RNA–Protein interactions for RNA: ENST00000620364.4

COL19A1-205, Transcript of collagen type XIX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL19A1, Length 6,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL19A1-205ENST00000620364 MYH16Q9H6N6 1097 aa16.52■□□□□ 0.24
COL19A1-205ENST00000620364 FKBP8Q14318 412 aa16.51■□□□□ 0.23
COL19A1-205ENST00000620364 RSF1Q96T23 1441 aaPredicted RBP16.51■□□□□ 0.23
COL19A1-205ENST00000620364 BAZ1BQ9UIG0 1483 aaKnown RBP16.47■□□□□ 0.23
COL19A1-205ENST00000620364 CLIP1P30622 1438 aa16.47■□□□□ 0.23
COL19A1-205ENST00000620364 MRS2Q9HD23 443 aa16.45■□□□□ 0.22
COL19A1-205ENST00000620364 ARXQ96QS3 562 aa16.45■□□□□ 0.22
COL19A1-205ENST00000620364 TRHP20396 242 aaPredicted RBP16.44■□□□□ 0.22
COL19A1-205ENST00000620364 RGL3Q3MIN7 710 aa16.44■□□□□ 0.22
COL19A1-205ENST00000620364 ACIN1Q9UKV3 1341 aaKnown RBP16.42■□□□□ 0.22
COL19A1-205ENST00000620364 CFDP1Q9UEE9 299 aaPredicted RBP16.41■□□□□ 0.22
COL19A1-205ENST00000620364 CCDC136Q96JN2 1154 aa16.41■□□□□ 0.22
COL19A1-205ENST00000620364 EIF4G2P78344 907 aaKnown RBP eCLIP16.39■□□□□ 0.21
COL19A1-205ENST00000620364 LMOD2Q6P5Q4 547 aa16.39■□□□□ 0.21
COL19A1-205ENST00000620364 PPM1GO15355 546 aaPredicted RBP16.38■□□□□ 0.21
COL19A1-205ENST00000620364 CFAP53Q96M91 514 aa16.38■□□□□ 0.21
COL19A1-205ENST00000620364 CDK11BP21127 795 aaKnown RBP16.37■□□□□ 0.21
COL19A1-205ENST00000620364 GOLGA3Q08378 1498 aa16.37■□□□□ 0.21
COL19A1-205ENST00000620364 HIRIP3Q9BW71 556 aaPredicted RBP16.36■□□□□ 0.21
COL19A1-205ENST00000620364 NACADO15069 1562 aa16.35■□□□□ 0.21
COL19A1-205ENST00000620364 POGKQ9P215 609 aa16.34■□□□□ 0.21
COL19A1-205ENST00000620364 CDCA8Q53HL2 280 aa16.33■□□□□ 0.21
COL19A1-205ENST00000620364 DCAF1Q9Y4B6 1507 aa16.33■□□□□ 0.2
COL19A1-205ENST00000620364 NPHP1O15259 732 aa16.33■□□□□ 0.2
COL19A1-205ENST00000620364 KIF27Q86VH2 1401 aa16.32■□□□□ 0.2
COL19A1-205ENST00000620364 KNSTRNQ9Y448 316 aa16.3■□□□□ 0.2
COL19A1-205ENST00000620364 WRNQ14191 1432 aaPredicted RBP eCLIP16.3■□□□□ 0.2
COL19A1-205ENST00000620364 EIF4G1Q04637 1599 aaKnown RBP16.3■□□□□ 0.2
COL19A1-205ENST00000620364 EEA1Q15075 1411 aa16.28■□□□□ 0.2
COL19A1-205ENST00000620364 MLECQ14165 292 aa16.26■□□□□ 0.19
COL19A1-205ENST00000620364 LAS1LQ9Y4W2 734 aaKnown RBP16.26■□□□□ 0.19
COL19A1-205ENST00000620364 CARD11Q9BXL7 1154 aa16.26■□□□□ 0.19
COL19A1-205ENST00000620364 MAPK8IP3Q9UPT6 1336 aa16.24■□□□□ 0.19
COL19A1-205ENST00000620364 KANK1Q14678 1352 aa16.23■□□□□ 0.19
COL19A1-205ENST00000620364 CEP162Q5TB80 1403 aa16.23■□□□□ 0.19
COL19A1-205ENST00000620364 IRX6P78412 446 aaPredicted RBP16.23■□□□□ 0.19
COL19A1-205ENST00000620364 HDGFP51858 240 aaKnown RBP16.21■□□□□ 0.19
COL19A1-205ENST00000620364 NUDCQ9Y266 331 aa16.2■□□□□ 0.18
COL19A1-205ENST00000620364 CCNB3Q8WWL7 1395 aa16.2■□□□□ 0.18
COL19A1-205ENST00000620364 CASC1Q6TDU7 716 aa16.2■□□□□ 0.18
COL19A1-205ENST00000620364 NCLP19338 710 aaKnown RBP16.2■□□□□ 0.18
COL19A1-205ENST00000620364 FTSJ3Q8IY81 847 aaKnown RBP16.19■□□□□ 0.18
COL19A1-205ENST00000620364 CEP164Q9UPV0 1460 aa16.17■□□□□ 0.18
COL19A1-205ENST00000620364 TULP1O00294 542 aaPredicted RBP16.17■□□□□ 0.18
COL19A1-205ENST00000620364 NEUROD2Q15784 382 aa16.17■□□□□ 0.18
COL19A1-205ENST00000620364 TNNT2P45379 298 aaPredicted RBP16.17■□□□□ 0.18
COL19A1-205ENST00000620364 NBR1Q14596 966 aa16.14■□□□□ 0.17
COL19A1-205ENST00000620364 SENP3-EIF4A1A0A087X0R7 540 aa16.13■□□□□ 0.17
COL19A1-205ENST00000620364 BECN1Q14457 450 aa16.13■□□□□ 0.17
COL19A1-205ENST00000620364 U2SURPO15042 1029 aaKnown RBP16.11■□□□□ 0.17
COL19A1-205ENST00000620364 OS9Q13438 667 aaPredicted RBP16.11■□□□□ 0.17
COL19A1-205ENST00000620364 PNNQ9H307 717 aaKnown RBP16.1■□□□□ 0.17
COL19A1-205ENST00000620364 CC2D1BQ5T0F9 858 aaKnown RBP16.1■□□□□ 0.17
COL19A1-205ENST00000620364 EIF5BO60841 1220 aaKnown RBP16.1■□□□□ 0.17
COL19A1-205ENST00000620364 GOLGA2Q08379 1002 aa16.1■□□□□ 0.17
COL19A1-205ENST00000620364 SOX12O15370 315 aa16.09■□□□□ 0.17
COL19A1-205ENST00000620364 ZRSR1Q15695 479 aaKnown RBP16.09■□□□□ 0.17
COL19A1-205ENST00000620364 DDRGK1Q96HY6 314 aa16.08■□□□□ 0.17
COL19A1-205ENST00000620364 SRPK2P78362 688 aaKnown RBP16.08■□□□□ 0.16
COL19A1-205ENST00000620364 MIER1Q8N108 512 aa16.08■□□□□ 0.16
COL19A1-205ENST00000620364 BAZ1AQ9NRL2 1556 aaPredicted RBP16.08■□□□□ 0.16
COL19A1-205ENST00000620364 CUX2O14529 1486 aa16.07■□□□□ 0.16
COL19A1-205ENST00000620364 TAOK2Q9UL54 1235 aa16.06■□□□□ 0.16
COL19A1-205ENST00000620364 GOLGA6L22H0YM25 854 aa16.06■□□□□ 0.16
COL19A1-205ENST00000620364 TPRNQ4KMQ1 711 aa16.05■□□□□ 0.16
COL19A1-205ENST00000620364 TNIKQ9UKE5 1360 aa16.05■□□□□ 0.16
COL19A1-205ENST00000620364 GGT6Q6P531 493 aa16.05■□□□□ 0.16
COL19A1-205ENST00000620364 FHAD1B1AJZ9 1412 aa16.05■□□□□ 0.16
COL19A1-205ENST00000620364 TMF1P82094 1093 aa16.04■□□□□ 0.16
COL19A1-205ENST00000620364 SAFB2Q14151 953 aaKnown RBP eCLIP16.04■□□□□ 0.16
COL19A1-205ENST00000620364 CARMIL1Q5VZK9 1371 aa16.04■□□□□ 0.16
COL19A1-205ENST00000620364 DCAF11Q8TEB1 546 aa16.04■□□□□ 0.16
COL19A1-205ENST00000620364 FRAT1Q92837 279 aaPredicted RBP16.03■□□□□ 0.16
COL19A1-205ENST00000620364 CARMIL2Q6F5E8 1435 aa16.02■□□□□ 0.15
COL19A1-205ENST00000620364 CHMP4BQ9H444 224 aaKnown RBP16.01■□□□□ 0.15
COL19A1-205ENST00000620364 STK26Q9P289 416 aa16■□□□□ 0.15
COL19A1-205ENST00000620364 PAK3O75914 559 aaPredicted RBP15.99■□□□□ 0.15
COL19A1-205ENST00000620364 SIN3AQ96ST3 1273 aa15.98■□□□□ 0.15
COL19A1-205ENST00000620364 PDS5BQ9NTI5 1447 aa15.98■□□□□ 0.15
COL19A1-205ENST00000620364 FGD1P98174 961 aa15.98■□□□□ 0.15
COL19A1-205ENST00000620364 NAP1L2Q9ULW6 460 aaPredicted RBP15.97■□□□□ 0.15
COL19A1-205ENST00000620364 MS4A1P11836 297 aa15.97■□□□□ 0.15
COL19A1-205ENST00000620364 MORC1Q86VD1 984 aa15.97■□□□□ 0.15
COL19A1-205ENST00000620364 RTF1Q92541 710 aaKnown RBP15.97■□□□□ 0.15
COL19A1-205ENST00000620364 CSB-PGBD3P0DP91 1061 aa15.96■□□□□ 0.15
COL19A1-205ENST00000620364 KCNJ4P48050 445 aa15.96■□□□□ 0.14
COL19A1-205ENST00000620364 HDGFL2Q7Z4V5 671 aaPredicted RBP15.96■□□□□ 0.14
COL19A1-205ENST00000620364 CCDC9Q9Y3X0 531 aaKnown RBP15.94■□□□□ 0.14
COL19A1-205ENST00000620364 TRIM44Q96DX7 344 aaPredicted RBP15.92■□□□□ 0.14
COL19A1-205ENST00000620364 ANP32EQ9BTT0 268 aa15.92■□□□□ 0.14
COL19A1-205ENST00000620364 ARHGAP35Q9NRY4 1499 aa15.91■□□□□ 0.14
COL19A1-205ENST00000620364 PTMAP06454 111 aaKnown RBP15.91■□□□□ 0.14
COL19A1-205ENST00000620364 ISY1Q9ULR0 285 aaKnown RBP15.91■□□□□ 0.14
COL19A1-205ENST00000620364 CECR2Q9BXF3 1484 aa15.9■□□□□ 0.14
COL19A1-205ENST00000620364 MYO15BQ96JP2 1530 aa15.89■□□□□ 0.13
COL19A1-205ENST00000620364 SOGA1O94964 1423 aa15.89■□□□□ 0.13
COL19A1-205ENST00000620364 RGS3P49796 1198 aa15.88■□□□□ 0.13
COL19A1-205ENST00000620364 SUPT16HQ9Y5B9 1047 aaKnown RBP15.88■□□□□ 0.13
COL19A1-205ENST00000620364 ZNF330Q9Y3S2 320 aaPredicted RBP15.88■□□□□ 0.13
COL19A1-205ENST00000620364 TMX4Q9H1E5 349 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms