RNA–Protein interactions for RNA: ENST00000625237.1

LINC01440-207, Transcript of long intergenic non-protein coding RNA 1440, humanhuman

TSL 5

Gene LINC01440, Length 622 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01440-207ENST00000625237 PAXIP1Q6ZW49 1069 aaPredicted RBP13.45□□□□□ -0.26
LINC01440-207ENST00000625237 VSIG10Q8N0Z9 540 aa13.43□□□□□ -0.26
LINC01440-207ENST00000625237 SPRYD3Q8NCJ5 442 aa13.42□□□□□ -0.26
LINC01440-207ENST00000625237 CFAP44Q96MT7 982 aa13.42□□□□□ -0.26
LINC01440-207ENST00000625237 RIOK3O14730 519 aaKnown RBP13.4□□□□□ -0.26
LINC01440-207ENST00000625237 CHRM1P11229 460 aaPredicted RBP13.4□□□□□ -0.26
LINC01440-207ENST00000625237 RASEFQ8IZ41 740 aa13.4□□□□□ -0.26
LINC01440-207ENST00000625237 HS6ST3Q8IZP7 471 aa13.4□□□□□ -0.26
LINC01440-207ENST00000625237 RNF25Q96BH1 459 aaPredicted RBP13.39□□□□□ -0.27
LINC01440-207ENST00000625237 DNAJC5Q9H3Z4 198 aa13.33□□□□□ -0.28
LINC01440-207ENST00000625237 VGFO15240 615 aaPredicted RBP13.32□□□□□ -0.28
LINC01440-207ENST00000625237 CHADLQ6NUI6 762 aa13.3□□□□□ -0.28
LINC01440-207ENST00000625237 FARP1Q9Y4F1 1045 aaPredicted RBP13.28□□□□□ -0.28
LINC01440-207ENST00000625237 PYGBP11216 843 aa13.26□□□□□ -0.29
LINC01440-207ENST00000625237 SGIP1Q9BQI5 828 aa13.26□□□□□ -0.29
LINC01440-207ENST00000625237 STK25O00506 426 aa13.24□□□□□ -0.29
LINC01440-207ENST00000625237 PRKAR2AP13861 404 aaKnown RBP13.24□□□□□ -0.29
LINC01440-207ENST00000625237 FXR2P51116 673 aaKnown RBP eCLIP13.23□□□□□ -0.29
LINC01440-207ENST00000625237 TSPYL2Q9H2G4 693 aaPredicted RBP13.21□□□□□ -0.29
LINC01440-207ENST00000625237 BCANQ96GW7 911 aa13.2□□□□□ -0.3
LINC01440-207ENST00000625237 ZNF467Q7Z7K2 595 aaPredicted RBP13.18□□□□□ -0.3
LINC01440-207ENST00000625237 TSHZ2Q9NRE2 1034 aa13.18□□□□□ -0.3
LINC01440-207ENST00000625237 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.17□□□□□ -0.3
LINC01440-207ENST00000625237 ZFP91Q96JP5 570 aaPredicted RBP13.17□□□□□ -0.3
LINC01440-207ENST00000625237 KDM2AQ9Y2K7 1162 aa13.17□□□□□ -0.3
LINC01440-207ENST00000625237 CHRDL2Q6WN34 429 aa13.16□□□□□ -0.3
LINC01440-207ENST00000625237 BCL11BQ9C0K0 894 aaPredicted RBP13.15□□□□□ -0.3
LINC01440-207ENST00000625237 RYDENQ9NUL5 291 aaKnown RBP13.15□□□□□ -0.3
LINC01440-207ENST00000625237 STK24Q9Y6E0 443 aa13.15□□□□□ -0.3
LINC01440-207ENST00000625237 PAK3O75914 559 aaPredicted RBP13.14□□□□□ -0.31
LINC01440-207ENST00000625237 NKX1-1Q15270 411 aaPredicted RBP13.14□□□□□ -0.31
LINC01440-207ENST00000625237 CCDC61Q9Y6R9 512 aa13.1□□□□□ -0.31
LINC01440-207ENST00000625237 GTPBP6O43824 516 aaPredicted RBP13.09□□□□□ -0.31
LINC01440-207ENST00000625237 PIP4P2Q8N4L2 257 aa13.08□□□□□ -0.32
LINC01440-207ENST00000625237 PDAP1Q13442 181 aaKnown RBP13.07□□□□□ -0.32
LINC01440-207ENST00000625237 ZNF579Q8NAF0 562 aaKnown RBP13.04□□□□□ -0.32
LINC01440-207ENST00000625237 PCDHB8Q9UN66 801 aa13□□□□□ -0.33
LINC01440-207ENST00000625237 PCDHB13Q9Y5F0 798 aa13□□□□□ -0.33
LINC01440-207ENST00000625237 PSEN1P49768 467 aa12.97□□□□□ -0.33
LINC01440-207ENST00000625237 KIF12Q96FN5 646 aa12.93□□□□□ -0.34
LINC01440-207ENST00000625237 MAP3K13O43283 966 aa12.91□□□□□ -0.34
LINC01440-207ENST00000625237 IFNL1Q8IU54 200 aa12.91□□□□□ -0.34
LINC01440-207ENST00000625237 ZRANB1Q9UGI0 708 aa12.91□□□□□ -0.34
LINC01440-207ENST00000625237 CD44P16070 742 aaKnown RBP12.9□□□□□ -0.34
LINC01440-207ENST00000625237 NBR1Q14596 966 aa12.85□□□□□ -0.35
LINC01440-207ENST00000625237 SOX12O15370 315 aa12.81□□□□□ -0.36
LINC01440-207ENST00000625237 MFRPQ9BY79 579 aa12.81□□□□□ -0.36
LINC01440-207ENST00000625237 CABP2Q9NPB3 220 aa12.8□□□□□ -0.36
LINC01440-207ENST00000625237 NLRP6P59044 892 aa12.79□□□□□ -0.36
LINC01440-207ENST00000625237 PHF12Q96QT6 1004 aa12.78□□□□□ -0.36
LINC01440-207ENST00000625237 EFCAB3Q8N7B9 438 aa12.77□□□□□ -0.37
LINC01440-207ENST00000625237 C19orf67A6NJJ6 358 aa12.75□□□□□ -0.37
LINC01440-207ENST00000625237 P3H3Q8IVL6 736 aa12.74□□□□□ -0.37
LINC01440-207ENST00000625237 WDR70Q9NW82 654 aa12.74□□□□□ -0.37
LINC01440-207ENST00000625237 GOLGA2Q08379 1002 aa12.71□□□□□ -0.37
LINC01440-207ENST00000625237 FBXO22Q8NEZ5 403 aa12.71□□□□□ -0.37
LINC01440-207ENST00000625237 PHF8Q9UPP1 1060 aa12.7□□□□□ -0.38
LINC01440-207ENST00000625237 PRKCSHP14314 528 aaPredicted RBP12.69□□□□□ -0.38
LINC01440-207ENST00000625237 TPRNQ4KMQ1 711 aa12.69□□□□□ -0.38
LINC01440-207ENST00000625237 TMEM106CQ9BVX2 250 aa12.68□□□□□ -0.38
LINC01440-207ENST00000625237 CADPS2Q86UW7 1296 aa12.67□□□□□ -0.38
LINC01440-207ENST00000625237 MS4A3Q96HJ5 214 aa12.67□□□□□ -0.38
LINC01440-207ENST00000625237 PPP1R37O75864 691 aa12.64□□□□□ -0.39
LINC01440-207ENST00000625237 TIE1P35590 1138 aa12.62□□□□□ -0.39
LINC01440-207ENST00000625237 MKRN3Q13064 507 aaKnown RBP12.62□□□□□ -0.39
LINC01440-207ENST00000625237 CLCN6P51797 869 aa12.61□□□□□ -0.39
LINC01440-207ENST00000625237 TRPC6Q9Y210 931 aa12.58□□□□□ -0.4
LINC01440-207ENST00000625237 KCNV2Q8TDN2 545 aa12.55□□□□□ -0.4
LINC01440-207ENST00000625237 MS4A4AQ96JQ5 239 aa12.55□□□□□ -0.4
LINC01440-207ENST00000625237 TTLL13PA6NNM8 815 aa12.54□□□□□ -0.4
LINC01440-207ENST00000625237 HAX1O00165 279 aa12.54□□□□□ -0.4
LINC01440-207ENST00000625237 PDE4AP27815 886 aa12.52□□□□□ -0.41
LINC01440-207ENST00000625237 E2F4Q16254 413 aa12.5□□□□□ -0.41
LINC01440-207ENST00000625237 BMP2KQ9NSY1 1161 aaPredicted RBP12.5□□□□□ -0.41
LINC01440-207ENST00000625237 ARHGEF1Q92888 912 aaKnown RBP12.48□□□□□ -0.41
LINC01440-207ENST00000625237 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.48□□□□□ -0.41
LINC01440-207ENST00000625237 GALR2O43603 387 aaPredicted RBP12.47□□□□□ -0.41
LINC01440-207ENST00000625237 TRIM35Q9UPQ4 493 aa12.47□□□□□ -0.41
LINC01440-207ENST00000625237 ILDR1Q86SU0 546 aaPredicted RBP12.46□□□□□ -0.41
LINC01440-207ENST00000625237 NCKAP5LQ9HCH0 1330 aa12.45□□□□□ -0.42
LINC01440-207ENST00000625237 LARP6Q9BRS8 491 aaKnown RBP12.45□□□□□ -0.42
LINC01440-207ENST00000625237 EVX2Q03828 476 aa12.44□□□□□ -0.42
LINC01440-207ENST00000625237 MFSD10Q14728 455 aa12.44□□□□□ -0.42
LINC01440-207ENST00000625237 CRISPLD2Q9H0B8 497 aa12.44□□□□□ -0.42
LINC01440-207ENST00000625237 TULP1O00294 542 aaPredicted RBP12.43□□□□□ -0.42
LINC01440-207ENST00000625237 DDX27Q96GQ7 796 aaKnown RBP12.42□□□□□ -0.42
LINC01440-207ENST00000625237 IER5LQ5T953 404 aa12.36□□□□□ -0.43
LINC01440-207ENST00000625237 ATN1P54259 1190 aaPredicted RBP12.35□□□□□ -0.43
LINC01440-207ENST00000625237 ATMINO43313 823 aaPredicted RBP12.34□□□□□ -0.43
LINC01440-207ENST00000625237 ASTLQ6HA08 431 aaPredicted RBP12.34□□□□□ -0.43
LINC01440-207ENST00000625237 LMOD2Q6P5Q4 547 aa12.34□□□□□ -0.43
LINC01440-207ENST00000625237 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.34□□□□□ -0.43
LINC01440-207ENST00000625237 ARIH1Q9Y4X5 557 aaPredicted RBP12.34□□□□□ -0.43
LINC01440-207ENST00000625237 CAMK2BQ13554 666 aa12.32□□□□□ -0.44
LINC01440-207ENST00000625237 GPHNQ9NQX3 736 aaPredicted RBP12.32□□□□□ -0.44
LINC01440-207ENST00000625237 OCEL1Q9H607 264 aa12.31□□□□□ -0.44
LINC01440-207ENST00000625237 PPP1R15BQ5SWA1 713 aa12.3□□□□□ -0.44
LINC01440-207ENST00000625237 MICALL2Q8IY33 904 aa12.3□□□□□ -0.44
LINC01440-207ENST00000625237 PDCD7Q8N8D1 485 aaKnown RBP12.3□□□□□ -0.44
LINC01440-207ENST00000625237 G3V3G9 751 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms