RNA–Protein interactions for RNA: ENST00000622580.4

TNNI1-207, Transcript of troponin I1, slow skeletal type, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNNI1, Length 6,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI1-207ENST00000622580 FAM9BQ8IZU0 186 aa17.54■□□□□ 0.4
TNNI1-207ENST00000622580 HDGFP51858 240 aaKnown RBP17.52■□□□□ 0.4
TNNI1-207ENST00000622580 CFAP53Q96M91 514 aa17.52■□□□□ 0.4
TNNI1-207ENST00000622580 POGKQ9P215 609 aa17.51■□□□□ 0.39
TNNI1-207ENST00000622580 ACIN1Q9UKV3 1341 aaKnown RBP17.5■□□□□ 0.39
TNNI1-207ENST00000622580 PPM1GO15355 546 aaPredicted RBP17.49■□□□□ 0.39
TNNI1-207ENST00000622580 GOLGA2Q08379 1002 aa17.46■□□□□ 0.39
TNNI1-207ENST00000622580 RB1CC1Q8TDY2 1594 aa17.46■□□□□ 0.39
TNNI1-207ENST00000622580 MLECQ14165 292 aa17.46■□□□□ 0.39
TNNI1-207ENST00000622580 EIF4G2P78344 907 aaKnown RBP eCLIP17.45■□□□□ 0.38
TNNI1-207ENST00000622580 RSF1Q96T23 1441 aaPredicted RBP17.45■□□□□ 0.38
TNNI1-207ENST00000622580 AEBP2Q6ZN18 517 aaPredicted RBP17.44■□□□□ 0.38
TNNI1-207ENST00000622580 CDCA8Q53HL2 280 aa17.44■□□□□ 0.38
TNNI1-207ENST00000622580 HNRNPUQ00839 825 aaKnown RBP eCLIP17.43■□□□□ 0.38
TNNI1-207ENST00000622580 EIF5BO60841 1220 aaKnown RBP17.42■□□□□ 0.38
TNNI1-207ENST00000622580 RGL3Q3MIN7 710 aa17.4■□□□□ 0.38
TNNI1-207ENST00000622580 GLIPR1L2Q4G1C9 344 aa17.4■□□□□ 0.38
TNNI1-207ENST00000622580 NCLP19338 710 aaKnown RBP17.39■□□□□ 0.37
TNNI1-207ENST00000622580 TMX4Q9H1E5 349 aaPredicted RBP17.38■□□□□ 0.37
TNNI1-207ENST00000622580 RRP7BPQ9NSQ0 103 aa17.38■□□□□ 0.37
TNNI1-207ENST00000622580 CFDP1Q9UEE9 299 aaPredicted RBP17.38■□□□□ 0.37
TNNI1-207ENST00000622580 ZRSR1Q15695 479 aaKnown RBP17.37■□□□□ 0.37
TNNI1-207ENST00000622580 CASC1Q6TDU7 716 aa17.36■□□□□ 0.37
TNNI1-207ENST00000622580 MAPK8IP3Q9UPT6 1336 aa17.36■□□□□ 0.37
TNNI1-207ENST00000622580 KANK1Q14678 1352 aa17.35■□□□□ 0.37
TNNI1-207ENST00000622580 CCDC9Q9Y3X0 531 aaKnown RBP17.35■□□□□ 0.37
TNNI1-207ENST00000622580 NUDCQ9Y266 331 aa17.33■□□□□ 0.37
TNNI1-207ENST00000622580 LAS1LQ9Y4W2 734 aaKnown RBP17.33■□□□□ 0.36
TNNI1-207ENST00000622580 DDX10Q13206 875 aaKnown RBP17.32■□□□□ 0.36
TNNI1-207ENST00000622580 MRS2Q9HD23 443 aa17.32■□□□□ 0.36
TNNI1-207ENST00000622580 KNSTRNQ9Y448 316 aa17.31■□□□□ 0.36
TNNI1-207ENST00000622580 OS9Q13438 667 aaPredicted RBP17.3■□□□□ 0.36
TNNI1-207ENST00000622580 FKBP8Q14318 412 aa17.3■□□□□ 0.36
TNNI1-207ENST00000622580 CCDC136Q96JN2 1154 aa17.3■□□□□ 0.36
TNNI1-207ENST00000622580 CLSTN1O94985 981 aa17.28■□□□□ 0.36
TNNI1-207ENST00000622580 ISY1Q9ULR0 285 aaKnown RBP17.28■□□□□ 0.36
TNNI1-207ENST00000622580 PNNQ9H307 717 aaKnown RBP17.25■□□□□ 0.35
TNNI1-207ENST00000622580 NCBP3Q53F19 620 aaKnown RBP17.25■□□□□ 0.35
TNNI1-207ENST00000622580 CSB-PGBD3P0DP91 1061 aa17.24■□□□□ 0.35
TNNI1-207ENST00000622580 FTSJ3Q8IY81 847 aaKnown RBP17.24■□□□□ 0.35
TNNI1-207ENST00000622580 BAZ1BQ9UIG0 1483 aaKnown RBP17.24■□□□□ 0.35
TNNI1-207ENST00000622580 TAOK2Q9UL54 1235 aa17.23■□□□□ 0.35
TNNI1-207ENST00000622580 SOX12O15370 315 aa17.2■□□□□ 0.34
TNNI1-207ENST00000622580 FGD1P98174 961 aa17.19■□□□□ 0.34
TNNI1-207ENST00000622580 ZCCHC6Q5VYS8 1495 aaKnown RBP17.17■□□□□ 0.34
TNNI1-207ENST00000622580 PAK3O75914 559 aaPredicted RBP17.17■□□□□ 0.34
TNNI1-207ENST00000622580 CHMP4BQ9H444 224 aaKnown RBP17.17■□□□□ 0.34
TNNI1-207ENST00000622580 GOLGA6L22H0YM25 854 aa17.16■□□□□ 0.34
TNNI1-207ENST00000622580 CARD11Q9BXL7 1154 aa17.16■□□□□ 0.34
TNNI1-207ENST00000622580 G3V3G9 751 aa17.15■□□□□ 0.34
TNNI1-207ENST00000622580 SRPK2P78362 688 aaKnown RBP17.15■□□□□ 0.34
TNNI1-207ENST00000622580 DCAF8Q5TAQ9 597 aa17.15■□□□□ 0.34
TNNI1-207ENST00000622580 NAP1L2Q9ULW6 460 aaPredicted RBP17.15■□□□□ 0.34
TNNI1-207ENST00000622580 CLIP1P30622 1438 aa17.15■□□□□ 0.34
TNNI1-207ENST00000622580 BECN1Q14457 450 aa17.15■□□□□ 0.34
TNNI1-207ENST00000622580 EIF4G1Q04637 1599 aaKnown RBP17.15■□□□□ 0.34
TNNI1-207ENST00000622580 U2SURPO15042 1029 aaKnown RBP17.14■□□□□ 0.34
TNNI1-207ENST00000622580 KCNJ4P48050 445 aa17.13■□□□□ 0.33
TNNI1-207ENST00000622580 NEUROD2Q15784 382 aa17.13■□□□□ 0.33
TNNI1-207ENST00000622580 NBR1Q14596 966 aa17.13■□□□□ 0.33
TNNI1-207ENST00000622580 TNNT2P45379 298 aaPredicted RBP17.12■□□□□ 0.33
TNNI1-207ENST00000622580 CCNB3Q8WWL7 1395 aa17.12■□□□□ 0.33
TNNI1-207ENST00000622580 RTF1Q92541 710 aaKnown RBP17.12■□□□□ 0.33
TNNI1-207ENST00000622580 GGT6Q6P531 493 aa17.11■□□□□ 0.33
TNNI1-207ENST00000622580 KIF27Q86VH2 1401 aa17.11■□□□□ 0.33
TNNI1-207ENST00000622580 DCAF8L1A6NGE4 600 aa17.11■□□□□ 0.33
TNNI1-207ENST00000622580 ZNF330Q9Y3S2 320 aaPredicted RBP17.1■□□□□ 0.33
TNNI1-207ENST00000622580 EID1Q9Y6B2 187 aa17.09■□□□□ 0.33
TNNI1-207ENST00000622580 MEX3CQ5U5Q3 659 aaKnown RBP17.08■□□□□ 0.32
TNNI1-207ENST00000622580 TPRNQ4KMQ1 711 aa17.08■□□□□ 0.32
TNNI1-207ENST00000622580 HDGFL2Q7Z4V5 671 aaPredicted RBP17.05■□□□□ 0.32
TNNI1-207ENST00000622580 MS4A1P11836 297 aa17.05■□□□□ 0.32
TNNI1-207ENST00000622580 CCDC180Q9P1Z9 1646 aa17.04■□□□□ 0.32
TNNI1-207ENST00000622580 SAFB2Q14151 953 aaKnown RBP eCLIP17.04■□□□□ 0.32
TNNI1-207ENST00000622580 GOLGA6L6A8MZA4 724 aa17.03■□□□□ 0.32
TNNI1-207ENST00000622580 STK26Q9P289 416 aa17.03■□□□□ 0.32
TNNI1-207ENST00000622580 CARMIL2Q6F5E8 1435 aa17.02■□□□□ 0.31
TNNI1-207ENST00000622580 DDRGK1Q96HY6 314 aa17.01■□□□□ 0.31
TNNI1-207ENST00000622580 GOLGA3Q08378 1498 aa17.01■□□□□ 0.31
TNNI1-207ENST00000622580 HIRIP3Q9BW71 556 aaPredicted RBP17■□□□□ 0.31
TNNI1-207ENST00000622580 PHF23Q9BUL5 403 aaPredicted RBP17■□□□□ 0.31
TNNI1-207ENST00000622580 TMF1P82094 1093 aa16.99■□□□□ 0.31
TNNI1-207ENST00000622580 PTMAP06454 111 aaKnown RBP16.99■□□□□ 0.31
TNNI1-207ENST00000622580 NACADO15069 1562 aa16.98■□□□□ 0.31
TNNI1-207ENST00000622580 ANP32EQ9BTT0 268 aa16.98■□□□□ 0.31
TNNI1-207ENST00000622580 MSH5O43196 834 aa16.97■□□□□ 0.31
TNNI1-207ENST00000622580 FRAT1Q92837 279 aaPredicted RBP16.96■□□□□ 0.31
TNNI1-207ENST00000622580 EEA1Q15075 1411 aa16.96■□□□□ 0.31
TNNI1-207ENST00000622580 WRNQ14191 1432 aaPredicted RBP eCLIP16.96■□□□□ 0.3
TNNI1-207ENST00000622580 GNL2Q13823 731 aaKnown RBP16.95■□□□□ 0.3
TNNI1-207ENST00000622580 CC2D1BQ5T0F9 858 aaKnown RBP16.95■□□□□ 0.3
TNNI1-207ENST00000622580 MORC1Q86VD1 984 aa16.95■□□□□ 0.3
TNNI1-207ENST00000622580 TRIM44Q96DX7 344 aaPredicted RBP16.95■□□□□ 0.3
TNNI1-207ENST00000622580 PRM3Q9NNZ6 103 aa16.95■□□□□ 0.3
TNNI1-207ENST00000622580 KRI1Q8N9T8 703 aaKnown RBP16.94■□□□□ 0.3
TNNI1-207ENST00000622580 TAF7LQ5H9L4 462 aa16.94■□□□□ 0.3
TNNI1-207ENST00000622580 DCAF1Q9Y4B6 1507 aa16.93■□□□□ 0.3
TNNI1-207ENST00000622580 GTF2E1P29083 439 aaPredicted RBP16.92■□□□□ 0.3
TNNI1-207ENST00000622580 CHMP4AQ9BY43 222 aa16.92■□□□□ 0.3
TNNI1-207ENST00000622580 MCCP23508 829 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms