RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 RASEFQ8IZ41 740 aa11.93□□□□□ -0.5
CDKL5-207ENST00000624700 KIF12Q96FN5 646 aa11.92□□□□□ -0.5
CDKL5-207ENST00000624700 ZBTB47Q9UFB7 747 aaPredicted RBP11.92□□□□□ -0.5
CDKL5-207ENST00000624700 ASTLQ6HA08 431 aaPredicted RBP11.9□□□□□ -0.5
CDKL5-207ENST00000624700 PELP1Q8IZL8 1130 aaKnown RBP11.9□□□□□ -0.5
CDKL5-207ENST00000624700 ATMINO43313 823 aaPredicted RBP11.88□□□□□ -0.51
CDKL5-207ENST00000624700 MAP3K13O43283 966 aa11.84□□□□□ -0.51
CDKL5-207ENST00000624700 C7P10643 843 aa11.83□□□□□ -0.52
CDKL5-207ENST00000624700 NUBP1P53384 320 aa11.83□□□□□ -0.52
CDKL5-207ENST00000624700 SLC39A7Q92504 469 aa11.83□□□□□ -0.52
CDKL5-207ENST00000624700 FBXO3Q9UK99 471 aa11.83□□□□□ -0.52
CDKL5-207ENST00000624700 POTEB2H3BUK9 544 aa11.82□□□□□ -0.52
CDKL5-207ENST00000624700 METRNQ9UJH8 293 aa11.81□□□□□ -0.52
CDKL5-207ENST00000624700 OTUD5Q96G74 571 aa11.79□□□□□ -0.52
CDKL5-207ENST00000624700 ATN1P54259 1190 aaPredicted RBP11.78□□□□□ -0.52
CDKL5-207ENST00000624700 FAM212AQ96EL1 285 aa11.77□□□□□ -0.53
CDKL5-207ENST00000624700 BMP2KQ9NSY1 1161 aaPredicted RBP11.77□□□□□ -0.53
CDKL5-207ENST00000624700 TIE1P35590 1138 aa11.76□□□□□ -0.53
CDKL5-207ENST00000624700 SGIP1Q9BQI5 828 aa11.76□□□□□ -0.53
CDKL5-207ENST00000624700 TRPC6Q9Y210 931 aa11.76□□□□□ -0.53
CDKL5-207ENST00000624700 PCDHB13Q9Y5F0 798 aa11.73□□□□□ -0.53
CDKL5-207ENST00000624700 TTLL13PA6NNM8 815 aa11.69□□□□□ -0.54
CDKL5-207ENST00000624700 POTEJP0CG39 1038 aa11.67□□□□□ -0.54
CDKL5-207ENST00000624700 DCAF8Q5TAQ9 597 aa11.67□□□□□ -0.54
CDKL5-207ENST00000624700 MAMSTRQ6ZN01 415 aa11.67□□□□□ -0.54
CDKL5-207ENST00000624700 VASPP50552 380 aaPredicted RBP11.66□□□□□ -0.54
CDKL5-207ENST00000624700 IFNL1Q8IU54 200 aa11.66□□□□□ -0.54
CDKL5-207ENST00000624700 KLHL34Q8N239 644 aa11.63□□□□□ -0.55
CDKL5-207ENST00000624700 POTEFA5A3E0 1075 aa11.62□□□□□ -0.55
CDKL5-207ENST00000624700 TRIM35Q9UPQ4 493 aa11.61□□□□□ -0.55
CDKL5-207ENST00000624700 SEC24BO95487 1268 aa11.6□□□□□ -0.55
CDKL5-207ENST00000624700 IER5LQ5T953 404 aa11.6□□□□□ -0.55
CDKL5-207ENST00000624700 PYGBP11216 843 aa11.59□□□□□ -0.55
CDKL5-207ENST00000624700 SCUBE2Q9NQ36 999 aa11.59□□□□□ -0.55
CDKL5-207ENST00000624700 TMEM106CQ9BVX2 250 aa11.58□□□□□ -0.56
CDKL5-207ENST00000624700 COLQQ9Y215 455 aaPredicted RBP11.57□□□□□ -0.56
CDKL5-207ENST00000624700 GSE1Q14687 1217 aa11.55□□□□□ -0.56
CDKL5-207ENST00000624700 PCDHB8Q9UN66 801 aa11.51□□□□□ -0.57
CDKL5-207ENST00000624700 POTEMA6NI47 508 aa11.46□□□□□ -0.57
CDKL5-207ENST00000624700 CHRM1P11229 460 aaPredicted RBP11.46□□□□□ -0.57
CDKL5-207ENST00000624700 PLCG2P16885 1265 aa11.46□□□□□ -0.57
CDKL5-207ENST00000624700 POTEGQ6S5H5 508 aa11.44□□□□□ -0.58
CDKL5-207ENST00000624700 ZNF467Q7Z7K2 595 aaPredicted RBP11.44□□□□□ -0.58
CDKL5-207ENST00000624700 IFNLR1Q8IU57 520 aaPredicted RBP11.44□□□□□ -0.58
CDKL5-207ENST00000624700 SPOCK2Q92563 424 aa11.44□□□□□ -0.58
CDKL5-207ENST00000624700 IRX5P78411 483 aaPredicted RBP11.43□□□□□ -0.58
CDKL5-207ENST00000624700 AMER1Q5JTC6 1135 aaPredicted RBP11.41□□□□□ -0.58
CDKL5-207ENST00000624700 FAM163AQ96GL9 167 aaPredicted RBP11.41□□□□□ -0.58
CDKL5-207ENST00000624700 OCEL1Q9H607 264 aa11.41□□□□□ -0.58
CDKL5-207ENST00000624700 LCE2DQ5TA82 110 aaPredicted RBP11.36□□□□□ -0.59
CDKL5-207ENST00000624700 PLSCR2Q9NRY7 297 aa11.36□□□□□ -0.59
CDKL5-207ENST00000624700 CIZ1Q9ULV3 898 aaPredicted RBP11.36□□□□□ -0.59
CDKL5-207ENST00000624700 PSEN1P49768 467 aa11.34□□□□□ -0.59
CDKL5-207ENST00000624700 GOLGA2Q08379 1002 aa11.34□□□□□ -0.59
CDKL5-207ENST00000624700 SLAIN1Q8ND83 568 aa11.34□□□□□ -0.59
CDKL5-207ENST00000624700 MKRN3Q13064 507 aaKnown RBP11.31□□□□□ -0.6
CDKL5-207ENST00000624700 PCDH10Q9P2E7 1040 aa11.31□□□□□ -0.6
CDKL5-207ENST00000624700 PDAP1Q13442 181 aaKnown RBP11.3□□□□□ -0.6
CDKL5-207ENST00000624700 PDCD7Q8N8D1 485 aaKnown RBP11.27□□□□□ -0.61
CDKL5-207ENST00000624700 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.25□□□□□ -0.61
CDKL5-207ENST00000624700 TRIM41Q8WV44 630 aa11.24□□□□□ -0.61
CDKL5-207ENST00000624700 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.24□□□□□ -0.61
CDKL5-207ENST00000624700 L3MBTL3Q96JM7 780 aaPredicted RBP11.23□□□□□ -0.61
CDKL5-207ENST00000624700 RTN4Q9NQC3 1192 aaKnown RBP11.23□□□□□ -0.61
CDKL5-207ENST00000624700 ST18O60284 1047 aa11.19□□□□□ -0.62
CDKL5-207ENST00000624700 CABP2Q9NPB3 220 aa11.19□□□□□ -0.62
CDKL5-207ENST00000624700 C3orf67Q6ZVT6 689 aa11.18□□□□□ -0.62
CDKL5-207ENST00000624700 ILDR1Q86SU0 546 aaPredicted RBP11.18□□□□□ -0.62
CDKL5-207ENST00000624700 SNPHO15079 494 aa11.17□□□□□ -0.62
CDKL5-207ENST00000624700 DPY19L2Q6NUT2 758 aa11.11□□□□□ -0.63
CDKL5-207ENST00000624700 TMEM121BQ9BXQ6 578 aaPredicted RBP11.11□□□□□ -0.63
CDKL5-207ENST00000624700 CDAN1Q8IWY9 1227 aa11.1□□□□□ -0.63
CDKL5-207ENST00000624700 G3V3G9 751 aa11.08□□□□□ -0.64
CDKL5-207ENST00000624700 RIOK3O14730 519 aaKnown RBP11.07□□□□□ -0.64
CDKL5-207ENST00000624700 BOLA1Q9Y3E2 137 aa11.07□□□□□ -0.64
CDKL5-207ENST00000624700 EFCAB3Q8N7B9 438 aa11.06□□□□□ -0.64
CDKL5-207ENST00000624700 RNF25Q96BH1 459 aaPredicted RBP11.04□□□□□ -0.64
CDKL5-207ENST00000624700 VGFO15240 615 aaPredicted RBP11.02□□□□□ -0.65
CDKL5-207ENST00000624700 MARVELD3Q96A59 401 aa11.01□□□□□ -0.65
CDKL5-207ENST00000624700 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11□□□□□ -0.65
CDKL5-207ENST00000624700 ZFP91Q96JP5 570 aaPredicted RBP11□□□□□ -0.65
CDKL5-207ENST00000624700 SOX12O15370 315 aa10.98□□□□□ -0.65
CDKL5-207ENST00000624700 EMP3P54852 163 aa10.94□□□□□ -0.66
CDKL5-207ENST00000624700 TAOK2Q9UL54 1235 aa10.94□□□□□ -0.66
CDKL5-207ENST00000624700 HOXB3P14651 431 aaPredicted RBP10.91□□□□□ -0.66
CDKL5-207ENST00000624700 MICALL2Q8IY33 904 aa10.91□□□□□ -0.66
CDKL5-207ENST00000624700 MS4A4AQ96JQ5 239 aa10.9□□□□□ -0.66
CDKL5-207ENST00000624700 PHF8Q9UPP1 1060 aa10.9□□□□□ -0.66
CDKL5-207ENST00000624700 DOK7Q18PE1 504 aa10.88□□□□□ -0.67
CDKL5-207ENST00000624700 BCL11BQ9C0K0 894 aaPredicted RBP10.88□□□□□ -0.67
CDKL5-207ENST00000624700 PKD2Q13563 968 aa10.87□□□□□ -0.67
CDKL5-207ENST00000624700 ZNF710Q8N1W2 664 aa10.87□□□□□ -0.67
CDKL5-207ENST00000624700 FAM205CA6NFA0 338 aa10.86□□□□□ -0.67
CDKL5-207ENST00000624700 ECM2O94769 699 aaPredicted RBP10.86□□□□□ -0.67
CDKL5-207ENST00000624700 NLRP6P59044 892 aa10.86□□□□□ -0.67
CDKL5-207ENST00000624700 HS3ST6Q96QI5 342 aa10.85□□□□□ -0.67
CDKL5-207ENST00000624700 POTEB3A0JP26 581 aa10.84□□□□□ -0.67
CDKL5-207ENST00000624700 POTEBQ6S5H4 581 aa10.84□□□□□ -0.67
CDKL5-207ENST00000624700 STK24Q9Y6E0 443 aa10.84□□□□□ -0.67
CDKL5-207ENST00000624700 HOXB1P14653 301 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms