnown RBP8.21□□□□□ -1.1
TCF4-268ENST00000629387 TEX2Q8IWB9 1127 aa8.2□□□□□ -1.1
TCF4-268ENST00000629387 IL27Q8NEV9 243 aa8.2□□□□□ -1.1
TCF4-268ENST00000629387 NBR1Q14596 966 aa8.2□□□□□ -1.1
TCF4-268ENST00000629387 CERS3Q8IU89 383 aa8.2□□□□□ -1.1
TCF4-268ENST00000629387 FOXD4L1Q9NU39 408 aa8.18□□□□□ -1.1
TCF4-268ENST00000629387 RBM25P49756 843 aaKnown RBP8.17□□□□□ -1.1
TCF4-268ENST00000629387 PLCD3Q8N3E9 789 aa8.17□□□□□ -1.1
TCF4-268ENST00000629387 PTMAP06454 111 aaKnown RBP8.17□□□□□ -1.1
TCF4-268ENST00000629387 FAM193AP78312 1265 aa8.16□□□□□ -1.1
TCF4-268ENST00000629387 CCER1Q8TC90 406 aaPredicted RBP8.14□□□□□ -1.11
TCF4-268ENST00000629387 FAM43BQ6ZT52 329 aaPredicted RBP8.14□□□□□ -1.11
TCF4-268ENST00000629387 RAD21O60216 631 aa8.13□□□□□ -1.11
TCF4-268ENST00000629387 APPP05067 770 aa8.13□□□□□ -1.11
TCF4-268ENST00000629387 FAM9BQ8IZU0 186 aa8.12□□□□□ -1.11
TCF4-268ENST00000629387 NECTIN2Q92692 538 aa8.12□□□□□ -1.11
TCF4-268ENST00000629387 PRDM16Q9HAZ2 1276 aa8.11□□□□□ -1.11
TCF4-268ENST00000629387 HSP90AA2PQ14568 343 aaPredicted RBP8.1□□□□□ -1.11
TCF4-268ENST00000629387 FOXD4L5Q5VV16 416 aaPredicted RBP8.1□□□□□ -1.11
TCF4-268ENST00000629387 FOXD4L4Q8WXT5 416 aaPredicted RBP8.1□□□□□ -1.11
TCF4-268ENST00000629387 KCNG1Q9UIX4 513 aa8.1□□□□□ -1.11
TCF4-268ENST00000629387 FAM50AQ14320 339 aaKnown RBP8.1□□□□□ -1.11
TCF4-268ENST00000629387 TRHP20396 242 aaPredicted RBP8.08□□□□□ -1.12
TCF4-268ENST00000629387 ANAPC15P60006 121 aa8.08□□□□□ -1.12
TCF4-268ENST00000629387 ZNF692Q9BU19 519 aaPredicted RBP8.08□□□□□ -1.12
TCF4-268ENST00000629387 KCTD17Q8N5Z5 321 aa8.08□□□□□ -1.12
TCF4-268ENST00000629387 GPATCH11Q8N954 259 aa8.08□□□□□ -1.12
TCF4-268ENST00000629387 PIAS4Q8N2W9 510 aaPredicted RBP8.07□□□□□ -1.12
TCF4-268ENST00000629387 NEFMP07197 916 aa8.07□□□□□ -1.12
TCF4-268ENST00000629387 GTF2E1P29083 439 aaPredicted RBP8.07□□□□□ -1.12
TCF4-268ENST00000629387 KDM4AO75164 1064 aa8.06□□□□□ -1.12
TCF4-268ENST00000629387 TRIM41Q8WV44 630 aa8.06□□□□□ -1.12
TCF4-268ENST00000629387 SOX12O15370 315 aa8.05□□□□□ -1.12
TCF4-268ENST00000629387 ARID3CA6NKF2 412 aa8.04□□□□□ -1.12
TCF4-268ENST00000629387 FAM177A1Q8N128 213 aaPredicted RBP8.04□□□□□ -1.12
TCF4-268ENST00000629387 RNF216Q9NWF9 866 aaPredicted RBP8.04□□□□□ -1.12
TCF4-268ENST00000629387 MAPK8IP2Q13387 824 aaPredicted RBP8.03□□□□□ -1.12
TCF4-268ENST00000629387 NPM1P06748 294 aaKnown RBP eCLIP8.02□□□□□ -1.12
TCF4-268ENST00000629387 CCDC27Q2M243 656 aa8.02□□□□□ -1.13
TCF4-268ENST00000629387 STAC3Q96MF2 364 aa8.02□□□□□ -1.13
TCF4-268ENST00000629387 PABPN1Q86U42 306 aaKnown RBP eCLIP8.01□□□□□ -1.13
TCF4-268ENST00000629387 MTMR7Q9Y216 660 aa8.01□□□□□ -1.13
TCF4-268ENST00000629387 CUX2O14529 1486 aa8.01□□□□□ -1.13
TCF4-268ENST00000629387 CLGNO14967 610 aa8□□□□□ -1.13
TCF4-268ENST00000629387 MCCP23508 829 aa8□□□□□ -1.13
TCF4-268ENST00000629387 RGS3P49796 1198 aa8□□□□□ -1.13
TCF4-268ENST00000629387 RRP9O43818 475 aaKnown RBP7.99□□□□□ -1.13
TCF4-268ENST00000629387 AEBP1Q8IUX7 1158 aa7.99□□□□□ -1.13
TCF4-268ENST00000629387 CHRM1P11229 460 aaPredicted RBP7.98□□□□□ -1.13
TCF4-268ENST00000629387 SETQ01105 290 aaPredicted RBP7.98□□□□□ -1.13
TCF4-268ENST00000629387 RBM19Q9Y4C8 960 aaKnown RBP7.98□□□□□ -1.13
TCF4-268ENST00000629387 HDAC5Q9UQL6 1122 aa7.97□□□□□ -1.13
TCF4-268ENST00000629387 GRIPAP1Q4V328 841 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms