RNA–Protein interactions for RNA: ENST00000627247.2

LINC01828-209, Transcript of long intergenic non-protein coding RNA 1828, humanhuman

TSL 5

Gene LINC01828, Length 463 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01828-209ENST00000627247 ZRANB1Q9UGI0 708 aa18.47■□□□□ 0.55
LINC01828-209ENST00000627247 RTN4Q9NQC3 1192 aaKnown RBP18.42■□□□□ 0.54
LINC01828-209ENST00000627247 PKD2Q13563 968 aa18.39■□□□□ 0.53
LINC01828-209ENST00000627247 CCDC61Q9Y6R9 512 aa18.39■□□□□ 0.53
LINC01828-209ENST00000627247 EVX2Q03828 476 aa18.38■□□□□ 0.53
LINC01828-209ENST00000627247 TRIM41Q8WV44 630 aa18.35■□□□□ 0.53
LINC01828-209ENST00000627247 ZNF579Q8NAF0 562 aaKnown RBP18.31■□□□□ 0.52
LINC01828-209ENST00000627247 PYGBP11216 843 aa18.3■□□□□ 0.52
LINC01828-209ENST00000627247 ECM2O94769 699 aaPredicted RBP18.29■□□□□ 0.52
LINC01828-209ENST00000627247 CHRM1P11229 460 aaPredicted RBP18.28■□□□□ 0.52
LINC01828-209ENST00000627247 PHF12Q96QT6 1004 aa18.27■□□□□ 0.52
LINC01828-209ENST00000627247 KIF12Q96FN5 646 aa18.22■□□□□ 0.51
LINC01828-209ENST00000627247 MAP3K13O43283 966 aa18.18■□□□□ 0.5
LINC01828-209ENST00000627247 CLCN6P51797 869 aa18.17■□□□□ 0.5
LINC01828-209ENST00000627247 SGIP1Q9BQI5 828 aa18.15■□□□□ 0.5
LINC01828-209ENST00000627247 PCDHB13Q9Y5F0 798 aa18.14■□□□□ 0.49
LINC01828-209ENST00000627247 RGL2O15211 777 aa18.1■□□□□ 0.49
LINC01828-209ENST00000627247 SP7Q8TDD2 431 aaPredicted RBP18.1■□□□□ 0.49
LINC01828-209ENST00000627247 ZNF467Q7Z7K2 595 aaPredicted RBP18.08■□□□□ 0.48
LINC01828-209ENST00000627247 RNF25Q96BH1 459 aaPredicted RBP18.06■□□□□ 0.48
LINC01828-209ENST00000627247 MS4A3Q96HJ5 214 aa18.06■□□□□ 0.48
LINC01828-209ENST00000627247 GABBR2O75899 941 aa18.05■□□□□ 0.48
LINC01828-209ENST00000627247 IFNL1Q8IU54 200 aa18.05■□□□□ 0.48
LINC01828-209ENST00000627247 RIOK3O14730 519 aaKnown RBP18.04■□□□□ 0.48
LINC01828-209ENST00000627247 PCDHB8Q9UN66 801 aa18.04■□□□□ 0.48
LINC01828-209ENST00000627247 GALR2O43603 387 aaPredicted RBP18.01■□□□□ 0.47
LINC01828-209ENST00000627247 TAOK2Q9UL54 1235 aa17.98■□□□□ 0.47
LINC01828-209ENST00000627247 DCAF8L2P0C7V8 631 aa17.95■□□□□ 0.46
LINC01828-209ENST00000627247 VGFO15240 615 aaPredicted RBP17.94■□□□□ 0.46
LINC01828-209ENST00000627247 PDAP1Q13442 181 aaKnown RBP17.91■□□□□ 0.46
LINC01828-209ENST00000627247 PSEN1P49768 467 aa17.88■□□□□ 0.45
LINC01828-209ENST00000627247 TRPC6Q9Y210 931 aa17.88■□□□□ 0.45
LINC01828-209ENST00000627247 TIE1P35590 1138 aa17.84■□□□□ 0.45
LINC01828-209ENST00000627247 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.83■□□□□ 0.44
LINC01828-209ENST00000627247 ZFP91Q96JP5 570 aaPredicted RBP17.83■□□□□ 0.44
LINC01828-209ENST00000627247 DCBLD2Q96PD2 775 aa17.81■□□□□ 0.44
LINC01828-209ENST00000627247 TMEM106CQ9BVX2 250 aa17.8■□□□□ 0.44
LINC01828-209ENST00000627247 BMP2KQ9NSY1 1161 aaPredicted RBP17.78■□□□□ 0.44
LINC01828-209ENST00000627247 STK25O00506 426 aa17.77■□□□□ 0.44
LINC01828-209ENST00000627247 CHGAP10645 457 aaKnown RBP17.77■□□□□ 0.44
LINC01828-209ENST00000627247 TTLL13PA6NNM8 815 aa17.75■□□□□ 0.43
LINC01828-209ENST00000627247 BCL11BQ9C0K0 894 aaPredicted RBP17.73■□□□□ 0.43
LINC01828-209ENST00000627247 HS6ST3Q8IZP7 471 aa17.72■□□□□ 0.43
LINC01828-209ENST00000627247 STK24Q9Y6E0 443 aa17.72■□□□□ 0.43
LINC01828-209ENST00000627247 ATMINO43313 823 aaPredicted RBP17.71■□□□□ 0.43
LINC01828-209ENST00000627247 ASTLQ6HA08 431 aaPredicted RBP17.71■□□□□ 0.43
LINC01828-209ENST00000627247 ATN1P54259 1190 aaPredicted RBP17.68■□□□□ 0.42
LINC01828-209ENST00000627247 CABP2Q9NPB3 220 aa17.66■□□□□ 0.42
LINC01828-209ENST00000627247 POTEIP0CG38 1075 aa17.65■□□□□ 0.42
LINC01828-209ENST00000627247 TRIM35Q9UPQ4 493 aa17.65■□□□□ 0.42
LINC01828-209ENST00000627247 GOLGA2Q08379 1002 aa17.64■□□□□ 0.41
LINC01828-209ENST00000627247 MKRN3Q13064 507 aaKnown RBP17.57■□□□□ 0.4
LINC01828-209ENST00000627247 PELP1Q8IZL8 1130 aaKnown RBP17.57■□□□□ 0.4
LINC01828-209ENST00000627247 EFCAB3Q8N7B9 438 aa17.56■□□□□ 0.4
LINC01828-209ENST00000627247 DNAJC5Q9H3Z4 198 aa17.55■□□□□ 0.4
LINC01828-209ENST00000627247 BBXQ8WY36 941 aaPredicted RBP17.53■□□□□ 0.4
LINC01828-209ENST00000627247 SOX12O15370 315 aa17.5■□□□□ 0.39
LINC01828-209ENST00000627247 IER5LQ5T953 404 aa17.5■□□□□ 0.39
LINC01828-209ENST00000627247 SLC39A7Q92504 469 aa17.5■□□□□ 0.39
LINC01828-209ENST00000627247 C7P10643 843 aa17.46■□□□□ 0.39
LINC01828-209ENST00000627247 NKX1-1Q15270 411 aaPredicted RBP17.45■□□□□ 0.38
LINC01828-209ENST00000627247 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.45■□□□□ 0.38
LINC01828-209ENST00000627247 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.42■□□□□ 0.38
LINC01828-209ENST00000627247 METRNQ9UJH8 293 aa17.41■□□□□ 0.38
LINC01828-209ENST00000627247 MFRPQ9BY79 579 aa17.4■□□□□ 0.38
LINC01828-209ENST00000627247 PHF8Q9UPP1 1060 aa17.4■□□□□ 0.38
LINC01828-209ENST00000627247 SEC24BO95487 1268 aa17.39■□□□□ 0.37
LINC01828-209ENST00000627247 NLRP6P59044 892 aa17.39■□□□□ 0.37
LINC01828-209ENST00000627247 IRX5P78411 483 aaPredicted RBP17.39■□□□□ 0.37
LINC01828-209ENST00000627247 OCEL1Q9H607 264 aa17.38■□□□□ 0.37
LINC01828-209ENST00000627247 RYDENQ9NUL5 291 aaKnown RBP17.36■□□□□ 0.37
LINC01828-209ENST00000627247 PLCG2P16885 1265 aa17.35■□□□□ 0.37
LINC01828-209ENST00000627247 ILDR1Q86SU0 546 aaPredicted RBP17.35■□□□□ 0.37
LINC01828-209ENST00000627247 FBXO22Q8NEZ5 403 aa17.34■□□□□ 0.37
LINC01828-209ENST00000627247 COLQQ9Y215 455 aaPredicted RBP17.33■□□□□ 0.36
LINC01828-209ENST00000627247 GTPBP6O43824 516 aaPredicted RBP17.31■□□□□ 0.36
LINC01828-209ENST00000627247 SPRYD3Q8NCJ5 442 aa17.31■□□□□ 0.36
LINC01828-209ENST00000627247 POTEFA5A3E0 1075 aa17.3■□□□□ 0.36
LINC01828-209ENST00000627247 PDCD7Q8N8D1 485 aaKnown RBP17.29■□□□□ 0.36
LINC01828-209ENST00000627247 PAXIP1Q6ZW49 1069 aaPredicted RBP17.28■□□□□ 0.36
LINC01828-209ENST00000627247 MS4A4AQ96JQ5 239 aa17.28■□□□□ 0.36
LINC01828-209ENST00000627247 CFAP44Q96MT7 982 aa17.26■□□□□ 0.35
LINC01828-209ENST00000627247 DPY19L2Q6NUT2 758 aa17.23■□□□□ 0.35
LINC01828-209ENST00000627247 PLCB2Q00722 1185 aa17.18■□□□□ 0.34
LINC01828-209ENST00000627247 PPP1R37O75864 691 aa17.17■□□□□ 0.34
LINC01828-209ENST00000627247 L3MBTL3Q96JM7 780 aaPredicted RBP17.17■□□□□ 0.34
LINC01828-209ENST00000627247 G3V3G9 751 aa17.13■□□□□ 0.33
LINC01828-209ENST00000627247 BOLA1Q9Y3E2 137 aa17.11■□□□□ 0.33
LINC01828-209ENST00000627247 POTEB2H3BUK9 544 aa17.1■□□□□ 0.33
LINC01828-209ENST00000627247 MICALL2Q8IY33 904 aa17.05■□□□□ 0.32
LINC01828-209ENST00000627247 TMEM121BQ9BXQ6 578 aaPredicted RBP17.04■□□□□ 0.32
LINC01828-209ENST00000627247 POTEJP0CG39 1038 aa17.01■□□□□ 0.31
LINC01828-209ENST00000627247 LHX8Q68G74 356 aa17.01■□□□□ 0.31
LINC01828-209ENST00000627247 MAMSTRQ6ZN01 415 aa16.97■□□□□ 0.31
LINC01828-209ENST00000627247 C3orf67Q6ZVT6 689 aa16.96■□□□□ 0.31
LINC01828-209ENST00000627247 HAP1P54257 671 aaPredicted RBP16.93■□□□□ 0.3
LINC01828-209ENST00000627247 SCUBE2Q9NQ36 999 aa16.93■□□□□ 0.3
LINC01828-209ENST00000627247 TSHZ2Q9NRE2 1034 aa16.93■□□□□ 0.3
LINC01828-209ENST00000627247 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.93■□□□□ 0.3
LINC01828-209ENST00000627247 CADPS2Q86UW7 1296 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms