RNA–Protein interactions for RNA: ENST00000621371.4

PDE4DIP-250, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 3

Gene PDE4DIP, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-250ENST00000621371 PHF12Q96QT6 1004 aa10.2□□□□□ -0.78
PDE4DIP-250ENST00000621371 TSPYL2Q9H2G4 693 aaPredicted RBP10.19□□□□□ -0.78
PDE4DIP-250ENST00000621371 IFNLR1Q8IU57 520 aaPredicted RBP10.18□□□□□ -0.78
PDE4DIP-250ENST00000621371 GALR2O43603 387 aaPredicted RBP10.13□□□□□ -0.79
PDE4DIP-250ENST00000621371 KLHL34Q8N239 644 aa10.12□□□□□ -0.79
PDE4DIP-250ENST00000621371 FAM212AQ96EL1 285 aa10.12□□□□□ -0.79
PDE4DIP-250ENST00000621371 KIF12Q96FN5 646 aa10.11□□□□□ -0.79
PDE4DIP-250ENST00000621371 POTEIP0CG38 1075 aa10.09□□□□□ -0.79
PDE4DIP-250ENST00000621371 MS4A3Q96HJ5 214 aa10.09□□□□□ -0.79
PDE4DIP-250ENST00000621371 SPOCK2Q92563 424 aa10.07□□□□□ -0.8
PDE4DIP-250ENST00000621371 MAP3K13O43283 966 aa10.04□□□□□ -0.8
PDE4DIP-250ENST00000621371 GSE1Q14687 1217 aa10.02□□□□□ -0.81
PDE4DIP-250ENST00000621371 DCAF8Q5TAQ9 597 aa10.02□□□□□ -0.81
PDE4DIP-250ENST00000621371 SGIP1Q9BQI5 828 aa10.02□□□□□ -0.81
PDE4DIP-250ENST00000621371 DCBLD2Q96PD2 775 aa10□□□□□ -0.81
PDE4DIP-250ENST00000621371 ASTLQ6HA08 431 aaPredicted RBP9.98□□□□□ -0.81
PDE4DIP-250ENST00000621371 TRPC6Q9Y210 931 aa9.97□□□□□ -0.81
PDE4DIP-250ENST00000621371 PCDHB13Q9Y5F0 798 aa9.97□□□□□ -0.81
PDE4DIP-250ENST00000621371 PYGBP11216 843 aa9.96□□□□□ -0.82
PDE4DIP-250ENST00000621371 CHRM1P11229 460 aaPredicted RBP9.95□□□□□ -0.82
PDE4DIP-250ENST00000621371 IFNL1Q8IU54 200 aa9.95□□□□□ -0.82
PDE4DIP-250ENST00000621371 ATMINO43313 823 aaPredicted RBP9.94□□□□□ -0.82
PDE4DIP-250ENST00000621371 TIE1P35590 1138 aa9.93□□□□□ -0.82
PDE4DIP-250ENST00000621371 BMP2KQ9NSY1 1161 aaPredicted RBP9.93□□□□□ -0.82
PDE4DIP-250ENST00000621371 PELP1Q8IZL8 1130 aaKnown RBP9.91□□□□□ -0.82
PDE4DIP-250ENST00000621371 PCDH10Q9P2E7 1040 aa9.91□□□□□ -0.82
PDE4DIP-250ENST00000621371 CIZ1Q9ULV3 898 aaPredicted RBP9.9□□□□□ -0.82
PDE4DIP-250ENST00000621371 ATN1P54259 1190 aaPredicted RBP9.89□□□□□ -0.83
PDE4DIP-250ENST00000621371 TTLL13PA6NNM8 815 aa9.88□□□□□ -0.83
PDE4DIP-250ENST00000621371 POTEMA6NI47 508 aa9.87□□□□□ -0.83
PDE4DIP-250ENST00000621371 TRIM41Q8WV44 630 aa9.87□□□□□ -0.83
PDE4DIP-250ENST00000621371 PCDHB8Q9UN66 801 aa9.86□□□□□ -0.83
PDE4DIP-250ENST00000621371 ZNF467Q7Z7K2 595 aaPredicted RBP9.85□□□□□ -0.83
PDE4DIP-250ENST00000621371 SLC39A7Q92504 469 aa9.83□□□□□ -0.84
PDE4DIP-250ENST00000621371 POTEGQ6S5H5 508 aa9.81□□□□□ -0.84
PDE4DIP-250ENST00000621371 TMEM106CQ9BVX2 250 aa9.81□□□□□ -0.84
PDE4DIP-250ENST00000621371 METRNQ9UJH8 293 aa9.81□□□□□ -0.84
PDE4DIP-250ENST00000621371 C7P10643 843 aa9.8□□□□□ -0.84
PDE4DIP-250ENST00000621371 TRIM35Q9UPQ4 493 aa9.8□□□□□ -0.84
PDE4DIP-250ENST00000621371 POTEFA5A3E0 1075 aa9.77□□□□□ -0.85
PDE4DIP-250ENST00000621371 RNF25Q96BH1 459 aaPredicted RBP9.77□□□□□ -0.85
PDE4DIP-250ENST00000621371 PKD2Q13563 968 aa9.76□□□□□ -0.85
PDE4DIP-250ENST00000621371 IER5LQ5T953 404 aa9.76□□□□□ -0.85
PDE4DIP-250ENST00000621371 OTUD5Q96G74 571 aa9.76□□□□□ -0.85
PDE4DIP-250ENST00000621371 POTEB2H3BUK9 544 aa9.75□□□□□ -0.85
PDE4DIP-250ENST00000621371 PSEN1P49768 467 aa9.75□□□□□ -0.85
PDE4DIP-250ENST00000621371 PDAP1Q13442 181 aaKnown RBP9.75□□□□□ -0.85
PDE4DIP-250ENST00000621371 RIOK3O14730 519 aaKnown RBP9.71□□□□□ -0.86
PDE4DIP-250ENST00000621371 COLQQ9Y215 455 aaPredicted RBP9.7□□□□□ -0.86
PDE4DIP-250ENST00000621371 POTEJP0CG39 1038 aa9.69□□□□□ -0.86
PDE4DIP-250ENST00000621371 IRX5P78411 483 aaPredicted RBP9.69□□□□□ -0.86
PDE4DIP-250ENST00000621371 ECM2O94769 699 aaPredicted RBP9.68□□□□□ -0.86
PDE4DIP-250ENST00000621371 VGFO15240 615 aaPredicted RBP9.65□□□□□ -0.86
PDE4DIP-250ENST00000621371 ILDR1Q86SU0 546 aaPredicted RBP9.64□□□□□ -0.87
PDE4DIP-250ENST00000621371 RGL2O15211 777 aa9.63□□□□□ -0.87
PDE4DIP-250ENST00000621371 SEC24BO95487 1268 aa9.63□□□□□ -0.87
PDE4DIP-250ENST00000621371 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.62□□□□□ -0.87
PDE4DIP-250ENST00000621371 ZFP91Q96JP5 570 aaPredicted RBP9.62□□□□□ -0.87
PDE4DIP-250ENST00000621371 CABP2Q9NPB3 220 aa9.62□□□□□ -0.87
PDE4DIP-250ENST00000621371 PLCG2P16885 1265 aa9.61□□□□□ -0.87
PDE4DIP-250ENST00000621371 PDCD7Q8N8D1 485 aaKnown RBP9.61□□□□□ -0.87
PDE4DIP-250ENST00000621371 OCEL1Q9H607 264 aa9.61□□□□□ -0.87
PDE4DIP-250ENST00000621371 GOLGA2Q08379 1002 aa9.6□□□□□ -0.87
PDE4DIP-250ENST00000621371 MKRN3Q13064 507 aaKnown RBP9.6□□□□□ -0.87
PDE4DIP-250ENST00000621371 MAMSTRQ6ZN01 415 aa9.6□□□□□ -0.87
PDE4DIP-250ENST00000621371 TAOK2Q9UL54 1235 aa9.57□□□□□ -0.88
PDE4DIP-250ENST00000621371 EFCAB3Q8N7B9 438 aa9.55□□□□□ -0.88
PDE4DIP-250ENST00000621371 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.55□□□□□ -0.88
PDE4DIP-250ENST00000621371 BCL11BQ9C0K0 894 aaPredicted RBP9.53□□□□□ -0.88
PDE4DIP-250ENST00000621371 SCUBE2Q9NQ36 999 aa9.53□□□□□ -0.88
PDE4DIP-250ENST00000621371 STK25O00506 426 aa9.5□□□□□ -0.89
PDE4DIP-250ENST00000621371 FAM163AQ96GL9 167 aaPredicted RBP9.5□□□□□ -0.89
PDE4DIP-250ENST00000621371 SOX12O15370 315 aa9.49□□□□□ -0.89
PDE4DIP-250ENST00000621371 STK24Q9Y6E0 443 aa9.49□□□□□ -0.89
PDE4DIP-250ENST00000621371 DPY19L2Q6NUT2 758 aa9.47□□□□□ -0.89
PDE4DIP-250ENST00000621371 MS4A4AQ96JQ5 239 aa9.47□□□□□ -0.89
PDE4DIP-250ENST00000621371 L3MBTL3Q96JM7 780 aaPredicted RBP9.46□□□□□ -0.9
PDE4DIP-250ENST00000621371 PHF8Q9UPP1 1060 aa9.46□□□□□ -0.9
PDE4DIP-250ENST00000621371 HS6ST3Q8IZP7 471 aa9.45□□□□□ -0.9
PDE4DIP-250ENST00000621371 FBXO22Q8NEZ5 403 aa9.45□□□□□ -0.9
PDE4DIP-250ENST00000621371 MFRPQ9BY79 579 aa9.44□□□□□ -0.9
PDE4DIP-250ENST00000621371 TMEM121BQ9BXQ6 578 aaPredicted RBP9.42□□□□□ -0.9
PDE4DIP-250ENST00000621371 NLRP6P59044 892 aa9.41□□□□□ -0.9
PDE4DIP-250ENST00000621371 DNAJC5Q9H3Z4 198 aa9.41□□□□□ -0.9
PDE4DIP-250ENST00000621371 BOLA1Q9Y3E2 137 aa9.41□□□□□ -0.9
PDE4DIP-250ENST00000621371 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.4□□□□□ -0.9
PDE4DIP-250ENST00000621371 SLAIN1Q8ND83 568 aa9.39□□□□□ -0.91
PDE4DIP-250ENST00000621371 AMER1Q5JTC6 1135 aaPredicted RBP9.38□□□□□ -0.91
PDE4DIP-250ENST00000621371 C3orf67Q6ZVT6 689 aa9.38□□□□□ -0.91
PDE4DIP-250ENST00000621371 MICALL2Q8IY33 904 aa9.37□□□□□ -0.91
PDE4DIP-250ENST00000621371 CHGAP10645 457 aaKnown RBP9.36□□□□□ -0.91
PDE4DIP-250ENST00000621371 LCE2DQ5TA82 110 aaPredicted RBP9.35□□□□□ -0.91
PDE4DIP-250ENST00000621371 CDAN1Q8IWY9 1227 aa9.35□□□□□ -0.91
PDE4DIP-250ENST00000621371 RTN4Q9NQC3 1192 aaKnown RBP9.34□□□□□ -0.91
PDE4DIP-250ENST00000621371 G3V3G9 751 aa9.33□□□□□ -0.92
PDE4DIP-250ENST00000621371 NKX1-1Q15270 411 aaPredicted RBP9.33□□□□□ -0.92
PDE4DIP-250ENST00000621371 TMEM92Q6UXU6 159 aa9.29□□□□□ -0.92
PDE4DIP-250ENST00000621371 PPP1R37O75864 691 aa9.27□□□□□ -0.93
PDE4DIP-250ENST00000621371 SNPHO15079 494 aa9.24□□□□□ -0.93
PDE4DIP-250ENST00000621371 ST18O60284 1047 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms