RNA–Protein interactions for RNA: ENST00000620759.1

CDKN3-212, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 196 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-212ENST00000620759 CCDC61Q9Y6R9 512 aa11.47□□□□□ -0.57
CDKN3-212ENST00000620759 FBXO3Q9UK99 471 aa11.44□□□□□ -0.58
CDKN3-212ENST00000620759 RASEFQ8IZ41 740 aa11.42□□□□□ -0.58
CDKN3-212ENST00000620759 KIF12Q96FN5 646 aa11.41□□□□□ -0.58
CDKN3-212ENST00000620759 ASTLQ6HA08 431 aaPredicted RBP11.4□□□□□ -0.58
CDKN3-212ENST00000620759 ATMINO43313 823 aaPredicted RBP11.36□□□□□ -0.59
CDKN3-212ENST00000620759 SLC39A7Q92504 469 aa11.35□□□□□ -0.59
CDKN3-212ENST00000620759 MAP3K13O43283 966 aa11.34□□□□□ -0.59
CDKN3-212ENST00000620759 C7P10643 843 aa11.34□□□□□ -0.59
CDKN3-212ENST00000620759 PELP1Q8IZL8 1130 aaKnown RBP11.34□□□□□ -0.59
CDKN3-212ENST00000620759 FAM212AQ96EL1 285 aa11.34□□□□□ -0.59
CDKN3-212ENST00000620759 NUBP1P53384 320 aa11.33□□□□□ -0.6
CDKN3-212ENST00000620759 METRNQ9UJH8 293 aa11.33□□□□□ -0.6
CDKN3-212ENST00000620759 SGIP1Q9BQI5 828 aa11.31□□□□□ -0.6
CDKN3-212ENST00000620759 TIE1P35590 1138 aa11.29□□□□□ -0.6
CDKN3-212ENST00000620759 ATN1P54259 1190 aaPredicted RBP11.27□□□□□ -0.61
CDKN3-212ENST00000620759 BMP2KQ9NSY1 1161 aaPredicted RBP11.27□□□□□ -0.61
CDKN3-212ENST00000620759 PCDHB13Q9Y5F0 798 aa11.27□□□□□ -0.61
CDKN3-212ENST00000620759 POTEB2H3BUK9 544 aa11.25□□□□□ -0.61
CDKN3-212ENST00000620759 OTUD5Q96G74 571 aa11.24□□□□□ -0.61
CDKN3-212ENST00000620759 VASPP50552 380 aaPredicted RBP11.23□□□□□ -0.61
CDKN3-212ENST00000620759 TRPC6Q9Y210 931 aa11.23□□□□□ -0.61
CDKN3-212ENST00000620759 DCAF8Q5TAQ9 597 aa11.22□□□□□ -0.61
CDKN3-212ENST00000620759 MAMSTRQ6ZN01 415 aa11.21□□□□□ -0.61
CDKN3-212ENST00000620759 KLHL34Q8N239 644 aa11.21□□□□□ -0.61
CDKN3-212ENST00000620759 TTLL13PA6NNM8 815 aa11.2□□□□□ -0.62
CDKN3-212ENST00000620759 IFNL1Q8IU54 200 aa11.17□□□□□ -0.62
CDKN3-212ENST00000620759 SEC24BO95487 1268 aa11.15□□□□□ -0.62
CDKN3-212ENST00000620759 SCUBE2Q9NQ36 999 aa11.15□□□□□ -0.62
CDKN3-212ENST00000620759 GSE1Q14687 1217 aa11.14□□□□□ -0.63
CDKN3-212ENST00000620759 TRIM35Q9UPQ4 493 aa11.14□□□□□ -0.63
CDKN3-212ENST00000620759 IER5LQ5T953 404 aa11.13□□□□□ -0.63
CDKN3-212ENST00000620759 PYGBP11216 843 aa11.12□□□□□ -0.63
CDKN3-212ENST00000620759 TMEM106CQ9BVX2 250 aa11.12□□□□□ -0.63
CDKN3-212ENST00000620759 POTEJP0CG39 1038 aa11.09□□□□□ -0.63
CDKN3-212ENST00000620759 POTEFA5A3E0 1075 aa11.07□□□□□ -0.64
CDKN3-212ENST00000620759 COLQQ9Y215 455 aaPredicted RBP11.05□□□□□ -0.64
CDKN3-212ENST00000620759 PLCG2P16885 1265 aa11.03□□□□□ -0.64
CDKN3-212ENST00000620759 ZNF467Q7Z7K2 595 aaPredicted RBP11.03□□□□□ -0.64
CDKN3-212ENST00000620759 SPOCK2Q92563 424 aa11.02□□□□□ -0.65
CDKN3-212ENST00000620759 PCDHB8Q9UN66 801 aa11.02□□□□□ -0.65
CDKN3-212ENST00000620759 CHRM1P11229 460 aaPredicted RBP11□□□□□ -0.65
CDKN3-212ENST00000620759 IFNLR1Q8IU57 520 aaPredicted RBP10.97□□□□□ -0.65
CDKN3-212ENST00000620759 POTEMA6NI47 508 aa10.95□□□□□ -0.66
CDKN3-212ENST00000620759 IRX5P78411 483 aaPredicted RBP10.95□□□□□ -0.66
CDKN3-212ENST00000620759 CIZ1Q9ULV3 898 aaPredicted RBP10.95□□□□□ -0.66
CDKN3-212ENST00000620759 GOLGA2Q08379 1002 aa10.94□□□□□ -0.66
CDKN3-212ENST00000620759 OCEL1Q9H607 264 aa10.94□□□□□ -0.66
CDKN3-212ENST00000620759 POTEGQ6S5H5 508 aa10.92□□□□□ -0.66
CDKN3-212ENST00000620759 FAM163AQ96GL9 167 aaPredicted RBP10.91□□□□□ -0.66
CDKN3-212ENST00000620759 MKRN3Q13064 507 aaKnown RBP10.9□□□□□ -0.66
CDKN3-212ENST00000620759 PSEN1P49768 467 aa10.89□□□□□ -0.67
CDKN3-212ENST00000620759 SLAIN1Q8ND83 568 aa10.88□□□□□ -0.67
CDKN3-212ENST00000620759 PDAP1Q13442 181 aaKnown RBP10.87□□□□□ -0.67
CDKN3-212ENST00000620759 TRIM41Q8WV44 630 aa10.86□□□□□ -0.67
CDKN3-212ENST00000620759 PLSCR2Q9NRY7 297 aa10.85□□□□□ -0.67
CDKN3-212ENST00000620759 PCDH10Q9P2E7 1040 aa10.85□□□□□ -0.67
CDKN3-212ENST00000620759 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.82□□□□□ -0.68
CDKN3-212ENST00000620759 LCE2DQ5TA82 110 aaPredicted RBP10.8□□□□□ -0.68
CDKN3-212ENST00000620759 L3MBTL3Q96JM7 780 aaPredicted RBP10.8□□□□□ -0.68
CDKN3-212ENST00000620759 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.8□□□□□ -0.68
CDKN3-212ENST00000620759 PDCD7Q8N8D1 485 aaKnown RBP10.79□□□□□ -0.68
CDKN3-212ENST00000620759 C3orf67Q6ZVT6 689 aa10.77□□□□□ -0.69
CDKN3-212ENST00000620759 CABP2Q9NPB3 220 aa10.76□□□□□ -0.69
CDKN3-212ENST00000620759 SNPHO15079 494 aa10.75□□□□□ -0.69
CDKN3-212ENST00000620759 G3V3G9 751 aa10.71□□□□□ -0.69
CDKN3-212ENST00000620759 ST18O60284 1047 aa10.7□□□□□ -0.7
CDKN3-212ENST00000620759 ILDR1Q86SU0 546 aaPredicted RBP10.7□□□□□ -0.7
CDKN3-212ENST00000620759 TMEM121BQ9BXQ6 578 aaPredicted RBP10.68□□□□□ -0.7
CDKN3-212ENST00000620759 RIOK3O14730 519 aaKnown RBP10.66□□□□□ -0.7
CDKN3-212ENST00000620759 BOLA1Q9Y3E2 137 aa10.65□□□□□ -0.7
CDKN3-212ENST00000620759 VGFO15240 615 aaPredicted RBP10.62□□□□□ -0.71
CDKN3-212ENST00000620759 CDAN1Q8IWY9 1227 aa10.62□□□□□ -0.71
CDKN3-212ENST00000620759 TAOK2Q9UL54 1235 aa10.62□□□□□ -0.71
CDKN3-212ENST00000620759 DPY19L2Q6NUT2 758 aa10.61□□□□□ -0.71
CDKN3-212ENST00000620759 EFCAB3Q8N7B9 438 aa10.61□□□□□ -0.71
CDKN3-212ENST00000620759 RNF25Q96BH1 459 aaPredicted RBP10.58□□□□□ -0.72
CDKN3-212ENST00000620759 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.57□□□□□ -0.72
CDKN3-212ENST00000620759 SOX12O15370 315 aa10.57□□□□□ -0.72
CDKN3-212ENST00000620759 ZFP91Q96JP5 570 aaPredicted RBP10.57□□□□□ -0.72
CDKN3-212ENST00000620759 MARVELD3Q96A59 401 aa10.53□□□□□ -0.72
CDKN3-212ENST00000620759 EMP3P54852 163 aa10.51□□□□□ -0.73
CDKN3-212ENST00000620759 ECM2O94769 699 aaPredicted RBP10.49□□□□□ -0.73
CDKN3-212ENST00000620759 MICALL2Q8IY33 904 aa10.47□□□□□ -0.73
CDKN3-212ENST00000620759 ZNF710Q8N1W2 664 aa10.47□□□□□ -0.73
CDKN3-212ENST00000620759 BCL11BQ9C0K0 894 aaPredicted RBP10.47□□□□□ -0.73
CDKN3-212ENST00000620759 DOK7Q18PE1 504 aa10.46□□□□□ -0.73
CDKN3-212ENST00000620759 PHF8Q9UPP1 1060 aa10.46□□□□□ -0.73
CDKN3-212ENST00000620759 RIMBP2O15034 1052 aa10.45□□□□□ -0.74
CDKN3-212ENST00000620759 NLRP6P59044 892 aa10.45□□□□□ -0.74
CDKN3-212ENST00000620759 STK24Q9Y6E0 443 aa10.45□□□□□ -0.74
CDKN3-212ENST00000620759 STK25O00506 426 aa10.43□□□□□ -0.74
CDKN3-212ENST00000620759 MS4A4AQ96JQ5 239 aa10.43□□□□□ -0.74
CDKN3-212ENST00000620759 HOXB3P14651 431 aaPredicted RBP10.42□□□□□ -0.74
CDKN3-212ENST00000620759 FAM205CA6NFA0 338 aa10.41□□□□□ -0.74
CDKN3-212ENST00000620759 HS3ST6Q96QI5 342 aa10.4□□□□□ -0.74
CDKN3-212ENST00000620759 HOXB1P14653 301 aaPredicted RBP10.38□□□□□ -0.75
CDKN3-212ENST00000620759 PKD2Q13563 968 aa10.37□□□□□ -0.75
CDKN3-212ENST00000620759 FBXO22Q8NEZ5 403 aa10.36□□□□□ -0.75
CDKN3-212ENST00000620759 ZSWIM6Q9HCJ5 1215 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms